Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0019G005 Amborella trichopoda HOM05D007038 ORTHO05D008893 4.2e-209 731.1 369 100.0
TAR626G0465 Trochodendron aralioides HOM05D007038 ORTHO05D008893 9.1e-95 351.3 374 52.7
QL02p093776 Quercus lobata HOM05D007038 ORTHO05D008893 1.1e-92 344.4 364 51.1
Nn8g39966 Nelumbo nucifera HOM05D007038 ORTHO05D008893 1.9e-92 343.6 380 52.6
GSVIVG01023636001 Vitis vinifera HOM05D007038 ORTHO05D008893 1.8e-90 337.0 371 48.8
Atru.chr7.996 Acer truncatum HOM05D007038 ORTHO05D008893 4.4e-89 332.4 366 50.3
Cfa020806 Carpinus fangiana HOM05D007038 ORTHO05D008893 1.2e-86 324.3 361 50.1
MD15G1150700 Malus domestica HOM05D007038 ORTHO05D008893 5.9e-86 322.0 367 48.2
Manes.06G033300 Manihot esculenta HOM05D007038 ORTHO05D008893 5.9e-86 322.0 371 49.3
Dinv42838 Davidia involucrata HOM05D007038 ORTHO05D008893 1.0e-85 321.2 383 44.9
FvH4_1g00730 Fragaria vesca HOM05D007038 ORTHO05D008893 3.3e-84 316.2 370 45.9
CiPaw.16G107900 Carya illinoinensis HOM05D007038 ORTHO05D008893 1.2e-83 314.3 366 48.4
Glyma.02G205400 Glycine max HOM05D007038 ORTHO05D008893 1.2e-83 314.3 368 48.6
Glyma.17G072600 Glycine max HOM05D007038 ORTHO05D008893 1.6e-83 313.9 375 49.3
arahy.Tifrunner.gnm1.ann1.2821YK Arachis hypogaea HOM05D007038 ORTHO05D008893 2.1e-83 313.5 378 47.1
TPR.G24832 Trifolium pratense HOM05D007038 ORTHO05D008893 4.7e-83 312.4 374 47.1
VMungo1215G2991 Vigna mungo HOM05D007038 ORTHO05D008893 8.0e-83 311.6 372 48.1
Gorai.013G241400 Gossypium raimondii HOM05D007038 ORTHO05D008893 1.0e-82 311.2 362 48.6
Dinv43261 Davidia involucrata HOM05D007038 ORTHO05D008893 1.8e-82 310.5 381 43.8
Gohir.A13G206700 Gossypium hirsutum HOM05D007038 ORTHO05D008893 2.3e-82 310.1 362 48.3
arahy.Tifrunner.gnm1.ann1.ULM9BE Arachis hypogaea HOM05D007038 ORTHO05D008893 5.2e-82 308.9 376 47.1
FAN28G0561 Fragaria x ananassa HOM05D007038 ORTHO05D008893 6.8e-82 308.5 391 44.0
Aqoxy7G03364 Aquilegia oxysepala HOM05D007038 ORTHO05D008893 1.2e-81 307.8 366 45.6
RcHm_v2.0_Chr2g0085451 Rosa chinensis HOM05D007038 ORTHO05D008893 1.5e-81 307.4 376 44.4
Lj4g0021787 Lotus japonicus HOM05D007038 ORTHO05D008893 4.4e-81 305.8 371 47.7
TWI63G0746 Tripterygium wilfordii HOM05D007038 ORTHO05D008893 1.3e-80 304.3 351 46.7
Medtr4g130580 Medicago truncatula HOM05D007038 ORTHO05D008893 2.2e-80 303.5 370 46.5
Lj9A719G52 Lonicera japonica HOM05D007038 ORTHO05D008893 6.3e-80 302.0 374 46.5
CSS0013222 Camellia sinensis var. sinensis HOM05D007038 ORTHO05D008893 5.4e-79 298.9 384 45.3
FAN23G2273 Fragaria x ananassa HOM05D007038 ORTHO05D008893 1.2e-78 297.7 395 43.5
CSS0015539 Camellia sinensis var. sinensis HOM05D007038 ORTHO05D008893 7.8e-78 295.0 389 45.0
FAN23G1724 Fragaria x ananassa HOM05D007038 ORTHO05D008893 7.8e-78 295.0 399 43.1
Actinidia23561 Actinidia chinensis HOM05D007038 ORTHO05D008893 1.0e-77 294.7 388 44.1
ECA234G0501 Erigeron canadensis HOM05D007038 ORTHO05D008893 1.0e-77 294.7 370 46.2
Prupe.7G265000 Prunus persica HOM05D007038 ORTHO05D008893 6.6e-77 292.0 364 45.6
Sed0007561 Sechium edule HOM05D007038 ORTHO05D008893 1.9e-76 290.4 370 45.1
Sc14g0000940 Simmondsia chinensis HOM05D007038 ORTHO05D008893 1.9e-76 290.4 376 43.9
CANSAT11G2324 Cannabis sativa HOM05D007038 ORTHO05D008893 2.5e-76 290.0 358 46.9
EL10Ac8g18937 Beta vulgaris HOM05D007038 ORTHO05D008893 3.3e-76 289.7 358 44.4
Cpa.g.sc46.174 Carica papaya HOM05D007038 ORTHO05D008893 1.0e-74 284.6 363 45.7
Lalb_Chr13g0300771 Lupinus albus HOM05D007038 ORTHO05D008893 1.0e-74 284.6 371 46.1
Lsat_1_v5_gn_5_89520 Lactuca sativa HOM05D007038 ORTHO05D008893 3.1e-74 283.1 382 44.5
MBI14_g09472_MAGBIO Magnolia biondii HOM05D007038 ORTHO05D008893 6.8e-74 282.0 326 48.8
Psat0s3930g0120 Pisum sativum HOM05D007038 ORTHO05D008893 1.2e-73 281.2 357 46.2
Migut.J01371 Erythranthe guttata HOM05D007038 ORTHO05D008893 2.6e-73 280.0 340 44.7
PGR102G3121 Punica granatum HOM05D007038 ORTHO05D008893 1.3e-72 277.7 373 42.6
Eucgr.C02504 Eucalyptus grandis HOM05D007038 ORTHO05D008893 4.9e-72 275.8 366 44.5
Rhsim03G0258100 Rhododendron simsii HOM05D007038 ORTHO05D008893 1.4e-71 274.2 402 42.5
Sopen07g001900 Solanum pennellii HOM05D007038 ORTHO05D008893 1.4e-71 274.2 396 42.4
PGSC0003DMG400011195 Solanum tuberosum HOM05D007038 ORTHO05D008893 4.1e-71 272.7 367 42.8
PSO063G4531 Papaver somniferum HOM05D007038 ORTHO05D008893 1.2e-70 271.2 371 43.7
SalBow1G2783 Salvia bowleyana HOM05D007038 ORTHO05D008893 2.7e-70 270.0 396 40.4
Hund08926 Selenicereus undatus HOM05D007038 ORTHO05D008893 2.7e-70 270.0 394 42.1
Carub.0008s1841 Capsella rubella HOM05D007038 ORTHO05D008893 3.5e-70 269.6 354 43.2
C02p13780 Brassica napus HOM05D007038 ORTHO05D008893 4.6e-70 269.2 356 41.6
BolC2t07497H Brassica oleracea HOM05D007038 ORTHO05D008893 4.6e-70 269.2 356 41.6
CARHR271660 Cardamine hirsuta HOM05D007038 ORTHO05D008893 4.6e-70 269.2 372 41.9
Os08g0555800 Oryza sativa ssp. japonica HOM05D007038 ORTHO05D008893 1.3e-69 267.7 366 42.6
Sabra06G0139000 Salix brachista HOM05D007038 ORTHO05D008893 3.9e-69 266.2 464 36.6
AL8G33930 Arabidopsis lyrata HOM05D007038 ORTHO05D008893 6.6e-69 265.4 362 40.6
Thhalv10015603m.g Eutrema salsugineum HOM05D007038 ORTHO05D008893 1.9e-68 263.8 352 42.0
THA.LOC104811831 Tarenaya hassleriana HOM05D007038 ORTHO05D008893 3.3e-68 263.1 370 42.7
ClCG02G014390 Citrullus lanatus HOM05D007038 ORTHO05D008893 4.7e-67 259.2 399 41.4
Zm00001eb180360 Zea mays HOM05D007038 ORTHO05D008893 4.7e-67 259.2 371 41.8
AT5G57880 Arabidopsis thaliana HOM05D007038 ORTHO05D008893 3.4e-65 253.1 362 39.8
Phvul.003G155000 Phaseolus vulgaris HOM05D007038 ORTHO05D008893 5.8e-65 252.3 313 45.7
Haze_19163 Corylus avellana HOM05D007038 ORTHO05D008893 1.7e-64 250.8 404 40.6
BraA02t05887Z Brassica rapa HOM05D007038 ORTHO05D008893 2.2e-64 250.4 348 40.8
Cc06_g14750 Coffea canephora HOM05D007038 ORTHO05D008893 2.2e-64 250.4 323 44.9
A02p08130 Brassica napus HOM05D007038 ORTHO05D008893 4.9e-64 249.2 348 40.2
DCAR_019405 Daucus carota HOM05D007038 ORTHO05D008893 6.4e-64 248.8 325 42.8
BcaB05g22382 Brassica carinata HOM05D007038 ORTHO05D008893 1.4e-63 247.7 372 41.1
HanXRQChr16g0520471 Helianthus annuus HOM05D007038 ORTHO05D008893 7.1e-63 245.4 430 37.0
Aa31LG3G13710 Aethionema arabicum HOM05D007038 ORTHO05D008893 1.6e-62 244.2 358 38.8
Duzib150G1077 Durio zibethinus HOM05D007038 ORTHO05D008893 4.6e-62 242.7 358 41.1
Ciclev10009099m.g Citrus clementina HOM05D007038 ORTHO05D008893 3.0e-61 240.0 283 48.1
SGA_v2.0_scaffold265G46092 Striga asiatica HOM05D007038 ORTHO05D008893 1.1e-60 238.0 361 39.3
C09p49760 Brassica napus HOM05D007038 ORTHO05D008893 4.3e-60 236.1 389 36.8
A10p15240 Brassica napus HOM05D007038 ORTHO05D008893 5.6e-60 235.7 392 37.8
FAN26G1014 Fragaria x ananassa HOM05D007038 ORTHO05D008893 2.1e-59 233.8 371 39.4
BraA10t43606Z Brassica rapa HOM05D007038 ORTHO05D008893 3.1e-58 229.9 402 37.3
BcaC04g19921 Brassica carinata HOM05D007038 ORTHO05D008893 8.9e-58 228.4 402 36.8
HanXRQChr16g0520451 Helianthus annuus HOM05D007038 ORTHO05D008893 4.4e-57 226.1 353 38.8
Ca_21139_v3 Cicer arietinum L. HOM05D007038 ORTHO05D008893 1.9e-55 220.7 309 44.0
Ca_21144_v3 Cicer arietinum L. HOM05D007038 ORTHO05D008893 1.9e-55 220.7 309 44.0
BolC9t57827H Brassica oleracea HOM05D007038 ORTHO05D008893 1.7e-53 214.2 441 32.7
vmacro06062 Vaccinium macrocarpon HOM05D007038 ORTHO05D008893 8.6e-53 211.8 382 36.9
Nitab4.5_0002724g0040 Nicotiana tabacum HOM05D007038 ORTHO05D008893 4.3e-52 209.5 423 34.3
AUR62028347 Chenopodium quinoa HOM05D007038 ORTHO05D008893 1.1e-50 204.9 285 41.1
AUR62025344 Chenopodium quinoa HOM05D007038 ORTHO05D008893 5.2e-50 202.6 285 41.1
Thecc.09G151200 Theobroma cacao HOM05D007038 ORTHO05D008893 5.2e-50 202.6 274 42.7
Potri.006G182301 Populus trichocarpa HOM05D007038 ORTHO05D008893 6.0e-46 189.1 175 52.0
Solyc07g005790.4 Solanum lycopersicum HOM05D007038 ORTHO05D008893 8.1e-43 178.7 179 50.3
unitig_46.g18476 Utricularia gibba HOM05D007038 ORTHO05D008893 8.1e-43 178.7 351 33.3
Gohir.D13G211300 Gossypium hirsutum HOM05D007038 ORTHO05D008893 5.8e-41 172.6 275 38.9
Nitab4.5_0002320g0050 Nicotiana tabacum HOM05D001418 ORTHO05D002038 1.2e-38 164.9 423 31.2
CAN.G160.33 Capsicum annuum HOM05D007038 ORTHO05D008893 1.1e-36 158.3 164 48.2
Peaxi162Scf00401g00327 Petunia axillaris HOM05D007038 ORTHO05D008893 4.0e-34 149.8 143 50.3
CsaV3_2G007610 Cucumis sativus L. HOM05D007038 ORTHO05D008893 3.4e-25 120.2 275 34.2
CDE05G1617 Ceratophyllum demersum HOM05D007038 ORTHO05D008893 1.5e-20 104.8 147 42.2
Solyc07g005800.2 Solanum lycopersicum HOM05D007038 ORTHO05D008893 2.5e-20 104.0 161 41.0
Peaxi162Scf00401g00326 Petunia axillaris HOM05D007038 ORTHO05D008893 7.4e-20 102.4 179 38.0
Potri.006G182201 Populus trichocarpa HOM05D007038 ORTHO05D008893 3.1e-18 97.1 132 41.7
CDE02G0638 Ceratophyllum demersum HOM05D007038 ORTHO05D008893 6.9e-18 95.9 147 41.5
Hma1.2p1_0222F.1_g093710 Hydrangea macrophylla HOM05D007038 ORTHO05D008893 1.9e-15 87.8 90 48.9
Hma1.2p1_0222F.1_g093742 Hydrangea macrophylla HOM05D007038 ORTHO05D008893 1.9e-15 87.8 90 48.9
Mapoly0056s0109 Marchantia polymorpha HOM05D007038 ORTHO05D008893 6.7e-13 79.3 213 25.4
PSO782G2459 Papaver somniferum HOM05D007038 ORTHO05D008893 7.4e-12 75.9 118 43.2
SHI02845 Sapria himalayana HOM05D007038 ORTHO05D008893 2.4e-10 70.9 137 36.5
Ah.14g084570 Amaranthus hybridus HOM05D007038 ORTHO05D008893 1.0e-08 65.5 67 50.7
HPP92_020432 Vanilla planifolia HOM05D000367 ORTHO05D008893 2.2e-08 64.3 84 45.2


User provided reference genes

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