Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0019G040 Amborella trichopoda HOM05D006057 ORTHO05D007224 3.8e-82 308.1 160 100.0
MBI18_g03875_MAGBIO Magnolia biondii HOM05D006057 ORTHO05D007224 4.2e-28 128.6 103 64.1
GSVIVG01028268001 Vitis vinifera HOM05D006057 ORTHO05D007224 3.7e-24 115.5 100 60.0
arahy.Tifrunner.gnm1.ann1.78VVNS Arachis hypogaea HOM05D006057 ORTHO05D007224 1.8e-23 113.2 102 57.8
arahy.Tifrunner.gnm1.ann1.TF3SPP Arachis hypogaea HOM05D006057 ORTHO05D007224 1.8e-23 113.2 102 57.8
PSO339G1810 Papaver somniferum HOM05D006057 ORTHO05D007224 6.9e-23 111.3 105 56.2
CDE01G0754 Ceratophyllum demersum HOM05D006057 ORTHO05D007224 9.0e-23 110.9 104 56.7
PSO170G4276 Papaver somniferum HOM05D006057 ORTHO05D007224 1.2e-22 110.5 108 55.6
Lalb_Chr02g0147311 Lupinus albus HOM05D006057 ORTHO05D007224 4.5e-22 108.6 102 55.9
Potri.014G110300 Populus trichocarpa HOM05D006057 ORTHO05D007224 4.5e-22 108.6 99 58.6
Glyma.10G140400 Glycine max HOM05D006057 ORTHO05D007224 9.9e-22 107.5 102 53.9
TAR633G2394 Trochodendron aralioides HOM05D006057 ORTHO05D007224 1.3e-21 107.1 99 57.6
PSO081G0045 Papaver somniferum HOM05D006057 ORTHO05D007224 2.2e-21 106.3 105 54.3
HanXRQChr07g0194641 Helianthus annuus HOM05D006057 ORTHO05D007224 3.8e-21 105.5 97 56.7
VMungo0720G1137 Vigna mungo HOM05D006057 ORTHO05D007224 3.8e-21 105.5 103 54.4
Ciclev10023548m.g Citrus clementina HOM05D006057 ORTHO05D007224 8.4e-21 104.4 103 53.4
Lj5g0024678 Lotus japonicus HOM05D006057 ORTHO05D007224 1.1e-20 104.0 103 53.4
Medtr1g085355 Medicago truncatula HOM05D006057 ORTHO05D007224 1.1e-20 104.0 104 51.9
Duzib138G1502 Durio zibethinus HOM05D006057 ORTHO05D007224 1.4e-20 103.6 94 55.3
Phvul.007G207500 Phaseolus vulgaris HOM05D006057 ORTHO05D007224 2.5e-20 102.8 102 54.9
Sabra02G0131200 Salix brachista HOM05D006057 ORTHO05D007224 2.5e-20 102.8 127 46.5
Atru.chr5.830 Acer truncatum HOM05D006057 ORTHO05D007224 3.2e-20 102.4 105 54.3
ClCG10G013240 Citrullus lanatus HOM05D006057 ORTHO05D007224 4.2e-20 102.1 97 53.6
Eucgr.A00985 Eucalyptus grandis HOM05D006057 ORTHO05D007224 4.2e-20 102.1 104 52.9
Nn4g25242 Nelumbo nucifera HOM05D006057 ORTHO05D007224 4.2e-20 102.1 106 52.8
ECA238G2998 Erigeron canadensis HOM05D006057 ORTHO05D007224 5.5e-20 101.7 106 50.9
Medtr4g118050 Medicago truncatula HOM05D006057 ORTHO05D007224 5.5e-20 101.7 104 51.0
TPR.G3097 Trifolium pratense HOM05D006057 ORTHO05D007224 5.5e-20 101.7 104 51.9
Ca_10224_v3 Cicer arietinum L. HOM05D006057 ORTHO05D007224 7.1e-20 101.3 104 50.0
Medtr1g085440 Medicago truncatula HOM05D006057 ORTHO05D007224 7.1e-20 101.3 104 50.0
CsaV3_3G043390 Cucumis sativus L. HOM05D006057 ORTHO05D007224 9.3e-20 100.9 107 49.5
Psat6g157560 Pisum sativum HOM05D006057 ORTHO05D007224 9.3e-20 100.9 104 50.0
QL09p037524 Quercus lobata HOM05D006057 ORTHO05D007224 9.3e-20 100.9 110 54.5
Thhalv10015298m.g Eutrema salsugineum HOM05D006057 ORTHO05D007224 1.2e-19 100.5 103 50.5
Manes.05G006500 Manihot esculenta HOM05D006057 ORTHO05D007224 1.2e-19 100.5 105 53.3
Aa31LG1G21980 Aethionema arabicum HOM05D006057 ORTHO05D007224 1.6e-19 100.1 97 54.6
Prupe.3G028700 Prunus persica HOM05D006057 ORTHO05D007224 1.6e-19 100.1 113 50.4
Gorai.008G133300 Gossypium raimondii HOM05D006057 ORTHO05D007224 2.1e-19 99.8 102 52.0
TWI14G0531 Tripterygium wilfordii HOM05D006057 ORTHO05D007224 2.1e-19 99.8 109 52.3
AL6G12340 Arabidopsis lyrata HOM05D006057 ORTHO05D007224 2.7e-19 99.4 97 52.6
Haze_05170 Corylus avellana HOM05D006057 ORTHO05D007224 2.7e-19 99.4 113 53.1
Gohir.D12G122500 Gossypium hirsutum HOM05D006057 ORTHO05D007224 2.7e-19 99.4 101 52.5
Lj1C4G2 Lonicera japonica HOM05D006057 ORTHO05D007224 3.5e-19 99.0 94 56.4
Aqoxy5G02874 Aquilegia oxysepala HOM05D006057 ORTHO05D007224 4.6e-19 98.6 106 51.9
Cpa.g.sc57.50 Carica papaya HOM05D006057 ORTHO05D007224 4.6e-19 98.6 109 54.1
Sp6g39640 Schrenkiella parvula HOM05D006057 ORTHO05D007224 4.6e-19 98.6 97 52.6
CSS0031729 Camellia sinensis var. sinensis HOM05D006057 ORTHO05D007224 6.0e-19 98.2 100 52.0
COL.COLO4_23092 Corchorus olitorius HOM05D006057 ORTHO05D007224 6.0e-19 98.2 86 55.8
PGR042G0310 Punica granatum HOM05D006057 ORTHO05D007224 6.0e-19 98.2 111 50.5
Sed0018142 Sechium edule HOM05D006057 ORTHO05D007224 6.0e-19 98.2 109 49.5
Sopen03g037330 Solanum pennellii HOM05D006057 ORTHO05D007224 6.0e-19 98.2 105 50.5
CARHR210270 Cardamine hirsuta HOM05D006057 ORTHO05D007224 7.9e-19 97.8 97 52.6
Lju2566A1T37 Lonicera japonica HOM05D006057 ORTHO05D007224 7.9e-19 97.8 96 54.2
Peaxi162Scf00314g00430 Petunia axillaris HOM05D006057 ORTHO05D007224 7.9e-19 97.8 105 49.5
Carub.0006s0184 Capsella rubella HOM05D006057 ORTHO05D007224 1.0e-18 97.4 97 50.5
MELO3C026900.2 Cucumis melo HOM05D006057 ORTHO05D007224 1.0e-18 97.4 107 48.6
Solyc03g118440.3 Solanum lycopersicum HOM05D006057 ORTHO05D007224 1.0e-18 97.4 105 50.5
BcaB05g21854 Brassica carinata HOM05D006057 ORTHO05D007224 1.3e-18 97.1 97 51.5
BraA02t04741Z Brassica rapa HOM05D006057 ORTHO05D007224 1.3e-18 97.1 97 51.5
RcHm_v2.0_Chr2g0148291 Rosa chinensis HOM05D006057 ORTHO05D007224 1.8e-18 96.7 107 48.6
BcaC03g13034 Brassica carinata HOM05D006057 ORTHO05D007224 2.3e-18 96.3 97 51.5
BcaC03g13036 Brassica carinata HOM05D006057 ORTHO05D007224 2.3e-18 96.3 97 51.5
C02p00760 Brassica napus HOM05D006057 ORTHO05D007224 2.3e-18 96.3 97 51.5
BolC2t06074H Brassica oleracea HOM05D006057 ORTHO05D007224 2.3e-18 96.3 97 51.5
Migut.L00999 Erythranthe guttata HOM05D006057 ORTHO05D007224 2.3e-18 96.3 106 48.1
Migut.L01023 Erythranthe guttata HOM05D006057 ORTHO05D007224 2.3e-18 96.3 106 47.2
AT5G03050 Arabidopsis thaliana HOM05D006057 ORTHO05D007224 3.9e-18 95.5 97 50.5
Nitab4.5_0002046g0150 Nicotiana tabacum HOM05D006057 ORTHO05D007224 3.9e-18 95.5 102 50.0
PGSC0003DMG400014183 Solanum tuberosum HOM05D006057 ORTHO05D007224 3.9e-18 95.5 105 48.6
BcaNung05509 Brassica carinata HOM05D006057 ORTHO05D007224 5.1e-18 95.1 88 54.5
CANSAT25G1403 Cannabis sativa HOM05D006057 ORTHO05D007224 5.1e-18 95.1 85 56.5
MD17G1156700 Malus domestica HOM05D006057 ORTHO05D007224 5.1e-18 95.1 99 51.5
Nitab4.5_0002450g0080 Nicotiana tabacum HOM05D006057 ORTHO05D007224 5.1e-18 95.1 103 49.5
EL10Ac4g10232 Beta vulgaris HOM05D006057 ORTHO05D007224 6.7e-18 94.7 89 52.8
BcaC06g32028 Brassica carinata HOM05D006057 ORTHO05D007224 6.7e-18 94.7 103 50.5
Hma1.2p1_0350F.1_g132530 Hydrangea macrophylla HOM05D006057 ORTHO05D007224 6.7e-18 94.7 97 54.6
Rhsim01G0001300 Rhododendron simsii HOM05D006057 ORTHO05D007224 6.7e-18 94.7 100 50.0
Sc09g0000780 Simmondsia chinensis HOM05D006057 ORTHO05D007224 6.7e-18 94.7 97 50.5
Ah.04g162100 Amaranthus hybridus HOM05D006057 ORTHO05D007224 8.7e-18 94.4 94 51.1
Ah.06g194050 Amaranthus hybridus HOM05D006057 ORTHO05D007224 8.7e-18 94.4 96 50.0
Gohir.A07G132650 Gossypium hirsutum HOM05D006057 ORTHO05D007224 8.7e-18 94.4 100 51.0
TWI59G0504 Tripterygium wilfordii HOM05D006057 ORTHO05D007224 8.7e-18 94.4 109 51.4
AUR62000136 Chenopodium quinoa HOM05D006057 ORTHO05D007224 1.1e-17 94.0 97 49.5
DCAR_012291 Daucus carota HOM05D006057 ORTHO05D007224 1.1e-17 94.0 106 49.1
Gohir.A12G118700 Gossypium hirsutum HOM05D006057 ORTHO05D007224 1.1e-17 94.0 101 49.5
Lsat_1_v5_gn_2_108401 Lactuca sativa HOM05D006057 ORTHO05D007224 1.1e-17 94.0 108 50.0
BraA10t45317Z Brassica rapa HOM05D006057 ORTHO05D007224 1.5e-17 93.6 88 52.3
C09p73700 Brassica napus HOM05D006057 ORTHO05D007224 2.5e-17 92.8 88 52.3
BolC9t60100H Brassica oleracea HOM05D006057 ORTHO05D007224 2.5e-17 92.8 88 52.3
BcaC06g32027 Brassica carinata HOM05D006057 ORTHO05D007224 3.3e-17 92.4 88 52.3
BcaNung04734 Brassica carinata HOM05D006057 ORTHO05D007224 3.3e-17 92.4 88 52.3
BolC9t60103H Brassica oleracea HOM05D006057 ORTHO05D007224 3.3e-17 92.4 88 52.3
Nitab4.5_0001841g0090 Nicotiana tabacum HOM05D006057 ORTHO05D007224 3.3e-17 92.4 107 50.5
CDE12G0816 Ceratophyllum demersum HOM05D006057 ORTHO05D007224 5.6e-17 91.7 69 68.1
AUR62019316 Chenopodium quinoa HOM05D006057 ORTHO05D007224 5.6e-17 91.7 89 50.6
DCAR_012292 Daucus carota HOM05D006057 ORTHO05D007224 7.4e-17 91.3 106 47.2
FvH4_6g36280 Fragaria vesca HOM05D006057 ORTHO05D007224 7.4e-17 91.3 91 49.5
vmacro02351 Vaccinium macrocarpon HOM05D006057 ORTHO05D007224 7.4e-17 91.3 106 46.2
Migut.L00831 Erythranthe guttata HOM05D006057 ORTHO05D007224 1.6e-16 90.1 94 48.9
SHI19776 Sapria himalayana HOM05D006057 ORTHO05D007224 1.6e-16 90.1 100 48.0
Nitab4.5_0010904g0040 Nicotiana tabacum HOM05D006057 ORTHO05D007224 2.1e-16 89.7 85 56.5
Hund22023 Selenicereus undatus HOM05D006057 ORTHO05D007224 2.8e-16 89.4 89 50.6
CAN.G843.33 Capsicum annuum HOM05D006057 ORTHO05D007224 3.7e-16 89.0 98 49.0
HPP92_026861 Vanilla planifolia HOM05D006057 ORTHO05D007224 6.2e-16 88.2 80 53.8
SEGI_31615 Sequoiadendron giganteum HOM05D006057 ORTHO05D007224 1.1e-15 87.4 104 50.0
SGA_v2.0_scaffold38G15005 Striga asiatica HOM05D006057 ORTHO05D007224 1.4e-15 87.0 106 46.2
Actinidia21332 Actinidia chinensis HOM05D006057 ORTHO05D007224 2.4e-15 86.3 81 53.1
Os03g0108700 Oryza sativa ssp. japonica HOM05D006057 ORTHO05D007224 6.9e-15 84.7 87 51.7
SMO361G0765 Selaginella moellendorffii HOM05D006057 ORTHO05D007224 2.0e-14 83.2 85 50.6
unitig_26.g10007 Utricularia gibba HOM05D006057 ORTHO05D007224 2.0e-14 83.2 100 45.0
Zm00001eb000680 Zea mays HOM05D006057 ORTHO05D007224 2.6e-14 82.8 109 45.0
Cc08_g05070 Coffea canephora HOM05D006057 ORTHO05D007224 4.5e-14 82.0 94 45.7
SGA_v2.0_scaffold36G14563 Striga asiatica HOM05D006057 ORTHO05D007224 7.6e-14 81.3 105 46.7
Glyma.20G089200 Glycine max HOM05D006057 ORTHO05D007224 2.2e-13 79.7 117 41.9
Oeu048368.1 Olea europaea HOM05D006057 ORTHO05D007224 2.2e-13 79.7 104 43.3
Potri.002G184600 Populus trichocarpa HOM05D006057 ORTHO05D007224 4.9e-13 78.6 82 50.0
Pp3c25_8550 Physcomitrium patens HOM05D006057 ORTHO05D007224 1.0e-10 70.9 92 41.3
Gorai.001G149000 Gossypium raimondii HOM05D006057 ORTHO05D007224 1.8e-10 70.1 64 54.7
CBR_g39249 Chara braunii HOM05D006057 ORTHO05D007224 2.3e-10 69.7 113 37.2
CiPaw.07G127700 Carya illinoinensis HOM05D006057 ORTHO05D007224 5.1e-10 68.6 115 42.6
Gohir.D07G136950 Gossypium hirsutum HOM05D006057 ORTHO05D007224 8.7e-10 67.8 64 56.2
BcaNung05508 Brassica carinata HOM05D006057 ORTHO05D007224 4.8e-08 62.0 90 38.9
TPR.G3076 Trifolium pratense HOM05D006057 ORTHO05D007224 1.8e-07 60.1 66 47.0
Mapoly0076s0084 Marchantia polymorpha HOM05D006057 ORTHO05D007224 4.5e-06 55.5 83 34.9


User provided reference genes

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