Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0019G017 Amborella trichopoda HOM05D004306 ORTHO05D005055 2.9e-240 834.7 391 100.0
TAR628G0028 Trochodendron aralioides HOM05D004306 ORTHO05D005055 5.9e-201 704.1 377 85.4
Dinv26913 Davidia involucrata HOM05D004306 ORTHO05D005055 1.3e-200 703.0 376 84.6
Cfa004112 Carpinus fangiana HOM05D004306 ORTHO05D005055 8.5e-200 700.3 377 84.4
GSVIVG01000140001 Vitis vinifera HOM05D004306 ORTHO05D005055 3.2e-199 698.4 377 83.6
CSS0001342 Camellia sinensis var. sinensis HOM05D004306 ORTHO05D005055 5.5e-199 697.6 377 84.4
Atru.chr3.158 Acer truncatum HOM05D004306 ORTHO05D005055 4.7e-198 694.5 377 83.8
Atru.chr3.187 Acer truncatum HOM05D004306 ORTHO05D005055 4.7e-198 694.5 377 83.8
Actinidia11991 Actinidia chinensis HOM05D004306 ORTHO05D005055 6.1e-198 694.1 377 83.8
Duzib264G0002 Durio zibethinus HOM05D004306 ORTHO05D005055 6.1e-198 694.1 377 83.3
GSVIVG01000135001 Vitis vinifera HOM05D004306 ORTHO05D005055 7.9e-198 693.7 377 82.8
Thecc.01G070200 Theobroma cacao HOM05D004306 ORTHO05D005055 1.0e-197 693.3 377 83.6
Nn1g04599 Nelumbo nucifera HOM05D004306 ORTHO05D005055 1.4e-197 693.0 377 83.8
PGR102G2907 Punica granatum HOM05D004306 ORTHO05D005055 1.8e-197 692.6 377 82.2
Lj4A160T62 Lonicera japonica HOM05D004306 ORTHO05D005055 2.3e-197 692.2 377 83.3
Rhsim10G0101200 Rhododendron simsii HOM05D004306 ORTHO05D005055 3.0e-197 691.8 377 83.8
Phvul.003G236000 Phaseolus vulgaris HOM05D004306 ORTHO05D005055 5.1e-197 691.0 377 83.3
AUR62003989 Chenopodium quinoa HOM05D004306 ORTHO05D005055 1.5e-196 689.5 377 82.5
Gohir.D11G207000 Gossypium hirsutum HOM05D004306 ORTHO05D005055 1.5e-196 689.5 377 83.0
Gohir.A11G216400 Gossypium hirsutum HOM05D004306 ORTHO05D005055 4.4e-196 688.0 377 83.0
Lsat_1_v5_gn_2_82860 Lactuca sativa HOM05D004306 ORTHO05D005055 4.4e-196 688.0 377 83.0
Manes.12G110500 Manihot esculenta HOM05D004306 ORTHO05D005055 5.7e-196 687.6 377 83.0
VMungo0251G0785 Vigna mungo HOM05D004306 ORTHO05D005055 5.7e-196 687.6 377 83.6
Oeu014230.2 Olea europaea HOM05D004306 ORTHO05D005055 7.4e-196 687.2 377 82.2
FAN23G0931 Fragaria x ananassa HOM05D004306 ORTHO05D005055 9.7e-196 686.8 376 83.2
ECA238G2426 Erigeron canadensis HOM05D004306 ORTHO05D005055 1.3e-195 686.4 377 83.6
Glyma.17G161900 Glycine max HOM05D004306 ORTHO05D005055 1.3e-195 686.4 377 83.6
Gorai.007G222100 Gossypium raimondii HOM05D004306 ORTHO05D005055 1.3e-195 686.4 377 82.5
Prupe.6G223000 Prunus persica HOM05D004306 ORTHO05D005055 1.3e-195 686.4 376 83.2
Medtr4g095660 Medicago truncatula HOM05D004306 ORTHO05D005055 1.7e-195 686.0 377 83.3
Os01g0764900 Oryza sativa ssp. japonica HOM05D004306 ORTHO05D005055 1.7e-195 686.0 377 82.5
GSVIVG01000137001 Vitis vinifera HOM05D004306 ORTHO05D005055 1.7e-195 686.0 377 82.5
Ciclev10025794m.g Citrus clementina HOM05D004306 ORTHO05D005055 2.2e-195 685.6 377 83.8
FAN28G1176 Fragaria x ananassa HOM05D004306 ORTHO05D005055 2.2e-195 685.6 376 82.7
TWI09G0703 Tripterygium wilfordii HOM05D004306 ORTHO05D005055 2.2e-195 685.6 376 83.2
TPR.G23896 Trifolium pratense HOM05D004306 ORTHO05D005055 3.7e-195 684.9 377 83.3
FAN26G3311 Fragaria x ananassa HOM05D004306 ORTHO05D005055 4.8e-195 684.5 376 82.7
MD15G1294800 Malus domestica HOM05D004306 ORTHO05D005055 4.8e-195 684.5 376 83.2
Oeu040626.2 Olea europaea HOM05D004306 ORTHO05D005055 6.3e-195 684.1 377 82.5
Aqoxy6G02701 Aquilegia oxysepala HOM05D004306 ORTHO05D005055 2.4e-194 682.2 377 83.0
CiPaw.02G003700 Carya illinoinensis HOM05D004306 ORTHO05D005055 2.4e-194 682.2 377 83.0
Ca_13922_v3 Cicer arietinum L. HOM05D004306 ORTHO05D005055 2.4e-194 682.2 377 82.0
ClCG01G017440 Citrullus lanatus HOM05D004306 ORTHO05D005055 2.4e-194 682.2 376 82.2
Lalb_Chr16g0389191 Lupinus albus HOM05D004306 ORTHO05D005055 2.4e-194 682.2 377 82.5
AL7G13210 Arabidopsis lyrata HOM05D004306 ORTHO05D005055 3.1e-194 681.8 377 82.0
CDE04G2054 Ceratophyllum demersum HOM05D004306 ORTHO05D005055 3.1e-194 681.8 377 83.8
HanXRQChr14g0449471 Helianthus annuus HOM05D004306 ORTHO05D005055 4.1e-194 681.4 377 84.1
Peaxi162Scf00264g00117 Petunia axillaris HOM05D004306 ORTHO05D005055 4.1e-194 681.4 377 81.2
Hund13938 Selenicereus undatus HOM05D004306 ORTHO05D005055 4.1e-194 681.4 373 82.6
Duzib187G0102 Durio zibethinus HOM05D004306 ORTHO05D005055 9.1e-194 680.2 377 81.7
PSO541G4466 Papaver somniferum HOM05D004306 ORTHO05D005055 9.1e-194 680.2 377 81.4
Zm00001eb370290 Zea mays HOM05D004306 ORTHO05D005055 9.1e-194 680.2 377 81.7
CANSAT01G0675 Cannabis sativa HOM05D004306 ORTHO05D005055 1.2e-193 679.9 376 82.4
Sed0025668 Sechium edule HOM05D004306 ORTHO05D005055 1.2e-193 679.9 376 81.6
MELO3C007621.2 Cucumis melo HOM05D004306 ORTHO05D005055 1.5e-193 679.5 376 81.6
BolC1t00152H Brassica oleracea HOM05D004306 ORTHO05D005055 2.0e-193 679.1 377 81.4
Nitab4.5_0000651g0100 Nicotiana tabacum HOM05D004306 ORTHO05D005055 2.0e-193 679.1 377 80.4
FvH4_1g17390 Fragaria vesca HOM05D004306 ORTHO05D005055 2.6e-193 678.7 375 82.7
Potri.005G145400 Populus trichocarpa HOM05D004306 ORTHO05D005055 2.6e-193 678.7 377 82.0
C01p01570 Brassica napus HOM05D004306 ORTHO05D005055 4.5e-193 677.9 377 81.4
FAN19G2263 Fragaria x ananassa HOM05D004306 ORTHO05D005055 4.5e-193 677.9 386 81.1
AT4G37550 Arabidopsis thaliana HOM05D004306 ORTHO05D005055 5.9e-193 677.6 377 81.7
A01p01390 Brassica napus HOM05D004306 ORTHO05D005055 5.9e-193 677.6 377 81.4
BraA01t00135Z Brassica rapa HOM05D004306 ORTHO05D005055 5.9e-193 677.6 377 81.4
CsaV3_6G043980 Cucumis sativus L. HOM05D004306 ORTHO05D005055 5.9e-193 677.6 373 82.0
PGSC0003DMG400024965 Solanum tuberosum HOM05D004306 ORTHO05D005055 5.9e-193 677.6 377 81.2
CARHR245960 Cardamine hirsuta HOM05D004306 ORTHO05D005055 7.7e-193 677.2 377 82.0
Thhalv10025178m.g Eutrema salsugineum HOM05D004306 ORTHO05D005055 7.7e-193 677.2 377 81.2
Thhalv10025180m.g Eutrema salsugineum HOM05D004306 ORTHO05D005055 7.7e-193 677.2 377 81.7
EL10Ac6g15639 Beta vulgaris HOM05D004306 ORTHO05D005055 2.2e-192 675.6 377 81.7
Solyc02g092530.4 Solanum lycopersicum HOM05D004306 ORTHO05D005055 2.9e-192 675.2 377 81.2
Carub.0007s0271 Capsella rubella HOM05D004306 ORTHO05D005055 3.8e-192 674.9 377 81.4
AL7G13200 Arabidopsis lyrata HOM05D004306 ORTHO05D005055 5.0e-192 674.5 377 81.2
AUR62040257 Chenopodium quinoa HOM05D004306 ORTHO05D005055 6.5e-192 674.1 374 82.1
Migut.L00204 Erythranthe guttata HOM05D004306 ORTHO05D005055 6.5e-192 674.1 371 83.3
Lj4g0006645 Lotus japonicus HOM05D004306 ORTHO05D005055 8.5e-192 673.7 377 81.7
Cpa.g.sc6.39 Carica papaya HOM05D004306 ORTHO05D005055 1.1e-191 673.3 374 81.6
AT4G37560 Arabidopsis thaliana HOM05D004306 ORTHO05D005055 1.5e-191 672.9 377 81.2
MBI16_g09132_MAGBIO Magnolia biondii HOM05D004306 ORTHO05D005055 2.5e-191 672.2 373 81.8
Sp7g35230 Schrenkiella parvula HOM05D004306 ORTHO05D005055 2.5e-191 672.2 377 80.1
CARHR245950 Cardamine hirsuta HOM05D004306 ORTHO05D005055 3.2e-191 671.8 377 81.4
Cc07_g06920 Coffea canephora HOM05D004306 ORTHO05D005055 3.2e-191 671.8 377 81.4
BraA01t00136Z Brassica rapa HOM05D004306 ORTHO05D005055 9.4e-191 670.2 376 80.1
Sabra05G0116200 Salix brachista HOM05D004306 ORTHO05D005055 9.4e-191 670.2 369 81.6
A01p01400 Brassica napus HOM05D004306 ORTHO05D005055 1.2e-190 669.8 376 79.8
BolC1t00153H Brassica oleracea HOM05D004306 ORTHO05D005055 1.2e-190 669.8 376 79.5
HPP92_014148 Vanilla planifolia HOM05D004306 ORTHO05D005055 1.2e-190 669.8 377 82.2
BcaNung05904 Brassica carinata HOM05D004306 ORTHO05D005055 1.6e-190 669.5 376 79.5
C01p01580 Brassica napus HOM05D004306 ORTHO05D005055 1.6e-190 669.5 376 79.5
Haze_15301 Corylus avellana HOM05D004306 ORTHO05D005055 2.1e-190 669.1 452 70.6
SGA_v2.0_scaffold21G09395 Striga asiatica HOM05D004306 ORTHO05D005055 2.7e-190 668.7 377 80.4
Lj4g0023143 Lotus japonicus HOM05D004306 ORTHO05D005055 6.1e-190 667.5 371 82.2
MSTRG.15357 Avicennia marina HOM05D004306 ORTHO05D005055 8.0e-190 667.2 377 81.2
Eucgr.H02295 Eucalyptus grandis HOM05D004306 ORTHO05D005055 8.0e-190 667.2 377 80.1
SalBow5G1134 Salvia bowleyana HOM05D004306 ORTHO05D005055 8.0e-190 667.2 377 80.4
SalBow5G1710 Salvia bowleyana HOM05D004306 ORTHO05D005055 8.0e-190 667.2 377 80.4
Aa31LG6G14430 Aethionema arabicum HOM05D004306 ORTHO05D005055 1.4e-189 666.4 377 80.6
arahy.Tifrunner.gnm1.ann1.GV60EB Arachis hypogaea HOM05D004306 ORTHO05D005055 8.8e-189 663.7 376 80.9
Sp7g35240 Schrenkiella parvula HOM05D004306 ORTHO05D005055 8.8e-189 663.7 377 79.6
Sopen02g037110 Solanum pennellii HOM05D004306 ORTHO05D005055 8.8e-189 663.7 369 81.3
CAN.G1075.22 Capsicum annuum HOM05D004306 ORTHO05D005055 2.2e-187 659.1 377 79.3
THA.LOC104819873 Tarenaya hassleriana HOM05D004306 ORTHO05D005055 1.2e-185 653.3 407 75.2
Nitab4.5_0006069g0040 Nicotiana tabacum HOM05D004306 ORTHO05D005055 5.9e-185 651.0 362 80.1
Cfa004110 Carpinus fangiana HOM05D004306 ORTHO05D005055 2.2e-184 649.0 387 78.6
BcaNung05906 Brassica carinata HOM05D004306 ORTHO05D005055 2.3e-181 639.0 377 78.0
Ah.02g125510 Amaranthus hybridus HOM05D004306 ORTHO05D005055 6.8e-181 637.5 380 77.4
vmacro05397 Vaccinium macrocarpon HOM05D004306 ORTHO05D005055 6.8e-181 637.5 377 78.5
RcHm_v2.0_Chr2g0107581 Rosa chinensis HOM05D004306 ORTHO05D005055 1.2e-180 636.7 373 78.8
unitig_748.g8394 Utricularia gibba HOM05D004306 ORTHO05D005055 3.4e-180 635.2 377 78.5
BcaNung05905 Brassica carinata HOM05D004306 ORTHO05D005055 1.1e-178 630.2 376 76.3
SMO141G0231 Selaginella moellendorffii HOM05D004306 ORTHO05D005055 4.5e-177 624.8 377 75.9
Cre16.g691750 Chlamydomonas reinhardtii HOM05D004306 ORTHO05D005055 4.7e-174 614.8 377 75.9
DCAR_025786 Daucus carota HOM05D004306 ORTHO05D005055 1.8e-173 612.8 377 75.1
Hma1.2p1_0730F.1_g209845 Hydrangea macrophylla HOM05D004306 ORTHO05D005055 3.0e-173 612.1 372 76.9
Pp3c3_32950 Physcomitrium patens HOM05D004306 ORTHO05D005055 1.3e-168 596.7 378 73.3
CSS0047878 Camellia sinensis var. sinensis HOM05D004306 ORTHO05D005055 1.2e-166 590.1 372 75.0
HPP92_014166 Vanilla planifolia HOM05D004306 ORTHO05D005055 9.2e-162 573.9 347 77.5
Psat0ss839g0200 Pisum sativum HOM05D004306 ORTHO05D005055 1.7e-160 569.7 304 86.2
CSS0039286 Camellia sinensis var. sinensis HOM05D004306 ORTHO05D005055 1.7e-155 553.1 371 70.1
Zm00001eb152190 Zea mays HOM05D004306 ORTHO05D005055 1.0e-152 543.9 316 76.3
DCAR_025787 Daucus carota HOM05D004306 ORTHO05D005055 4.7e-142 508.4 288 78.5
CSS0041574 Camellia sinensis var. sinensis HOM05D004306 ORTHO05D005055 7.8e-137 491.1 381 65.1
Sc16g0000120 Simmondsia chinensis HOM05D004306 ORTHO05D005055 4.7e-134 481.9 259 85.7
SEGI_32720 Sequoiadendron giganteum HOM05D004306 ORTHO05D005055 3.0e-128 462.6 295 71.9
SMO170G0023 Selaginella moellendorffii HOM05D004306 ORTHO05D005055 1.8e-125 453.4 381 58.5
ATR0019G021 Amborella trichopoda HOM05D004306 ORTHO05D005055 5.1e-120 435.3 280 75.4
Sc16g0000140 Simmondsia chinensis HOM05D004306 ORTHO05D005055 2.9e-115 419.5 225 86.2
arahy.Tifrunner.gnm1.ann1.HR4B5C Arachis hypogaea HOM05D004306 ORTHO05D005055 7.9e-113 411.4 223 84.8
COL.COLO4_11552 Corchorus olitorius HOM05D004306 ORTHO05D005055 2.1e-110 403.3 377 55.2
Oeu013288.2 Olea europaea HOM05D004306 ORTHO05D005055 4.3e-95 352.4 387 51.7
MD00G1015700 Malus domestica HOM05D004306 ORTHO05D005055 6.1e-89 332.0 199 73.4
Cfa025028 Carpinus fangiana HOM05D004306 ORTHO05D005055 9.1e-69 265.0 270 49.3
Sc16g0000130 Simmondsia chinensis HOM05D004306 ORTHO05D005055 1.2e-68 264.6 153 73.9
SEGI_13173 Sequoiadendron giganteum HOM05D004306 ORTHO05D005055 1.1e-66 258.1 156 73.1
EL10Ac1g01850 Beta vulgaris HOM05D004306 ORTHO05D005055 4.2e-66 256.1 150 74.7
arahy.Tifrunner.gnm1.ann1.ZW9ABU Arachis hypogaea HOM05D004306 ORTHO05D005055 1.2e-65 254.6 153 73.2
EL10Ac5g12500 Beta vulgaris HOM05D004306 ORTHO05D005055 3.0e-64 250.0 140 80.0
COL.COLO4_11551 Corchorus olitorius HOM05D004306 ORTHO05D005055 4.5e-52 209.5 135 74.8
RcHm_v2.0_Chr2g0107621 Rosa chinensis HOM05D004306 ORTHO05D005055 5.7e-47 192.6 137 66.4
CDE07G1667 Ceratophyllum demersum HOM05D004306 ORTHO05D005055 1.2e-41 174.9 117 68.4
EL10Ac4g09102 Beta vulgaris HOM05D004306 ORTHO05D005055 6.8e-40 169.1 132 59.1
DCAR_000330 Daucus carota HOM05D004306 ORTHO05D005055 3.4e-39 166.8 86 87.2
MD00G1015600 Malus domestica HOM05D004306 ORTHO05D005055 8.1e-33 145.6 84 84.5
SEGI_23023 Sequoiadendron giganteum HOM05D004306 ORTHO05D005055 6.8e-32 142.5 75 85.3
SEGI_27901 Sequoiadendron giganteum HOM05D004306 ORTHO05D005055 5.8e-31 139.4 74 86.5
ATR0515G001 Amborella trichopoda HOM05D004306 ORTHO05D005055 2.1e-25 120.9 55 100.0
vmacro05396 Vaccinium macrocarpon HOM05D004306 ORTHO05D005055 5.2e-24 116.3 74 71.6
Cfa004111 Carpinus fangiana HOM05D004306 ORTHO05D005055 8.9e-24 115.5 78 67.9
AUR62003988 Chenopodium quinoa HOM05D004306 ORTHO05D005055 1.4e-21 108.2 70 70.0
FAN28G1106 Fragaria x ananassa HOM05D004306 ORTHO05D005055 3.2e-21 107.1 73 67.1
SGA_v2.0_scaffold21G09394 Striga asiatica HOM05D004306 ORTHO05D005055 1.3e-19 101.7 66 68.2
Lj4C160G10 Lonicera japonica HOM05D004306 ORTHO05D005055 5.1e-19 99.8 73 64.4
Psat5g012000 Pisum sativum HOM05D004306 ORTHO05D005055 7.3e-18 95.9 83 53.0
Dinv30076 Davidia involucrata HOM05D004306 ORTHO05D005055 9.6e-18 95.5 80 55.0
SEGI_03818 Sequoiadendron giganteum HOM05D004306 ORTHO05D005055 1.2e-15 88.6 67 59.7
Cc07_g06910 Coffea canephora HOM05D004306 ORTHO05D005055 2.0e-15 87.8 58 65.5
Nitab4.5_0000032g0200 Nicotiana tabacum HOM05D004306 ORTHO05D005055 1.0e-11 75.5 46 67.4
Eucgr.H02294 Eucalyptus grandis HOM05D004306 ORTHO05D005055 1.3e-11 75.1 67 52.2
EL10Ac4g09101 Beta vulgaris HOM05D004306 ORTHO05D005055 3.9e-11 73.6 44 68.2
TPR.G23871 Trifolium pratense HOM05D004306 ORTHO05D005055 2.5e-10 70.9 37 91.9
Thecc.01G069900 Theobroma cacao HOM05D004306 ORTHO05D005055 8.1e-09 65.9 36 77.8


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