Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0037G028 Amborella trichopoda HOM05D004831 ORTHO05D003975 0.0e+00 1275.8 648 100.0
Nn8g39278 Nelumbo nucifera HOM05D004831 ORTHO05D003975 1.4e-61 241.9 726 29.9
TAR374G0326 Trochodendron aralioides HOM05D004831 ORTHO05D003975 1.7e-56 224.9 735 30.2
TAR626G1756 Trochodendron aralioides HOM05D004831 ORTHO05D003975 1.7e-56 224.9 735 30.2
TAR383G0472 Trochodendron aralioides HOM05D004831 ORTHO05D003975 3.9e-56 223.8 732 31.7
MBI01_g10032_MAGBIO Magnolia biondii HOM05D004831 ORTHO05D003975 1.2e-54 218.8 689 31.5
Gorai.011G078100 Gossypium raimondii HOM05D004831 ORTHO05D003975 2.0e-52 211.5 747 29.7
QL05p025363 Quercus lobata HOM05D004831 ORTHO05D003975 4.4e-52 210.3 764 28.4
Gohir.D10G072500 Gossypium hirsutum HOM05D004831 ORTHO05D003975 1.3e-51 208.8 740 29.5
Gohir.A10G079000 Gossypium hirsutum HOM05D004831 ORTHO05D003975 2.2e-51 208.0 746 29.4
TWI18G0228 Tripterygium wilfordii HOM05D004831 ORTHO05D003975 5.4e-50 203.4 703 28.4
Manes.11G052100 Manihot esculenta HOM05D004831 ORTHO05D003975 1.3e-48 198.7 742 27.4
Thecc.06G083000 Theobroma cacao HOM05D004831 ORTHO05D003975 5.1e-48 196.8 746 28.2
Potri.003G056600 Populus trichocarpa HOM05D004831 ORTHO05D003975 2.5e-47 194.5 765 27.3
Sed0027172 Sechium edule HOM05D004831 ORTHO05D003975 3.3e-47 194.1 693 27.8
TWI12G0693 Tripterygium wilfordii HOM05D004831 ORTHO05D003975 4.3e-47 193.7 711 28.4
CANSAT56G2043 Cannabis sativa HOM05D004831 ORTHO05D003975 7.3e-47 193.0 754 28.0
CAN.G438.52 Capsicum annuum HOM05D004831 ORTHO05D003975 1.1e-45 189.1 717 27.6
CsaV3_7G033010 Cucumis sativus L. HOM05D004831 ORTHO05D003975 1.4e-45 188.7 738 27.0
Dinv30528 Davidia involucrata HOM05D004831 ORTHO05D003975 2.3e-45 188.0 763 27.9
ClCG09G002300 Citrullus lanatus HOM05D004831 ORTHO05D003975 1.2e-44 185.7 723 26.8
Potri.001G178200 Populus trichocarpa HOM05D004831 ORTHO05D003975 1.2e-44 185.7 714 28.4
Cc04_g03580 Coffea canephora HOM05D004831 ORTHO05D003975 2.0e-44 184.9 702 28.6
Actinidia01793 Actinidia chinensis HOM05D004831 ORTHO05D003975 2.6e-44 184.5 845 27.1
Eucgr.F03008 Eucalyptus grandis HOM05D004831 ORTHO05D003975 1.3e-43 182.2 694 28.8
Hund06602 Selenicereus undatus HOM05D004831 ORTHO05D003975 2.2e-43 181.4 771 28.1
Sopen03g039230 Solanum pennellii HOM05D004831 ORTHO05D003975 3.7e-43 180.6 724 26.2
Duzib235G0180 Durio zibethinus HOM05D004831 ORTHO05D003975 4.9e-43 180.3 722 28.0
Solyc03g120340.3 Solanum lycopersicum HOM05D004831 ORTHO05D003975 4.9e-43 180.3 729 25.8
Aa31LG7G15290 Aethionema arabicum HOM05D004831 ORTHO05D003975 1.9e-42 178.3 744 28.8
Lj5A62T33 Lonicera japonica HOM05D004831 ORTHO05D003975 2.4e-42 177.9 694 28.4
CARHR016160 Cardamine hirsuta HOM05D004831 ORTHO05D003975 3.2e-42 177.6 748 29.7
Sabra03G0032100 Salix brachista HOM05D004831 ORTHO05D003975 3.2e-42 177.6 762 27.0
MELO3C023366.2 Cucumis melo HOM05D004831 ORTHO05D003975 9.2e-42 176.0 723 26.6
Rhsim08G0218700 Rhododendron simsii HOM05D004831 ORTHO05D003975 9.2e-42 176.0 751 29.7
Lj3g0022365 Lotus japonicus HOM05D004831 ORTHO05D003975 1.2e-41 175.6 715 26.7
Ciclev10024870m.g Citrus clementina HOM05D004831 ORTHO05D003975 1.6e-41 175.3 890 26.5
Peaxi162Scf00015g00247 Petunia axillaris HOM05D004831 ORTHO05D003975 2.1e-41 174.9 753 27.0
arahy.Tifrunner.gnm1.ann1.5CE7DY Arachis hypogaea HOM05D004831 ORTHO05D003975 7.8e-41 172.9 607 28.2
Gohir.A09G084100 Gossypium hirsutum HOM05D004831 ORTHO05D003975 1.3e-40 172.2 668 30.1
PGSC0003DMG400002560 Solanum tuberosum HOM05D004831 ORTHO05D003975 1.7e-40 171.8 761 25.8
Aqoxy7G01849 Aquilegia oxysepala HOM05D004831 ORTHO05D003975 3.0e-40 171.0 724 28.9
CSS0014524 Camellia sinensis var. sinensis HOM05D004831 ORTHO05D003975 3.9e-40 170.6 655 28.1
Dinv38059 Davidia involucrata HOM05D004831 ORTHO05D003975 3.9e-40 170.6 734 27.0
Medtr6g068960 Medicago truncatula HOM05D004831 ORTHO05D003975 3.9e-40 170.6 629 28.3
EL10Ac9g21986 Beta vulgaris HOM05D004831 ORTHO05D003975 5.1e-40 170.2 712 27.7
AUR62016432 Chenopodium quinoa HOM05D004831 ORTHO05D003975 8.6e-40 169.5 666 28.7
Gorai.006G099900 Gossypium raimondii HOM05D004831 ORTHO05D003975 1.5e-39 168.7 670 28.7
AUR62011616 Chenopodium quinoa HOM05D004831 ORTHO05D003975 3.3e-39 167.5 694 27.5
Lsat_1_v5_gn_1_34820 Lactuca sativa HOM05D004831 ORTHO05D003975 3.3e-39 167.5 666 28.2
Ca_24215_v3 Cicer arietinum L. HOM05D004831 ORTHO05D003975 4.3e-39 167.2 723 26.6
Duzib160G0042 Durio zibethinus HOM05D004831 ORTHO05D003975 4.3e-39 167.2 684 28.5
Gohir.D09G083900 Gossypium hirsutum HOM05D004831 ORTHO05D003975 7.3e-39 166.4 668 29.6
vmacro18933 Vaccinium macrocarpon HOM05D004831 ORTHO05D003975 2.1e-38 164.9 696 28.2
Atru.chr1.3226 Acer truncatum HOM05D004831 ORTHO05D003975 2.8e-38 164.5 864 27.1
Ah.01g021180 Amaranthus hybridus HOM05D004831 ORTHO05D003975 3.6e-38 164.1 710 25.4
GSVIVG01017152001 Vitis vinifera HOM05D004831 ORTHO05D003975 4.7e-38 163.7 910 24.0
HanXRQChr02g0032681 Helianthus annuus HOM05D004831 ORTHO05D003975 6.2e-38 163.3 671 28.2
Aa31sc115G30 Aethionema arabicum HOM05D004831 ORTHO05D003975 1.4e-37 162.2 769 27.3
Prupe.3G073700 Prunus persica HOM05D004831 ORTHO05D003975 1.4e-37 162.2 752 25.9
HanXRQChr05g0163461 Helianthus annuus HOM05D004831 ORTHO05D003975 6.8e-37 159.8 670 27.3
Lalb_Chr24g0395761 Lupinus albus HOM05D004831 ORTHO05D003975 3.4e-36 157.5 713 25.0
Hma1.2p1_2171F.1_g315970 Hydrangea macrophylla HOM05D004831 ORTHO05D003975 2.2e-35 154.8 720 27.1
RcHm_v2.0_Chr2g0137511 Rosa chinensis HOM05D004831 ORTHO05D003975 6.4e-35 153.3 698 26.4
MSTRG.22702 Avicennia marina HOM05D004831 ORTHO05D003975 1.1e-34 152.5 696 26.4
CDE04G1285 Ceratophyllum demersum HOM05D004831 ORTHO05D003975 1.1e-34 152.5 812 26.8
AT1G15660 Arabidopsis thaliana HOM05D004831 ORTHO05D003975 1.4e-34 152.1 742 26.8
arahy.Tifrunner.gnm1.ann1.3B4S3M Arachis hypogaea HOM05D004831 ORTHO05D003975 2.4e-34 151.4 697 24.8
Glyma.15G013200 Glycine max HOM05D004831 ORTHO05D003975 3.2e-34 151.0 817 25.8
Medtr8g467560 Medicago truncatula HOM05D004831 ORTHO05D003975 1.2e-33 149.1 718 26.3
Nitab4.5_0003885g0040 Nicotiana tabacum HOM05D004831 ORTHO05D003975 2.1e-33 148.3 782 25.7
MD17G1197700 Malus domestica HOM05D004831 ORTHO05D003975 3.5e-33 147.5 644 27.3
Lalb_Chr15g0078831 Lupinus albus HOM05D004831 ORTHO05D003975 4.6e-33 147.1 630 26.0
Nitab4.5_0003159g0050 Nicotiana tabacum HOM05D004831 ORTHO05D003975 7.8e-33 146.4 799 24.5
Cpa.g.sc10.161 Carica papaya HOM05D004831 ORTHO05D003975 1.0e-32 146.0 848 25.0
Cfa002050 Carpinus fangiana HOM05D004831 ORTHO05D003975 1.3e-32 145.6 927 23.9
THA.LOC104812471 Tarenaya hassleriana HOM05D004831 ORTHO05D003975 6.6e-32 143.3 769 26.4
Glyma.13G360700 Glycine max HOM05D004831 ORTHO05D003975 1.1e-31 142.5 839 24.3
Actinidia15826 Actinidia chinensis HOM05D004831 ORTHO05D003975 1.5e-31 142.1 427 30.7
Carub.0001s1544 Capsella rubella HOM05D004831 ORTHO05D003975 1.5e-31 142.1 746 26.4
arahy.Tifrunner.gnm1.ann1.Y8U4CK Arachis hypogaea HOM05D004831 ORTHO05D003975 1.9e-31 141.7 704 23.9
FvH4_6g30920 Fragaria vesca HOM05D004831 ORTHO05D003975 5.6e-31 140.2 691 26.3
Sc15g0001240 Simmondsia chinensis HOM05D004831 ORTHO05D003975 5.6e-31 140.2 850 24.1
Sp1g13970 Schrenkiella parvula HOM05D004831 ORTHO05D003975 9.6e-31 139.4 757 26.2
A06p11680 Brassica napus HOM05D004831 ORTHO05D003975 2.1e-30 138.3 753 26.4
Phvul.002G299500 Phaseolus vulgaris HOM05D004831 ORTHO05D003975 2.8e-30 137.9 686 25.9
TPR.G31352 Trifolium pratense HOM05D004831 ORTHO05D003975 2.8e-30 137.9 859 25.3
BolC5t30118H Brassica oleracea HOM05D004831 ORTHO05D003975 2.4e-29 134.8 753 26.8
Oeu024063.2 Olea europaea HOM05D004831 ORTHO05D003975 2.4e-29 134.8 667 26.1
BcaC05g25641 Brassica carinata HOM05D004831 ORTHO05D003975 4.0e-29 134.0 751 26.9
FAN14G0810 Fragaria x ananassa HOM05D004831 ORTHO05D003975 5.3e-29 133.7 733 26.2
AL1G27760 Arabidopsis lyrata HOM05D004831 ORTHO05D003975 1.2e-28 132.5 748 25.3
Hma1.2p1_0323F.1_g125270 Hydrangea macrophylla HOM05D004831 ORTHO05D003975 2.0e-28 131.7 681 26.3
BraA06t24347Z Brassica rapa HOM05D004831 ORTHO05D003975 2.9e-27 127.9 758 26.3
Oeu021950.1 Olea europaea HOM05D004831 ORTHO05D003975 4.9e-27 127.1 775 25.4
Sed0009949 Sechium edule HOM05D004831 ORTHO05D003975 1.4e-26 125.6 514 27.6
FAN09G2060 Fragaria x ananassa HOM05D004831 ORTHO05D003975 1.9e-26 125.2 732 25.0
COL.COLO4_30332 Corchorus olitorius HOM05D004831 ORTHO05D003975 5.4e-26 123.6 340 30.0
CiPaw.02G152200 Carya illinoinensis HOM05D004831 ORTHO05D003975 1.2e-25 122.5 376 31.6
DCAR_026304 Daucus carota HOM05D004831 ORTHO05D003975 1.6e-25 122.1 640 24.2
SGA_v2.0_scaffold37G14809 Striga asiatica HOM05D004831 ORTHO05D003975 1.6e-25 122.1 765 25.1
Thhalv10006918m.g Eutrema salsugineum HOM05D004831 ORTHO05D003975 2.7e-25 121.3 783 25.4
Lsat_1_v5_gn_9_45780 Lactuca sativa HOM05D004831 ORTHO05D003975 3.6e-22 110.9 610 25.6
Hma1.2p1_0682F.1_g202670 Hydrangea macrophylla HOM05D004831 ORTHO05D003975 4.8e-22 110.5 633 26.2
ECA247G1173 Erigeron canadensis HOM05D004831 ORTHO05D003975 6.2e-22 110.2 688 24.9
PSO782G5420 Papaver somniferum HOM05D004831 ORTHO05D003975 6.2e-22 110.2 100 57.0
PSO063G2677 Papaver somniferum HOM05D004831 ORTHO05D003975 2.4e-21 108.2 107 55.1
Haze_16453 Corylus avellana HOM05D004831 ORTHO05D003975 3.1e-21 107.8 499 27.5
C05p13810 Brassica napus HOM05D004831 ORTHO05D012057 4.0e-21 107.5 702 25.8
Actinidia15827 Actinidia chinensis HOM05D004831 ORTHO05D003975 6.9e-21 106.7 95 57.9
BcaC05g25510 Brassica carinata HOM05D004831 ORTHO05D003975 1.5e-20 105.5 87 62.1
TAR624G1194 Trochodendron aralioides HOM05D004831 ORTHO05D003975 1.3e-19 102.4 120 49.2
Zm00001eb159780 Zea mays HOM05D018572 ORTHO05D003975 1.7e-19 102.1 641 24.0
Os01g0617700 Oryza sativa ssp. japonica HOM05D004831 ORTHO05D003975 2.9e-19 101.3 182 36.3
PGR102G0340 Punica granatum HOM05D004831 ORTHO05D003975 4.9e-19 100.5 373 29.0
HPP92_017895 Vanilla planifolia HOM05D004831 ORTHO05D003975 4.9e-19 100.5 779 23.0
Migut.I00846 Erythranthe guttata HOM05D004831 ORTHO05D003975 6.4e-19 100.1 381 28.9
COL.COLO4_30333 Corchorus olitorius HOM05D004831 ORTHO05D003975 1.4e-18 99.0 124 50.0
arahy.Tifrunner.gnm1.ann1.NQW8T9 Arachis hypogaea HOM05D004831 ORTHO05D003975 4.2e-18 97.4 188 34.0
DCAR_009558 Daucus carota HOM05D004831 ORTHO05D003975 4.2e-18 97.4 283 31.1
FAN02G3038 Fragaria x ananassa HOM05D004831 ORTHO05D003975 7.1e-18 96.7 161 39.8
unitig_62.g23772 Utricularia gibba HOM05D004831 ORTHO05D003975 9.3e-18 96.3 740 23.4
SHI09311 Sapria himalayana HOM05D004831 ORTHO05D003975 1.2e-17 95.9 128 46.1
AagrBONN_evm.TU.Sc2ySwM_368.483__484 Anthoceros agrestis HOM05D004831 ORTHO05D003975 1.0e-16 92.8 124 48.4
Phvul.005G172500 Phaseolus vulgaris HOM05D004831 ORTHO05D003975 1.0e-16 92.8 96 49.0
SMO203G0255 Selaginella moellendorffii HOM05D004831 ORTHO05D003975 5.1e-16 90.5 83 50.6
Zm00001eb358290 Zea mays HOM05D018572 ORTHO05D003975 1.5e-15 89.0 731 23.9
Pp3c2_32580 Physcomitrium patens HOM05D004831 ORTHO05D003975 9.6e-15 86.3 103 43.7
TPR.G24077 Trifolium pratense HOM05D004831 ORTHO05D003975 9.6e-15 86.3 111 45.0
Aa31LG7G300 Aethionema arabicum HOM05D004831 ORTHO05D003975 1.1e-13 82.8 142 42.3
Migut.I00847 Erythranthe guttata HOM05D004831 ORTHO05D003975 3.8e-11 74.3 113 41.6
Manes.04G121450 Manihot esculenta HOM05D004831 ORTHO05D003975 6.4e-11 73.6 366 25.4
SEGI_34595 Sequoiadendron giganteum HOM05D004831 ORTHO05D003975 1.9e-10 72.0 51 64.7
Mapoly0008s0161 Marchantia polymorpha HOM05D004831 ORTHO05D003975 5.5e-10 70.5 111 43.2
Pp3c5_11060 Physcomitrium patens HOM05D004831 ORTHO05D003975 9.3e-10 69.7 85 43.5
Cre02.g079250 Chlamydomonas reinhardtii HOM05D004831 ORTHO05D003975 3.0e-08 64.7 72 51.4
ClCG05G013830 Citrullus lanatus HOM05D004831 ORTHO05D003975 7.4e-07 60.1 255 25.5


User provided reference genes

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