Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0022G064 Amborella trichopoda HOM05D001083 ORTHO05D031080 1.3e-182 642.9 314 100.0
MBI02_g09037_MAGBIO Magnolia biondii HOM05D001083 ORTHO05D001637 9.0e-27 125.2 182 46.2
Nn5g29925 Nelumbo nucifera HOM05D001083 ORTHO05D001637 2.0e-26 124.0 208 40.9
RcHm_v2.0_Chr7g0237261 Rosa chinensis HOM05D001083 ORTHO05D001637 1.4e-24 117.9 244 39.3
Thecc.08G068700 Theobroma cacao HOM05D001083 ORTHO05D001637 2.5e-24 117.1 249 39.0
FvH4_5g35670 Fragaria vesca HOM05D001083 ORTHO05D001637 7.2e-24 115.5 241 39.0
Cfa013696 Carpinus fangiana HOM05D001083 ORTHO05D001637 1.6e-23 114.4 250 39.2
FAN18G4577 Fragaria x ananassa HOM05D001083 ORTHO05D001637 1.6e-23 114.4 241 38.6
FAN08G2447 Fragaria x ananassa HOM05D001083 ORTHO05D001637 2.1e-23 114.0 245 39.2
FAN04G0690 Fragaria x ananassa HOM05D001083 ORTHO05D001637 2.7e-23 113.6 242 39.3
FAN13G0758 Fragaria x ananassa HOM05D001083 ORTHO05D001637 2.7e-23 113.6 245 38.4
TAR381G0262 Trochodendron aralioides HOM05D001083 ORTHO05D001637 4.6e-23 112.8 199 39.7
Gohir.A05G220800 Gossypium hirsutum HOM05D001083 ORTHO05D001637 6.1e-23 112.5 241 37.8
QL09p017299 Quercus lobata HOM05D001083 ORTHO05D001637 1.0e-22 111.7 199 41.2
Haze_22336 Corylus avellana HOM05D001083 ORTHO05D001637 3.0e-22 110.2 194 42.8
TAR381G1168 Trochodendron aralioides HOM05D001083 ORTHO05D001637 5.1e-22 109.4 199 39.2
DCAR_019306 Daucus carota HOM05D001083 ORTHO05D001637 8.8e-22 108.6 227 39.6
Duzib093G0227 Durio zibethinus HOM05D001083 ORTHO05D001637 8.8e-22 108.6 244 38.1
CiPaw.07G167400 Carya illinoinensis HOM05D001083 ORTHO05D001637 1.5e-21 107.8 239 38.9
Aqoxy5G01324 Aquilegia oxysepala HOM05D001083 ORTHO05D001637 2.0e-21 107.5 186 42.5
Dinv42628 Davidia involucrata HOM05D001083 ORTHO05D001637 3.3e-21 106.7 193 46.1
Glyma.02G212700 Glycine max HOM05D001083 ORTHO05D001637 3.3e-21 106.7 221 40.3
Gorai.009G230700 Gossypium raimondii HOM05D001083 ORTHO05D001637 9.7e-21 105.1 242 38.0
VMungo0647G2201 Vigna mungo HOM05D001083 ORTHO05D001637 1.7e-20 104.4 238 38.2
Cpa.g.sc309.2 Carica papaya HOM05D001083 ORTHO05D001637 2.8e-20 103.6 191 39.8
Lj4C734T9 Lonicera japonica HOM05D001083 ORTHO05D001637 2.8e-20 103.6 242 36.4
Dinv44843 Davidia involucrata HOM05D001083 ORTHO05D001637 3.7e-20 103.2 221 41.2
GSVIVG01009148001 Vitis vinifera HOM05D001083 ORTHO05D001637 3.7e-20 103.2 193 41.5
MD08G1194200 Malus domestica HOM05D001083 ORTHO05D001637 4.8e-20 102.8 200 40.0
MD15G1382300 Malus domestica HOM05D001083 ORTHO05D001637 4.8e-20 102.8 240 38.3
Nitab4.5_0000131g0450 Nicotiana tabacum HOM05D001083 ORTHO05D001637 4.8e-20 102.8 205 42.0
Nitab4.5_0003300g0020 Nicotiana tabacum HOM05D001083 ORTHO05D001637 4.8e-20 102.8 208 42.8
Prupe.1G528500 Prunus persica HOM05D001083 ORTHO05D001637 4.8e-20 102.8 235 37.9
Ca_05404_v3 Cicer arietinum L. HOM05D001083 ORTHO05D001637 6.3e-20 102.4 196 41.3
Cc10_g15680 Coffea canephora HOM05D001083 ORTHO05D001637 6.3e-20 102.4 199 41.2
Glyma.14G180600 Glycine max HOM05D001083 ORTHO05D001637 1.4e-19 101.3 221 39.8
Medtr5g065900 Medicago truncatula HOM05D001083 ORTHO05D001637 1.8e-19 100.9 191 42.4
Sopen04g030070 Solanum pennellii HOM05D001083 ORTHO05D001637 1.8e-19 100.9 208 42.3
Aqoxy6G01457 Aquilegia oxysepala HOM05D001083 ORTHO05D001637 2.4e-19 100.5 197 40.6
Phvul.008G180300 Phaseolus vulgaris HOM05D001083 ORTHO05D001637 5.3e-19 99.4 220 37.7
Actinidia30817 Actinidia chinensis HOM05D001083 ORTHO05D001637 6.9e-19 99.0 227 39.2
arahy.Tifrunner.gnm1.ann1.BPHJ2T Arachis hypogaea HOM05D001083 ORTHO05D001637 1.5e-18 97.8 212 39.2
arahy.Tifrunner.gnm1.ann1.WC25VJ Arachis hypogaea HOM05D001083 ORTHO05D001637 1.5e-18 97.8 212 39.2
TAR625G0327 Trochodendron aralioides HOM05D001083 ORTHO05D001637 1.5e-18 97.8 245 34.7
TWI56G0184 Tripterygium wilfordii HOM05D001083 ORTHO05D001637 2.0e-18 97.4 241 35.3
Actinidia10374 Actinidia chinensis HOM05D001083 ORTHO05D001637 2.6e-18 97.1 206 41.3
Eucgr.F00407 Eucalyptus grandis HOM05D001083 ORTHO05D001637 3.4e-18 96.7 198 38.4
Oeu022181.1 Olea europaea HOM05D001083 ORTHO05D001637 4.5e-18 96.3 206 39.8
Duzib041G0389 Durio zibethinus HOM05D001083 ORTHO05D001637 7.7e-18 95.5 226 38.1
CANSAT25G2442 Cannabis sativa HOM05D001083 ORTHO05D001637 3.8e-17 93.2 241 36.9
Peaxi162Scf00281g00321 Petunia axillaris HOM05D001083 ORTHO05D001637 3.8e-17 93.2 177 43.5
HanXRQChr10g0278081 Helianthus annuus HOM05D001083 ORTHO05D001637 8.5e-17 92.0 199 40.7
CiPaw.08G054500 Carya illinoinensis HOM05D001083 ORTHO05D001637 1.4e-16 91.3 222 35.6
ClCG11G014490 Citrullus lanatus HOM05D001083 ORTHO05D001637 1.4e-16 91.3 195 39.0
EL10Ac1g01078 Beta vulgaris HOM05D001083 ORTHO05D001637 4.2e-16 89.7 224 36.6
vmacro21322 Vaccinium macrocarpon HOM05D001083 ORTHO05D001637 5.5e-16 89.4 205 40.0
Psat2g066480 Pisum sativum HOM05D001083 ORTHO05D001637 1.2e-15 88.2 197 40.6
Rhsim06G0073500 Rhododendron simsii HOM05D001083 ORTHO05D001637 1.6e-15 87.8 218 39.0
Manes.02G146300 Manihot esculenta HOM05D001083 ORTHO05D001637 2.1e-15 87.4 239 35.1
Solyc04g076100.4 Solanum lycopersicum HOM05D001083 ORTHO05D001637 2.1e-15 87.4 167 44.9
LjContig00408g0016994 Lotus japonicus HOM05D001083 ORTHO05D001637 2.7e-15 87.0 196 36.7
CsaV3_3G047900 Cucumis sativus L. HOM05D001083 ORTHO05D001637 3.6e-15 86.7 195 37.4
TPR.G16018 Trifolium pratense HOM05D001083 ORTHO05D001637 3.6e-15 86.7 155 42.6
MBI06_g36046_MAGBIO Magnolia biondii HOM05D001083 ORTHO05D001637 4.7e-15 86.3 184 39.7
Sed0007107 Sechium edule HOM05D001083 ORTHO05D001637 4.7e-15 86.3 192 38.5
MELO3C003532.2 Cucumis melo HOM05D001083 ORTHO05D001637 7.9e-15 85.5 195 37.4
ECA246G4856 Erigeron canadensis HOM05D001083 ORTHO05D001637 7.9e-15 85.5 222 36.9
CSS0007953 Camellia sinensis var. sinensis HOM05D001083 ORTHO05D001637 2.3e-14 84.0 226 34.5
AUR62019024 Chenopodium quinoa HOM05D001083 ORTHO05D001637 3.0e-14 83.6 229 35.8
CSS0042788 Camellia sinensis var. sinensis HOM05D001083 ORTHO05D001637 8.8e-14 82.0 206 35.4
HanXRQChr15g0484801 Helianthus annuus HOM05D001083 ORTHO05D001637 1.1e-13 81.6 190 37.4
PGR042G0314 Punica granatum HOM05D001083 ORTHO05D001637 1.5e-13 81.3 199 38.2
Hund27010 Selenicereus undatus HOM05D001083 ORTHO05D001637 1.5e-13 81.3 211 37.0
Ah.05g170700 Amaranthus hybridus HOM05D001083 ORTHO05D001637 2.0e-13 80.9 205 36.1
Lalb_Chr04g0252951 Lupinus albus HOM05D001083 ORTHO05D001637 2.0e-13 80.9 195 36.9
Lalb_Chr17g0344441 Lupinus albus HOM05D001083 ORTHO05D001637 2.0e-13 80.9 194 36.1
Gohir.A02G077800 Gossypium hirsutum HOM05D001083 ORTHO05D001637 7.4e-13 79.0 221 35.3
AUR62027861 Chenopodium quinoa HOM05D001083 ORTHO05D001637 2.2e-12 77.4 221 33.0
Sc01g0001080 Simmondsia chinensis HOM05D001083 ORTHO05D001637 2.2e-12 77.4 147 42.9
Lsat_1_v5_gn_6_104860 Lactuca sativa HOM05D001083 ORTHO05D001637 3.7e-12 76.6 238 34.5
Potri.002G104100 Populus trichocarpa HOM05D001083 ORTHO05D001637 4.8e-12 76.3 239 35.1
Lsat_1_v5_gn_9_74021 Lactuca sativa HOM05D001083 ORTHO05D001637 6.3e-12 75.9 218 33.5
Ciclev10000059m.g Citrus clementina HOM05D001083 ORTHO05D001637 1.8e-11 74.3 215 35.3
Sed0013781 Sechium edule HOM05D001083 ORTHO05D001637 1.8e-11 74.3 214 34.1
ECA232G2539 Erigeron canadensis HOM05D001083 ORTHO05D001637 7.7e-10 68.9 163 35.6
PGR031G0695 Punica granatum HOM05D001083 ORTHO05D001637 7.7e-10 68.9 207 37.2
Sabra02G0081600 Salix brachista HOM05D001083 ORTHO05D001637 1.0e-09 68.6 191 35.6
Atru.chr13.1039 Acer truncatum HOM05D001083 ORTHO05D001637 1.7e-09 67.8 147 39.5
PSO170G2511 Papaver somniferum HOM05D001083 ORTHO05D001637 1.7e-09 67.8 240 32.1
Gohir.D02G085000 Gossypium hirsutum HOM05D001083 ORTHO05D001637 2.9e-09 67.0 221 32.1
SEGI_27560 Sequoiadendron giganteum HOM05D001083 ORTHO05D001637 6.5e-09 65.9 230 32.2
PSO017G3393 Papaver somniferum HOM05D001083 ORTHO05D001637 1.5e-08 64.7 240 32.5
THA.LOC104806846 Tarenaya hassleriana HOM05D001083 ORTHO05D001637 5.5e-08 62.8 166 36.1
HPP92_013342 Vanilla planifolia HOM05D001083 ORTHO05D001637 7.2e-08 62.4 186 34.9
HPP92_013349 Vanilla planifolia HOM05D001083 ORTHO05D001637 2.1e-07 60.8 186 34.4
Zm00001eb255590 Zea mays HOM05D001083 ORTHO05D001637 2.1e-07 60.8 218 28.4
MD10G1111400 Malus domestica HOM05D001083 ORTHO05D031080 5.2e-06 56.2 109 35.8


User provided reference genes

Program Settings