Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0030G048 Amborella trichopoda HOM05D006600 ORTHO05D008446 4.3e-168 594.7 334 100.0
QL12p037547 Quercus lobata HOM05D006600 ORTHO05D008446 3.2e-123 445.7 333 65.5
PSO541G2868 Papaver somniferum HOM05D006600 ORTHO05D008446 1.4e-121 440.3 332 71.4
CiPaw.08G048500 Carya illinoinensis HOM05D006600 ORTHO05D008446 1.8e-121 439.9 332 65.1
Sabra14G0012400 Salix brachista HOM05D006600 ORTHO05D008446 3.9e-121 438.7 332 63.0
PSO675G8764 Papaver somniferum HOM05D006600 ORTHO05D008446 6.7e-121 438.0 332 64.2
Cfa013668 Carpinus fangiana HOM05D006600 ORTHO05D008446 8.8e-121 437.6 333 78.1
Ah.15g092540 Amaranthus hybridus HOM05D006600 ORTHO05D008446 2.5e-120 436.0 331 63.7
MBI16_g13383_MAGBIO Magnolia biondii HOM05D006600 ORTHO05D008446 2.5e-120 436.0 329 65.0
Oeu050861.1 Olea europaea HOM05D006600 ORTHO05D008446 7.4e-120 434.5 329 65.3
Prupe.1G425800 Prunus persica HOM05D006600 ORTHO05D008446 7.4e-120 434.5 331 77.3
AUR62038783 Chenopodium quinoa HOM05D006600 ORTHO05D008446 9.7e-120 434.1 331 62.5
Thecc.08G092000 Theobroma cacao HOM05D006600 ORTHO05D008446 9.7e-120 434.1 328 68.6
THA.LOC104807092 Tarenaya hassleriana HOM05D006600 ORTHO05D008446 1.3e-119 433.7 331 64.0
Lj1g0008642 Lotus japonicus HOM05D006600 ORTHO05D008446 1.7e-119 433.3 331 77.0
AUR62037454 Chenopodium quinoa HOM05D006600 ORTHO05D008446 2.8e-119 432.6 329 62.9
Psat5g038240 Pisum sativum HOM05D006600 ORTHO05D008446 2.8e-119 432.6 328 63.1
unitig_62.g23648 Utricularia gibba HOM05D006600 ORTHO05D008446 3.7e-119 432.2 328 63.1
Rhsim07G0222000 Rhododendron simsii HOM05D006600 ORTHO05D008446 8.2e-119 431.0 332 74.7
Sopen04g031730 Solanum pennellii HOM05D006600 ORTHO05D008446 8.2e-119 431.0 330 66.7
TPR.G33718 Trifolium pratense HOM05D006600 ORTHO05D008446 3.1e-118 429.1 328 61.6
Gorai.009G217900 Gossypium raimondii HOM05D006600 ORTHO05D008446 5.3e-118 428.3 329 77.5
Dinv44978 Davidia involucrata HOM05D006600 ORTHO05D008446 6.9e-118 427.9 331 76.1
CSS0036700 Camellia sinensis var. sinensis HOM05D006600 ORTHO05D008446 9.1e-118 427.6 332 75.6
TWI56G0382 Tripterygium wilfordii HOM05D006600 ORTHO05D008446 9.1e-118 427.6 329 77.5
Medtr3g102800 Medicago truncatula HOM05D006600 ORTHO05D008446 1.2e-117 427.2 328 62.2
CsaV3_2G026260 Cucumis sativus L. HOM05D006600 ORTHO05D008446 1.5e-117 426.8 333 75.4
HanXRQChr10g0304021 Helianthus annuus HOM05D006600 ORTHO05D008446 2.0e-117 426.4 331 61.9
ClCG08G016350 Citrullus lanatus HOM05D006600 ORTHO05D008446 4.5e-117 425.2 333 76.0
Gohir.A05G207900 Gossypium hirsutum HOM05D006600 ORTHO05D008446 4.5e-117 425.2 329 77.2
Sed0004073 Sechium edule HOM05D006600 ORTHO05D008446 4.5e-117 425.2 332 75.3
arahy.Tifrunner.gnm1.ann1.H62KW4 Arachis hypogaea HOM05D006600 ORTHO05D008446 5.9e-117 424.9 331 75.8
SGA_v2.0_scaffold244G44349 Striga asiatica HOM05D006600 ORTHO05D008446 7.7e-117 424.5 328 61.9
arahy.Tifrunner.gnm1.ann1.UTGV4K Arachis hypogaea HOM05D006600 ORTHO05D008446 1.0e-116 424.1 331 75.5
MD08G1088100 Malus domestica HOM05D006600 ORTHO05D008446 1.0e-116 424.1 332 76.2
Nitab4.5_0000934g0020 Nicotiana tabacum HOM05D006600 ORTHO05D008446 1.0e-116 424.1 329 62.9
Ca_15912_v3 Cicer arietinum L. HOM05D006600 ORTHO05D008446 1.3e-116 423.7 329 73.6
Cc10_g05550 Coffea canephora HOM05D006600 ORTHO05D008446 3.8e-116 422.2 332 75.3
Gohir.D05G211400 Gossypium hirsutum HOM05D006600 ORTHO05D008446 3.8e-116 422.2 329 76.9
Nitab4.5_0003228g0070 Nicotiana tabacum HOM05D006600 ORTHO05D008446 3.8e-116 422.2 329 63.2
Atru.chr13.803 Acer truncatum HOM05D006600 ORTHO05D008446 5.0e-116 421.8 330 75.5
MSTRG.1040 Avicennia marina HOM05D006600 ORTHO05D008446 5.0e-116 421.8 329 72.6
Solyc04g078120.3 Solanum lycopersicum HOM05D006600 ORTHO05D008446 5.0e-116 421.8 330 66.1
CDE04G0491 Ceratophyllum demersum HOM05D006600 ORTHO05D008446 6.5e-116 421.4 328 61.6
vmacro04585 Vaccinium macrocarpon HOM05D006600 ORTHO05D008446 8.5e-116 421.0 328 76.2
Glyma.04G044500 Glycine max HOM05D006600 ORTHO05D008446 1.1e-115 420.6 327 61.8
Manes.18G044200 Manihot esculenta HOM05D006600 ORTHO05D008446 1.1e-115 420.6 332 62.0
Ciclev10001599m.g Citrus clementina HOM05D006600 ORTHO05D008446 2.5e-115 419.5 329 75.7
PGR083G0558 Punica granatum HOM05D006600 ORTHO05D008446 2.5e-115 419.5 331 74.9
Glyma.06G045000 Glycine max HOM05D006600 ORTHO05D008446 3.2e-115 419.1 330 74.8
Phvul.009G070400 Phaseolus vulgaris HOM05D006600 ORTHO05D008446 4.2e-115 418.7 330 74.5
TAR625G0631 Trochodendron aralioides HOM05D006600 ORTHO05D008446 5.5e-115 418.3 328 75.6
Lalb_Chr23g0267431 Lupinus albus HOM05D006600 ORTHO05D008446 7.2e-115 417.9 332 73.2
Os03g0761200 Oryza sativa ssp. japonica HOM05D006600 ORTHO05D008446 9.4e-115 417.5 327 59.6
VMungo1309G2568 Vigna mungo HOM05D006600 ORTHO05D008446 9.4e-115 417.5 330 74.5
DCAR_020080 Daucus carota HOM05D006600 ORTHO05D008446 1.6e-114 416.8 322 75.5
MELO3C010818.2 Cucumis melo HOM05D006600 ORTHO05D008446 2.1e-114 416.4 333 74.5
SalBow7G4697 Salvia bowleyana HOM05D006600 ORTHO05D008446 2.1e-114 416.4 329 74.5
Peaxi162Scf00081g00125 Petunia axillaris HOM05D006600 ORTHO05D008446 2.7e-114 416.0 329 74.8
FAN20G2273 Fragaria x ananassa HOM05D006600 ORTHO05D008446 6.1e-114 414.8 331 68.3
Migut.C00501 Erythranthe guttata HOM05D006600 ORTHO05D008446 7.9e-114 414.5 328 74.1
Hma1.2p1_0923F.1_g236990 Hydrangea macrophylla HOM05D006600 ORTHO05D008446 7.9e-114 414.5 328 75.3
SEGI_28402 Sequoiadendron giganteum HOM05D006600 ORTHO05D008446 1.0e-113 414.1 324 75.9
PGSC0003DMG400021533 Solanum tuberosum HOM05D006600 ORTHO05D008446 1.8e-113 413.3 330 72.7
Lsat_1_v5_gn_6_112481 Lactuca sativa HOM05D006600 ORTHO05D008446 3.9e-113 412.1 326 74.8
FvH4_2g33350 Fragaria vesca HOM05D006600 ORTHO05D008446 1.1e-112 410.6 331 73.7
FAN15G1504 Fragaria x ananassa HOM05D006600 ORTHO05D008446 1.1e-112 410.6 331 74.0
Haze_22302 Corylus avellana HOM05D006600 ORTHO05D008446 1.5e-112 410.2 333 73.9
FAN24G1058 Fragaria x ananassa HOM05D006600 ORTHO05D008446 1.5e-112 410.2 331 73.7
HPP92_018760 Vanilla planifolia HOM05D006600 ORTHO05D008446 2.6e-112 409.5 324 60.2
Actinidia38095 Actinidia chinensis HOM05D006600 ORTHO05D008446 4.4e-112 408.7 326 75.2
Aqoxy6G02751 Aquilegia oxysepala HOM05D006600 ORTHO05D008446 5.7e-112 408.3 330 73.9
CANSAT35G1599 Cannabis sativa HOM05D006600 ORTHO05D008446 1.3e-111 407.1 332 74.7
Eucgr.F00122 Eucalyptus grandis HOM05D006600 ORTHO05D008446 2.8e-111 406.0 331 73.7
Zm00001eb214310 Zea mays HOM05D006600 ORTHO05D008446 6.3e-111 404.8 329 58.7
AT5G65860 Arabidopsis thaliana HOM05D006600 ORTHO05D008446 8.2e-111 404.4 331 66.8
RcHm_v2.0_Chr6g0309231 Rosa chinensis HOM05D006600 ORTHO05D008446 8.2e-111 404.4 331 73.7
Thhalv10005718m.g Eutrema salsugineum HOM05D006600 ORTHO05D008446 1.4e-110 403.7 331 64.0
Carub.0008s2674 Capsella rubella HOM05D006600 ORTHO05D008446 1.8e-110 403.3 330 72.7
Lj4A761T87 Lonicera japonica HOM05D006600 ORTHO05D008446 2.4e-110 402.9 241 76.3
EL10As7g23812 Beta vulgaris HOM05D006600 ORTHO05D008446 5.3e-110 401.7 375 64.3
BcaB02g09901 Brassica carinata HOM05D006600 ORTHO05D008446 2.0e-109 399.8 331 59.2
BolC3t18247H Brassica oleracea HOM05D006600 ORTHO05D008446 2.0e-109 399.8 331 59.5
GSVIVG01009372001 Vitis vinifera HOM05D006600 ORTHO05D008446 2.6e-109 399.4 241 75.9
CARHR279850 Cardamine hirsuta HOM05D006600 ORTHO05D008446 7.7e-109 397.9 337 70.0
Sp2g28940 Schrenkiella parvula HOM05D006600 ORTHO05D008446 1.0e-108 397.5 331 71.9
C03p59830 Brassica napus HOM05D006600 ORTHO05D008446 2.2e-108 396.4 331 58.9
BraA06t26199Z Brassica rapa HOM05D006600 ORTHO05D008446 2.2e-108 396.4 331 58.9
A06p32700 Brassica napus HOM05D006600 ORTHO05D008446 3.8e-108 395.6 331 58.9
CAN.G1054.24 Capsicum annuum HOM05D006600 ORTHO05D008446 3.8e-108 395.6 240 74.6
FAN27G3009 Fragaria x ananassa HOM05D006600 ORTHO05D008446 5.0e-108 395.2 331 71.9
Cpa.g.sc21.115 Carica papaya HOM05D006600 ORTHO05D008446 1.8e-105 386.7 241 74.3
BcaC01g02830 Brassica carinata HOM05D006600 ORTHO05D008446 1.3e-100 370.5 240 71.7
SMO228G0045 Selaginella moellendorffii HOM05D006600 ORTHO05D008446 1.9e-99 366.7 327 54.7
AagrBONN_evm.TU.Sc2ySwM_228.1907 Anthoceros agrestis HOM05D006600 ORTHO05D008446 3.6e-98 362.5 326 68.4
Mapoly0063s0069 Marchantia polymorpha HOM05D006600 ORTHO05D008446 2.3e-97 359.8 325 66.2
COL.COLO4_28538 Corchorus olitorius HOM05D006600 ORTHO05D008446 9.8e-96 354.4 339 54.6
Aa31LG1G16240 Aethionema arabicum HOM05D006600 ORTHO05D008446 3.7e-95 352.4 317 69.7
Nn1g04625 Nelumbo nucifera HOM05D006600 ORTHO05D008446 3.1e-94 349.4 332 67.8
Duzib093G2027 Durio zibethinus HOM05D006600 ORTHO05D008446 1.1e-86 324.3 265 60.8
Potri.014G019000 Populus trichocarpa HOM05D006600 ORTHO05D008446 1.5e-83 313.9 268 74.6
Hma1.2p1_0923F.1_g236980 Hydrangea macrophylla HOM05D006600 ORTHO05D008446 2.8e-82 309.7 278 73.0
COL.COLO4_28541 Corchorus olitorius HOM05D006600 ORTHO05D008446 2.0e-80 303.5 252 62.3
ECA246G2737 Erigeron canadensis HOM05D006600 ORTHO05D008446 4.4e-80 302.4 275 70.2
Sc26g0004110 Simmondsia chinensis HOM05D006600 ORTHO05D008446 6.2e-74 282.0 255 72.9
Cre01.g050050 Chlamydomonas reinhardtii HOM05D006600 ORTHO05D008446 1.9e-70 270.4 374 39.3
AL8G43570 Arabidopsis lyrata HOM05D006600 ORTHO05D008446 2.3e-68 263.5 257 69.6
MCO09G534 Micromonas commoda HOM05D006600 ORTHO05D008446 3.4e-64 249.6 342 47.7
Pp3c17_19880 Physcomitrium patens HOM05D006600 ORTHO05D008446 4.1e-62 242.7 257 66.9
CBR_g40512 Chara braunii HOM05D000409 ORTHO05D000184 2.3e-57 226.9 183 57.4
BcaC01g02829 Brassica carinata HOM05D006600 ORTHO05D008446 1.2e-56 224.6 234 50.9
MD15G1072900 Malus domestica HOM05D006600 ORTHO05D008446 1.3e-55 221.1 196 57.1
TAR624G0301 Trochodendron aralioides HOM05D006600 ORTHO05D008446 2.8e-50 203.4 144 66.7
CDE07G1425 Ceratophyllum demersum HOM05D006600 ORTHO05D008446 8.4e-47 191.8 127 67.7
TAR374G0485 Trochodendron aralioides HOM05D000474 ORTHO05D003648 1.1e-41 174.9 117 66.7
Actinidia08258 Actinidia chinensis HOM05D006600 ORTHO05D008446 3.0e-36 156.8 99 71.7
Oeu040380.1 Olea europaea HOM05D006600 ORTHO05D008446 1.2e-16 91.7 92 53.3
MBI16_g35586_MAGBIO Magnolia biondii HOM05D006600 ORTHO05D001493 1.5e-16 91.3 58 70.7
Dinv39240 Davidia involucrata HOM05D006600 ORTHO05D008446 1.1e-06 58.5 39 71.8


User provided reference genes

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