Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0026G047 Amborella trichopoda HOM05D000181 ORTHO05D038347 1.6e-109 399.4 207 100.0
HPP92_007658 Vanilla planifolia HOM05D000181 ORTHO05D004115 6.6e-34 148.3 119 68.1
MBI01_g20326_MAGBIO Magnolia biondii HOM05D000181 ORTHO05D004115 2.5e-33 146.4 120 64.2
Dinv22890 Davidia involucrata HOM05D000181 ORTHO05D004115 3.6e-32 142.5 120 63.3
TAR624G0593 Trochodendron aralioides HOM05D000181 ORTHO05D004115 3.6e-32 142.5 120 65.0
TAR636G0478 Trochodendron aralioides HOM05D000181 ORTHO05D004115 6.2e-32 141.7 117 64.1
MBI04_g31158_MAGBIO Magnolia biondii HOM05D000181 ORTHO05D004115 3.4e-30 136.0 163 49.7
Lj7A267T34 Lonicera japonica HOM05D000181 ORTHO05D004115 1.3e-29 134.0 119 61.3
CiPaw.15G037900 Carya illinoinensis HOM05D000181 ORTHO05D004115 2.2e-29 133.3 117 62.4
Hma1.2p1_0055F.1_g031460 Hydrangea macrophylla HOM05D000181 ORTHO05D004115 2.2e-29 133.3 126 57.1
QL02p001047 Quercus lobata HOM05D000181 ORTHO05D004115 2.2e-29 133.3 120 62.5
Hma1.2p1_0544F.1_g175750 Hydrangea macrophylla HOM05D000181 ORTHO05D004115 2.9e-29 132.9 120 60.8
SEGI_20342 Sequoiadendron giganteum HOM05D000181 ORTHO05D004115 6.4e-29 131.7 91 71.4
CSS0002059 Camellia sinensis var. sinensis HOM05D000181 ORTHO05D004115 1.1e-28 131.0 122 63.9
GSVIVG01035393001 Vitis vinifera HOM05D000181 ORTHO05D004115 1.4e-28 130.6 108 65.7
Nn8g38828 Nelumbo nucifera HOM05D000181 ORTHO05D004115 1.9e-28 130.2 121 60.3
Aqoxy7G01194 Aquilegia oxysepala HOM05D000181 ORTHO05D004115 4.1e-28 129.0 105 67.6
Cfa017965 Carpinus fangiana HOM05D000181 ORTHO05D004115 4.1e-28 129.0 115 63.5
Haze_18171 Corylus avellana HOM05D000181 ORTHO05D004115 7.0e-28 128.3 115 62.6
arahy.Tifrunner.gnm1.ann1.V8EHWM Arachis hypogaea HOM05D000181 ORTHO05D004115 9.2e-28 127.9 120 60.0
CSS0033670 Camellia sinensis var. sinensis HOM05D000181 ORTHO05D004115 2.1e-27 126.7 96 69.8
Actinidia18180 Actinidia chinensis HOM05D000181 ORTHO05D004115 2.7e-27 126.3 87 73.6
CSS0016987 Camellia sinensis var. sinensis HOM05D000181 ORTHO05D004115 2.7e-27 126.3 87 73.6
Lalb_Chr23g0267791 Lupinus albus HOM05D000181 ORTHO05D004115 3.5e-27 125.9 117 59.0
Actinidia30320 Actinidia chinensis HOM05D000181 ORTHO05D004115 4.6e-27 125.6 87 75.9
CiPaw.16G028100 Carya illinoinensis HOM05D000181 ORTHO05D004115 6.0e-27 125.2 117 58.1
Eucgr.C00660 Eucalyptus grandis HOM05D000181 ORTHO05D004115 7.8e-27 124.8 120 58.3
Lj8A537T23 Lonicera japonica HOM05D000181 ORTHO05D004115 1.0e-26 124.4 86 74.4
arahy.Tifrunner.gnm1.ann1.47L445 Arachis hypogaea HOM05D000181 ORTHO05D004115 2.3e-26 123.2 94 70.2
PSO210G5134 Papaver somniferum HOM05D000181 ORTHO05D004115 2.3e-26 123.2 120 55.8
Lalb_Chr24g0399691 Lupinus albus HOM05D000181 ORTHO05D004115 3.0e-26 122.9 117 58.1
TWI34G1632 Tripterygium wilfordii HOM05D000181 ORTHO05D004115 3.0e-26 122.9 89 71.9
DCAR_003130 Daucus carota HOM05D000181 ORTHO05D004115 3.9e-26 122.5 115 55.7
vmacro14256 Vaccinium macrocarpon HOM05D000181 ORTHO05D004115 3.9e-26 122.5 118 58.5
Phvul.001G036400 Phaseolus vulgaris HOM05D000181 ORTHO05D004115 5.1e-26 122.1 117 55.6
Sabra06G0176200 Salix brachista HOM05D000181 ORTHO05D004115 5.1e-26 122.1 116 56.0
Potri.006G227700 Populus trichocarpa HOM05D000181 ORTHO05D004115 6.6e-26 121.7 116 55.2
HanXRQChr07g0190461 Helianthus annuus HOM05D000181 ORTHO05D004115 8.6e-26 121.3 117 56.4
PSO210G3118 Papaver somniferum HOM05D000181 ORTHO05D004115 8.6e-26 121.3 120 55.0
MD08G1063300 Malus domestica HOM05D000181 ORTHO05D004115 1.5e-25 120.6 128 53.9
Thecc.09G055200 Theobroma cacao HOM05D000181 ORTHO05D004115 1.5e-25 120.6 117 59.8
Cpa.g.sc7.184 Carica papaya HOM05D000181 ORTHO05D004115 1.9e-25 120.2 128 55.5
Duzib168G0634 Durio zibethinus HOM05D000181 ORTHO05D004115 1.9e-25 120.2 120 57.5
MD15G1058100 Malus domestica HOM05D000181 ORTHO05D004115 1.9e-25 120.2 118 56.8
Os01g0574500 Oryza sativa ssp. japonica HOM05D000181 ORTHO05D004115 1.9e-25 120.2 84 67.9
Zm00001eb160160 Zea mays HOM05D000181 ORTHO05D004115 1.9e-25 120.2 154 44.8
Actinidia01221 Actinidia chinensis HOM05D000179 ORTHO05D055366 2.5e-25 119.8 87 72.4
arahy.Tifrunner.gnm1.ann1.UJ20FY Arachis hypogaea HOM05D000181 ORTHO05D004115 2.5e-25 119.8 111 62.2
Ciclev10007603m.g Citrus clementina HOM05D000181 ORTHO05D004115 2.5e-25 119.8 117 57.3
Gohir.A13G187200 Gossypium hirsutum HOM05D000181 ORTHO05D004115 2.5e-25 119.8 117 58.1
arahy.Tifrunner.gnm1.ann1.0K8AZ2 Arachis hypogaea HOM05D000181 ORTHO05D004115 3.3e-25 119.4 117 57.3
Prupe.1G410800 Prunus persica HOM05D000181 ORTHO05D004115 3.3e-25 119.4 87 71.3
VMungo0647G1346 Vigna mungo HOM05D000181 ORTHO05D004115 3.3e-25 119.4 117 56.4
Rhsim07G0141900 Rhododendron simsii HOM05D000181 ORTHO05D004115 4.3e-25 119.0 86 70.9
Nitab4.5_0005436g0050 Nicotiana tabacum HOM05D000181 ORTHO05D004115 7.3e-25 118.2 117 54.7
CANSAT25G3685 Cannabis sativa HOM05D000181 ORTHO05D004115 9.5e-25 117.9 117 56.4
Glyma.17G228100 Glycine max HOM05D000181 ORTHO05D004115 9.5e-25 117.9 113 55.8
COL.COLO4_21069 Corchorus olitorius HOM05D000181 ORTHO05D004115 1.2e-24 117.5 97 63.9
Glyma.14G096000 Glycine max HOM05D000181 ORTHO05D004115 1.6e-24 117.1 87 70.1
Sed0014575 Sechium edule HOM05D000181 ORTHO05D004115 1.6e-24 117.1 99 61.6
Aa31LG5G9640 Aethionema arabicum HOM05D000181 ORTHO05D004115 2.1e-24 116.7 81 72.8
HanXRQChr13g0410561 Helianthus annuus HOM05D000181 ORTHO05D004115 2.1e-24 116.7 128 53.1
Lj1g0003102 Lotus japonicus HOM05D000181 ORTHO05D004115 2.8e-24 116.3 115 57.4
Atru.chr7.1092 Acer truncatum HOM05D000181 ORTHO05D004115 3.6e-24 115.9 117 54.7
Duzib150G1411 Durio zibethinus HOM05D000181 ORTHO05D004115 3.6e-24 115.9 105 62.9
MD15G1058500 Malus domestica HOM05D000181 ORTHO05D004115 3.6e-24 115.9 87 66.7
Gorai.013G220100 Gossypium raimondii HOM05D000181 ORTHO05D004115 4.7e-24 115.5 117 57.3
Manes.03G049000 Manihot esculenta HOM05D000181 ORTHO05D004115 4.7e-24 115.5 87 70.1
Nitab4.5_0002829g0060 Nicotiana tabacum HOM05D000181 ORTHO05D004115 4.7e-24 115.5 120 52.5
TWI63G0691 Tripterygium wilfordii HOM05D000181 ORTHO05D004115 4.7e-24 115.5 117 58.1
MELO3C016875.2 Cucumis melo HOM05D000181 ORTHO05D004115 8.1e-24 114.8 91 63.7
Gohir.D13G194000 Gossypium hirsutum HOM05D000181 ORTHO05D004115 1.1e-23 114.4 158 46.8
THA.LOC104818572 Tarenaya hassleriana HOM05D000181 ORTHO05D004115 1.4e-23 114.0 159 48.4
CAN.G9.21 Capsicum annuum HOM05D000181 ORTHO05D004115 1.8e-23 113.6 120 52.5
ClCG05G017900 Citrullus lanatus HOM05D000181 ORTHO05D004115 1.8e-23 113.6 92 64.1
PGR031G3719 Punica granatum HOM05D000181 ORTHO05D004115 1.8e-23 113.6 124 55.6
Psat0ss1279g0480 Pisum sativum HOM05D000181 ORTHO05D004115 2.3e-23 113.2 117 54.7
A04p20240 Brassica napus HOM05D000181 ORTHO05D004115 3.1e-23 112.8 120 54.2
CsaV3_4G035670 Cucumis sativus L. HOM05D000181 ORTHO05D004115 4.0e-23 112.5 91 62.6
DCAR_004410 Daucus carota HOM05D000181 ORTHO05D004115 4.0e-23 112.5 104 58.7
BcaC02g08307 Brassica carinata HOM05D000181 ORTHO05D004115 6.8e-23 111.7 120 53.3
C04p55950 Brassica napus HOM05D000181 ORTHO05D004115 6.8e-23 111.7 120 53.3
BolC4t27128H Brassica oleracea HOM05D000181 ORTHO05D004115 6.8e-23 111.7 120 53.3
CARHR114870 Cardamine hirsuta HOM05D000181 ORTHO05D004115 6.8e-23 111.7 79 72.2
Migut.E01569 Erythranthe guttata HOM05D000181 ORTHO05D004115 6.8e-23 111.7 120 56.7
HanXRQChr03g0079601 Helianthus annuus HOM05D000181 ORTHO05D004115 6.8e-23 111.7 83 73.5
Peaxi162Scf00637g00213 Petunia axillaris HOM05D000181 ORTHO05D004115 6.8e-23 111.7 119 49.6
Solyc08g063050.3 Solanum lycopersicum HOM05D000181 ORTHO05D004115 6.8e-23 111.7 120 51.7
BraA04t17603Z Brassica rapa HOM05D000181 ORTHO05D004115 8.9e-23 111.3 120 53.3
AL4G18380 Arabidopsis lyrata HOM05D000181 ORTHO05D004115 1.2e-22 110.9 79 72.2
Thhalv10001918m.g Eutrema salsugineum HOM05D000181 ORTHO05D004115 1.2e-22 110.9 81 70.4
Sp4g06130 Schrenkiella parvula HOM05D000181 ORTHO05D004115 1.2e-22 110.9 79 70.9
Sopen08g018620 Solanum pennellii HOM05D000181 ORTHO05D004115 1.2e-22 110.9 120 51.7
EL10Ac2g03856 Beta vulgaris HOM05D000181 ORTHO05D004115 1.5e-22 110.5 110 53.6
BcaB06g29602 Brassica carinata HOM05D000181 ORTHO05D004115 1.5e-22 110.5 133 48.9
Lsat_1_v5_gn_5_47461 Lactuca sativa HOM05D000181 ORTHO05D004115 1.5e-22 110.5 117 53.8
RcHm_v2.0_Chr6g0311091 Rosa chinensis HOM05D000181 ORTHO05D004115 1.5e-22 110.5 121 56.2
Oeu003989.1 Olea europaea HOM05D000181 ORTHO05D004115 2.6e-22 109.8 79 69.6
Ca_15861_v3 Cicer arietinum L. HOM05D000181 ORTHO05D004115 3.4e-22 109.4 117 52.1
FAN15G2475 Fragaria x ananassa HOM05D000181 ORTHO05D004115 3.4e-22 109.4 121 53.7
AT2G26140 Arabidopsis thaliana HOM05D000181 ORTHO05D004115 4.4e-22 109.0 79 70.9
Medtr3g104470 Medicago truncatula HOM05D000181 ORTHO05D004115 4.4e-22 109.0 118 54.2
Carub.0004s0599 Capsella rubella HOM05D000181 ORTHO05D004115 5.8e-22 108.6 120 53.3
FvH4_2g31730 Fragaria vesca HOM05D000181 ORTHO05D004115 5.8e-22 108.6 121 53.7
FAN24G2478 Fragaria x ananassa HOM05D000181 ORTHO05D004115 5.8e-22 108.6 121 53.7
Gohir.D07G021500 Gossypium hirsutum HOM05D000181 ORTHO05D004115 5.8e-22 108.6 120 55.8
Manes.16G081300 Manihot esculenta HOM05D000181 ORTHO05D004115 5.8e-22 108.6 85 67.1
Gorai.001G022200 Gossypium raimondii HOM05D000181 ORTHO05D004115 7.5e-22 108.2 120 55.8
Peaxi162Scf00327g00614 Petunia axillaris HOM05D000181 ORTHO05D004115 7.5e-22 108.2 79 68.4
Hund03332 Selenicereus undatus HOM05D000181 ORTHO05D004115 7.5e-22 108.2 108 53.7
BcaB08g35333 Brassica carinata HOM05D000181 ORTHO05D004115 9.9e-22 107.8 81 66.7
Sc09g0009870 Simmondsia chinensis HOM05D000181 ORTHO05D004115 9.9e-22 107.8 117 55.6
CAN.G309.48 Capsicum annuum HOM05D000181 ORTHO05D004115 1.3e-21 107.5 119 48.7
SGA_v2.0_scaffold163G38025 Striga asiatica HOM05D000181 ORTHO05D004115 1.3e-21 107.5 75 73.3
unitig_46.g17912 Utricularia gibba HOM05D000181 ORTHO05D004115 1.3e-21 107.5 111 54.1
MSTRG.14059 Avicennia marina HOM05D000181 ORTHO05D004115 1.7e-21 107.1 77 72.7
FAN27G0883 Fragaria x ananassa HOM05D000181 ORTHO05D004115 1.7e-21 107.1 121 52.1
AUR62009133 Chenopodium quinoa HOM05D000181 ORTHO05D004115 3.7e-21 105.9 117 53.8
DCAR_007730 Daucus carota HOM05D000181 ORTHO05D004115 3.7e-21 105.9 79 69.6
ECA233G2186 Erigeron canadensis HOM05D000181 ORTHO05D004115 4.9e-21 105.5 87 62.1
AUR62039121 Chenopodium quinoa HOM05D000181 ORTHO05D004115 6.4e-21 105.1 117 53.0
BcaC07g40834 Brassica carinata HOM05D000181 ORTHO05D004115 8.3e-21 104.8 81 65.4
C08p38290 Brassica napus HOM05D000181 ORTHO05D004115 8.3e-21 104.8 81 65.4
BraA09t40939Z Brassica rapa HOM05D000181 ORTHO05D004115 8.3e-21 104.8 81 65.4
Lsat_1_v5_gn_6_13540 Lactuca sativa HOM05D000181 ORTHO05D004115 1.1e-20 104.4 122 50.0
Os01g0574400 Oryza sativa ssp. japonica HOM05D000181 ORTHO05D004115 1.1e-20 104.4 84 58.3
MSTRG.11656 Avicennia marina HOM05D000181 ORTHO05D004115 1.4e-20 104.0 89 62.9
A09p55370 Brassica napus HOM05D000181 ORTHO05D004115 1.9e-20 103.6 81 64.2
Solyc11g069950.2 Solanum lycopersicum HOM05D000181 ORTHO05D004115 1.9e-20 103.6 119 46.2
Sopen11g028630 Solanum pennellii HOM05D000181 ORTHO05D004115 1.9e-20 103.6 119 46.2
VMungo0647G0127 Vigna mungo HOM05D000181 ORTHO05D004115 2.4e-20 103.2 117 50.4
ECA240G3295 Erigeron canadensis HOM05D000181 ORTHO05D004115 4.1e-20 102.4 88 63.6
Gohir.A07G021700 Gossypium hirsutum HOM05D000181 ORTHO05D004115 1.6e-19 100.5 117 53.8
Nitab4.5_0000227g0010 Nicotiana tabacum HOM05D000181 ORTHO05D004115 3.5e-19 99.4 119 46.2
Medtr3g104480 Medicago truncatula HOM05D000181 ORTHO05D004115 6.0e-19 98.6 117 51.3
unitig_26.g9799 Utricularia gibba HOM05D000181 ORTHO05D004115 1.0e-18 97.8 79 67.1
Zm00001eb345350 Zea mays HOM05D000181 ORTHO05D004115 1.3e-18 97.4 84 53.6
Psat0s934g0080 Pisum sativum HOM05D000181 ORTHO05D004115 3.0e-18 96.3 87 57.5
Hund19446 Selenicereus undatus HOM05D000181 ORTHO05D004115 1.1e-17 94.4 117 47.0
TPR.G3550 Trifolium pratense HOM05D000181 ORTHO05D004115 3.3e-17 92.8 117 47.9
Migut.E01568 Erythranthe guttata HOM05D000181 ORTHO05D004115 4.3e-17 92.4 126 50.0
THA.LOC104803725 Tarenaya hassleriana HOM05D000181 ORTHO05D004115 1.2e-16 90.9 95 53.7
Mapoly0031s0044 Marchantia polymorpha HOM05D000181 ORTHO05D004115 1.6e-16 90.5 114 46.5
SHI18729 Sapria himalayana HOM05D000181 ORTHO05D004115 4.7e-16 89.0 81 59.3
Medtr8g469440 Medicago truncatula HOM05D000181 ORTHO05D004115 6.2e-16 88.6 87 59.8
SalBow4G2318 Salvia bowleyana HOM05D000181 ORTHO05D004115 6.2e-16 88.6 123 44.7
Pp3c5_23480 Physcomitrium patens HOM05D000181 ORTHO05D004115 1.1e-15 87.8 113 46.0
Cc08_g10720 Coffea canephora HOM05D000181 ORTHO05D004115 1.8e-15 87.0 71 66.2
Pp3c6_6210 Physcomitrium patens HOM05D000181 ORTHO05D004115 3.4e-14 82.8 113 43.4
Medtr3g104475 Medicago truncatula HOM05D000181 ORTHO05D004115 3.8e-13 79.3 115 43.5
PSO210G2213 Papaver somniferum HOM05D000181 ORTHO05D004115 3.8e-13 79.3 83 53.0
TPR.G6586 Trifolium pratense HOM05D000181 ORTHO05D015097 3.8e-13 79.3 89 50.6
SMO137G0042 Selaginella moellendorffii HOM05D000181 ORTHO05D004115 4.9e-13 79.0 98 48.0
AagrBONN_evm.TU.Sc2ySwM_117.849 Anthoceros agrestis HOM05D000181 ORTHO05D004115 1.1e-12 77.8 85 50.6
Ca_11788_v3 Cicer arietinum L. HOM05D000181 ORTHO05D004115 4.2e-12 75.9 80 52.5
Medtr5g075340 Medicago truncatula HOM05D000181 ORTHO05D004115 1.2e-11 74.3 75 52.0
PSO210G2929 Papaver somniferum HOM05D000181 ORTHO05D004115 1.2e-11 74.3 88 51.1
Medtr5g075360 Medicago truncatula HOM05D000181 ORTHO05D004115 1.6e-11 73.9 115 43.5
SMO137G0299 Selaginella moellendorffii HOM05D000181 ORTHO05D004115 2.7e-11 73.2 82 52.4
PSO210G4522 Papaver somniferum HOM05D000181 ORTHO05D004115 1.7e-10 70.5 88 48.9
SMO137G0359 Selaginella moellendorffii HOM05D000181 ORTHO05D004115 1.5e-09 67.4 77 50.6
TPR.G3087 Trifolium pratense HOM05D000181 ORTHO05D015097 1.9e-09 67.0 99 45.5
SMO170G0075 Selaginella moellendorffii HOM05D000103 ORTHO05D000049 4.3e-09 65.9 71 52.1
TPR.G22985 Trifolium pratense HOM05D000181 ORTHO05D015097 5.6e-09 65.5 86 45.3
SMO170G0031 Selaginella moellendorffii HOM05D000181 ORTHO05D004115 9.6e-09 64.7 56 60.7
SGA_v2.0_scaffold169G38698 Striga asiatica HOM05D000181 ORTHO05D038347 1.2e-08 64.3 39 79.5
PSO210G3520 Papaver somniferum HOM05D000181 ORTHO05D004115 2.1e-08 63.5 114 37.7
PSO210G7301 Papaver somniferum HOM05D000181 ORTHO05D304246 2.1e-08 63.5 114 37.7
Actinidia14721 Actinidia chinensis HOM05D000181 ORTHO05D004115 2.8e-08 63.2 45 73.3
Psat0s934g0040 Pisum sativum HOM05D000181 ORTHO05D004115 2.8e-08 63.2 96 42.7
SMO137G0136 Selaginella moellendorffii HOM05D000103 ORTHO05D000049 1.4e-07 60.8 85 47.1
SMO137G0237 Selaginella moellendorffii HOM05D000103 ORTHO05D000049 1.4e-07 60.8 85 47.1
Medtr3g104490 Medicago truncatula HOM05D000181 ORTHO05D004115 4.0e-07 59.3 43 65.1
Medtr8g469460 Medicago truncatula HOM05D000181 ORTHO05D004115 4.0e-07 59.3 43 67.4
PSO210G1347 Papaver somniferum HOM05D000181 ORTHO05D004115 5.3e-07 58.9 98 41.8
SMO137G0255 Selaginella moellendorffii HOM05D000103 ORTHO05D000049 9.9e-06 54.7 107 38.3


User provided reference genes

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