Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0030G005 Amborella trichopoda HOM05D006481 ORTHO05D008160 0.0e+00 1315.8 786 100.0
TAR376G0872 Trochodendron aralioides HOM05D006481 ORTHO05D008160 6.4e-106 389.4 860 41.2
Manes.10G058310 Manihot esculenta HOM05D006481 ORTHO05D008160 4.6e-104 383.3 797 41.3
Dinv15788 Davidia involucrata HOM05D006481 ORTHO05D008160 3.7e-101 373.6 824 41.6
Dinv42219 Davidia involucrata HOM05D006481 ORTHO05D008160 2.4e-100 370.9 840 40.4
CSS0020952 Camellia sinensis var. sinensis HOM05D006481 ORTHO05D008160 4.0e-100 370.2 868 40.7
CSS0029586 Camellia sinensis var. sinensis HOM05D006481 ORTHO05D008160 4.5e-99 366.7 868 40.3
Cfa004657 Carpinus fangiana HOM05D006481 ORTHO05D008160 4.9e-98 363.2 897 36.6
Actinidia34372 Actinidia chinensis HOM05D006481 ORTHO05D008160 2.1e-96 357.8 839 40.3
CiPaw.05G015400 Carya illinoinensis HOM05D006481 ORTHO05D008160 6.0e-96 356.3 791 36.3
QL11p031947 Quercus lobata HOM05D006481 ORTHO05D008160 2.3e-95 354.4 460 52.8
Thecc.02G113600 Theobroma cacao HOM05D006481 ORTHO05D008160 1.5e-94 351.7 789 41.3
TWI14G1262 Tripterygium wilfordii HOM05D006481 ORTHO05D008160 1.5e-94 351.7 827 37.5
Gohir.D12G020600 Gossypium hirsutum HOM05D006481 ORTHO05D008160 1.9e-94 351.3 779 39.8
Duzib132G1015 Durio zibethinus HOM05D006481 ORTHO05D008160 3.3e-94 350.5 815 40.0
Gorai.008G021000 Gossypium raimondii HOM05D006481 ORTHO05D008160 5.7e-94 349.7 819 41.0
MD05G1096200 Malus domestica HOM05D006481 ORTHO05D008160 3.7e-93 347.1 402 54.2
Lalb_Chr02g0145111 Lupinus albus HOM05D006481 ORTHO05D008160 8.2e-93 345.9 812 41.3
COL.COLO4_32543 Corchorus olitorius HOM05D006481 ORTHO05D008160 1.5e-91 341.7 777 37.7
Ca_11047_v3 Cicer arietinum L. HOM05D006481 ORTHO05D008160 3.4e-91 340.5 779 40.7
Haze_10252 Corylus avellana HOM05D006481 ORTHO05D008160 3.8e-90 337.0 891 36.5
Medtr1g106795 Medicago truncatula HOM05D006481 ORTHO05D008160 3.2e-89 334.0 786 42.5
TPR.G27130 Trifolium pratense HOM05D006481 ORTHO05D008160 9.3e-89 332.4 778 42.9
Sed0008985 Sechium edule HOM05D006481 ORTHO05D008160 1.6e-88 331.6 575 42.8
Nitab4.5_0001105g0200 Nicotiana tabacum HOM05D006481 ORTHO05D008160 3.5e-88 330.5 779 38.4
Potri.001G296700 Populus trichocarpa HOM05D006481 ORTHO05D008160 6.1e-88 329.7 786 38.8
Lj5g0022753 Lotus japonicus HOM05D006481 ORTHO05D008160 3.0e-87 327.4 789 38.0
FAN27G2785 Fragaria x ananassa HOM05D006481 ORTHO05D008160 3.9e-87 327.0 474 48.7
Glyma.20G132200 Glycine max HOM05D006481 ORTHO05D008160 6.7e-87 326.2 803 41.6
Cpa.g.sc106.79 Carica papaya HOM05D006481 ORTHO05D008160 8.7e-87 325.9 471 47.8
FAN15G2146 Fragaria x ananassa HOM05D006481 ORTHO05D008160 1.9e-86 324.7 474 48.3
FvH4_2g03900 Fragaria vesca HOM05D006481 ORTHO05D008160 2.5e-86 324.3 474 48.5
Potri.009G090900 Populus trichocarpa HOM05D006481 ORTHO05D008160 2.5e-86 324.3 781 37.6
Aqoxy6G02732 Aquilegia oxysepala HOM05D006481 ORTHO05D008160 3.3e-86 323.9 463 48.6
MELO3C017986.2 Cucumis melo HOM05D006481 ORTHO05D008160 1.3e-85 322.0 792 35.5
Gohir.A12G020400 Gossypium hirsutum HOM05D006481 ORTHO05D008160 1.3e-85 322.0 964 33.4
Prupe.8G140600 Prunus persica HOM05D006481 ORTHO05D008160 3.7e-85 320.5 830 38.0
Nitab4.5_0004685g0050 Nicotiana tabacum HOM05D006481 ORTHO05D008160 6.3e-85 319.7 799 39.0
PSO675G3182 Papaver somniferum HOM05D006481 ORTHO05D008160 9.0e-84 315.8 455 49.0
Sopen01g049510 Solanum pennellii HOM05D006481 ORTHO05D008160 2.0e-83 314.7 866 36.6
GSVIVG01037865001 Vitis vinifera HOM05D006481 ORTHO05D008160 4.5e-83 313.5 470 46.6
Phvul.007G043300 Phaseolus vulgaris HOM05D006481 ORTHO05D008160 5.9e-83 313.2 792 40.9
Oeu021369.1 Olea europaea HOM05D006481 ORTHO05D008160 1.0e-82 312.4 807 38.7
Solyc01g107260.4 Solanum lycopersicum HOM05D006481 ORTHO05D008160 1.7e-82 311.6 873 36.7
DCAR_021965 Daucus carota HOM05D006481 ORTHO05D008160 2.9e-82 310.8 904 31.9
Ah.14g085520 Amaranthus hybridus HOM05D006481 ORTHO05D008160 3.8e-82 310.5 812 36.1
VMungo0720G0067 Vigna mungo HOM05D006481 ORTHO05D008160 5.0e-82 310.1 808 35.8
PSO541G1903 Papaver somniferum HOM05D006481 ORTHO05D008160 1.1e-81 308.9 455 48.4
CAN.G606.42 Capsicum annuum HOM05D006481 ORTHO05D008160 4.2e-81 307.0 927 37.0
Psat6g216240 Pisum sativum HOM05D006481 ORTHO05D008160 1.2e-80 305.4 403 50.6
MSTRG.16692 Avicennia marina HOM05D006481 ORTHO05D008160 2.1e-80 304.7 833 37.9
Os03g0604600 Oryza sativa ssp. japonica HOM05D006481 ORTHO05D008160 7.9e-80 302.8 447 45.9
vmacro01976 Vaccinium macrocarpon HOM05D006481 ORTHO05D008160 1.0e-79 302.4 614 40.7
RcHm_v2.0_Chr6g0252931 Rosa chinensis HOM05D006481 ORTHO05D008160 1.4e-79 302.0 803 38.5
arahy.Tifrunner.gnm1.ann1.IH69Y8 Arachis hypogaea HOM05D006481 ORTHO05D008160 3.0e-79 300.8 812 34.2
Cc02_g30880 Coffea canephora HOM05D006481 ORTHO05D008160 3.0e-79 300.8 409 49.9
CsaV3_4G000490 Cucumis sativus L. HOM05D006481 ORTHO05D008160 5.1e-79 300.1 781 36.0
Atru.BG.62.p Acer truncatum HOM05D006481 ORTHO05D008160 1.5e-78 298.5 444 47.3
arahy.Tifrunner.gnm1.ann1.RQ9967 Arachis hypogaea HOM05D006481 ORTHO05D008160 1.5e-78 298.5 820 34.1
THA.LOC104825834 Tarenaya hassleriana HOM05D006481 ORTHO05D008160 4.3e-78 297.0 407 49.9
Lj5A217G88 Lonicera japonica HOM05D006481 ORTHO05D008160 9.7e-78 295.8 834 37.3
Sabra16G0185800 Salix brachista HOM05D006481 ORTHO05D008160 9.7e-78 295.8 423 48.9
AL1G57410 Arabidopsis lyrata HOM05D006481 ORTHO05D008160 1.3e-77 295.4 389 50.6
unitig_744.g24217 Utricularia gibba HOM05D006481 ORTHO05D008160 2.8e-77 294.3 556 40.8
EL10Ac8g19363 Beta vulgaris HOM05D006481 ORTHO05D008160 4.8e-77 293.5 569 40.9
Ciclev10027845m.g Citrus clementina HOM05D006481 ORTHO05D008160 8.2e-77 292.7 833 33.1
Aa31LG10G4220 Aethionema arabicum HOM05D006481 ORTHO05D008160 5.3e-76 290.0 470 45.3
AUR62031332 Chenopodium quinoa HOM05D006481 ORTHO05D008160 5.3e-76 290.0 607 40.2
AUR62027350 Chenopodium quinoa HOM05D006481 ORTHO05D008160 5.9e-75 286.6 565 41.2
Thhalv10011233m.g Eutrema salsugineum HOM05D006481 ORTHO05D008160 7.7e-75 286.2 389 49.6
ClCG10G010570 Citrullus lanatus HOM05D006481 ORTHO05D008160 1.3e-74 285.4 572 39.5
Migut.B00421 Erythranthe guttata HOM05D006481 ORTHO05D008160 8.5e-74 282.7 574 38.3
Sabra09G0070200 Salix brachista HOM05D006481 ORTHO05D008160 1.1e-73 282.3 766 36.0
SalBow6G0734 Salvia bowleyana HOM05D006481 ORTHO05D008160 1.1e-73 282.3 800 36.4
TAR628G0609 Trochodendron aralioides HOM05D006481 ORTHO05D008160 1.1e-73 282.3 412 48.8
AT1G49870 Arabidopsis thaliana HOM05D006481 ORTHO05D008160 3.2e-73 280.8 390 48.7
Sp1g36750 Schrenkiella parvula HOM05D006481 ORTHO05D008160 3.2e-73 280.8 608 41.0
CARHR039920 Cardamine hirsuta HOM05D006481 ORTHO05D008160 1.6e-72 278.5 378 49.2
Zm00001eb050130 Zea mays HOM05D006481 ORTHO05D008160 2.7e-72 277.7 824 40.2
BcaB04g17289 Brassica carinata HOM05D006481 ORTHO05D008160 6.1e-72 276.6 392 47.7
Carub.0001s3908 Capsella rubella HOM05D006481 ORTHO05D008160 6.1e-72 276.6 628 37.1
HPP92_017760 Vanilla planifolia HOM05D006481 ORTHO05D008160 6.1e-72 276.6 408 45.3
A08p03520 Brassica napus HOM05D006481 ORTHO05D008160 4.8e-69 266.9 394 49.2
BolC8t47171H Brassica oleracea HOM05D006481 ORTHO05D008160 4.8e-69 266.9 393 47.8
C08p03680 Brassica napus HOM05D006481 ORTHO05D008160 3.5e-67 260.8 382 47.9
RhsimUnG0125900 Rhododendron simsii HOM05D006481 ORTHO05D008160 5.9e-67 260.0 842 35.9
BraA08t32385Z Brassica rapa HOM05D006481 ORTHO05D008160 1.3e-66 258.8 394 48.2
HanXRQChr16g0514441 Helianthus annuus HOM05D006481 ORTHO05D008160 1.3e-66 258.8 385 46.5
Peaxi162Scf00016g02732 Petunia axillaris HOM05D006481 ORTHO05D008160 3.2e-65 254.2 580 37.4
Rhsim11G0154700 Rhododendron simsii HOM05D006481 ORTHO05D008160 4.2e-65 253.8 796 36.2
Lsat_1_v5_gn_5_114361 Lactuca sativa HOM05D006481 ORTHO05D008160 4.7e-64 250.4 400 45.0
ECA234G0568 Erigeron canadensis HOM05D006481 ORTHO05D008160 4.0e-63 247.3 414 42.3
SGA_v2.0_scaffold225G43011 Striga asiatica HOM05D006481 ORTHO05D008160 8.2e-61 239.6 408 41.7
PGSC0003DMG400025848 Solanum tuberosum HOM05D006481 ORTHO05D008160 1.7e-58 231.9 511 39.1
SEGI_11188 Sequoiadendron giganteum HOM05D006481 ORTHO05D008160 1.9e-57 228.4 394 40.9
SEGI_37018 Sequoiadendron giganteum HOM05D006481 ORTHO05D008160 7.2e-57 226.5 605 35.0
Eucgr.I01079 Eucalyptus grandis HOM05D006481 ORTHO05D008160 3.5e-51 207.6 751 35.7
SEGI_25924 Sequoiadendron giganteum HOM05D006481 ORTHO05D008160 1.2e-40 172.6 385 37.7
CDE04G1272 Ceratophyllum demersum HOM05D006481 ORTHO05D008160 3.4e-38 164.5 358 37.4
Pp3c18_18840 Physcomitrium patens HOM05D006481 ORTHO05D008160 1.1e-36 159.5 368 38.0
MD10G1102400 Malus domestica HOM05D006481 ORTHO05D008160 1.0e-34 152.9 149 58.4
SMO196G0099 Selaginella moellendorffii HOM05D006481 ORTHO05D008160 6.2e-32 143.7 375 33.9
SHI05066 Sapria himalayana HOM05D006481 ORTHO05D008160 4.3e-25 120.9 131 58.0
Sc14g0002570 Simmondsia chinensis HOM05D006481 ORTHO05D008160 6.2e-24 117.1 680 25.7
CBR_g49330 Chara braunii HOM05D006481 ORTHO05D008160 2.6e-22 111.7 167 43.1
FAN20G1292 Fragaria x ananassa HOM05D006481 ORTHO05D008160 1.7e-13 82.4 200 36.0
EL10Ac6g13964 Beta vulgaris HOM05D006481 ORTHO05D008160 1.6e-11 75.9 203 36.0
Atru.chr5.2411 Acer truncatum HOM05D006481 ORTHO05D008160 1.7e-10 72.4 45 75.6
MD10G1102500 Malus domestica HOM05D006481 ORTHO05D008160 3.3e-09 68.2 137 39.4
Hma1.2p1_1361F.1_g278150 Hydrangea macrophylla HOM05D006481 ORTHO05D008160 1.6e-08 65.9 161 36.6
TAR628G0206 Trochodendron aralioides HOM05D006481 ORTHO05D008160 2.8e-08 65.1 395 32.7
RcHm_v2.0_Chr6g0252961 Rosa chinensis HOM05D006481 ORTHO05D008160 1.1e-07 63.2 45 66.7
Hma1.2p1_0000F.1_g001000 Hydrangea macrophylla HOM05D006481 ORTHO05D008160 4.0e-07 61.2 220 35.9
Hma1.2p1_0883F.1_g232290 Hydrangea macrophylla HOM05D006481 ORTHO05D008160 5.8e-06 57.4 45 71.1
BcaC05g27423 Brassica carinata HOM05D006481 ORTHO05D008160 7.6e-06 57.0 56 51.8


User provided reference genes

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