Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0006G065 Amborella trichopoda HOM05D037035 ORTHO05D066988 1.6e-25 118.6 61 100.0
ATR0006G048 Amborella trichopoda HOM05D037035 ORTHO05D069142 1.6e-20 102.1 58 87.9
ATR0006G042 Amborella trichopoda HOM05D037035 ORTHO05D068376 1.0e-19 99.4 59 83.1
ATR0006G081 Amborella trichopoda HOM05D000028 ORTHO05D000296 4.8e-17 90.5 58 74.1
ATR0712G154 Amborella trichopoda HOM05D000028 ORTHO05D003251 9.4e-13 76.3 57 57.9
ATR0712G046 Amborella trichopoda HOM05D000028 ORTHO05D000296 1.4e-11 72.4 54 59.3
ATR0006G023 Amborella trichopoda HOM05D000028 ORTHO05D000296 5.7e-10 67.0 38 81.6
ATR0712G081 Amborella trichopoda HOM05D000028 ORTHO05D000296 8.2e-09 63.2 54 57.4
ATR0584G101 Amborella trichopoda HOM05D000028 ORTHO05D000296 1.8e-08 62.0 54 53.7
ATR0681G075 Amborella trichopoda HOM05D000028 ORTHO05D001176 3.1e-08 61.2 54 51.9
ATR0712G024 Amborella trichopoda HOM05D000028 ORTHO05D000296 9.1e-08 59.7 54 55.6
Glyma.06G149500 Glycine max HOM05D000028 ORTHO05D001176 1.2e-07 59.3 56 50.0
VMungo1309G2257 Vigna mungo HOM05D000028 ORTHO05D001176 1.2e-07 59.3 56 48.2
ATR0712G140 Amborella trichopoda HOM05D000028 ORTHO05D000296 2.0e-07 58.5 54 51.9
Dinv15099 Davidia involucrata HOM05D000028 ORTHO05D001176 4.5e-07 57.4 53 52.8
PGR119G0333 Punica granatum HOM05D000028 ORTHO05D001176 4.5e-07 57.4 56 48.2
SEGI_32472 Sequoiadendron giganteum HOM05D000028 ORTHO05D000296 4.5e-07 57.4 57 47.4
Lalb_Chr08g0238671 Lupinus albus HOM05D000028 ORTHO05D001176 5.9e-07 57.0 56 44.6
Phvul.002G268800 Phaseolus vulgaris HOM05D000028 ORTHO05D001176 5.9e-07 57.0 56 48.2
Phvul.009G147200 Phaseolus vulgaris HOM05D000028 ORTHO05D001176 7.7e-07 56.6 53 47.2
VMungo0251G2152 Vigna mungo HOM05D000028 ORTHO05D001176 7.7e-07 56.6 56 48.2
Duzib147G0114 Durio zibethinus HOM05D000028 ORTHO05D001176 1.0e-06 56.2 53 50.9
Glyma.05G187900 Glycine max HOM05D000028 ORTHO05D001176 1.0e-06 56.2 57 47.4
Cc07_g17010 Coffea canephora HOM05D000028 ORTHO05D001176 1.3e-06 55.8 56 50.0
Sed0018047 Sechium edule HOM05D000028 ORTHO05D001176 1.7e-06 55.5 44 56.8
Dinv12125 Davidia involucrata HOM05D000028 ORTHO05D001176 2.2e-06 55.1 58 48.3
Sabra19G0021400 Salix brachista HOM05D000028 ORTHO05D001176 2.2e-06 55.1 58 48.3
arahy.Tifrunner.gnm1.ann1.B0W2CD Arachis hypogaea HOM05D000028 ORTHO05D001176 2.9e-06 54.7 41 56.1
CSS0023892 Camellia sinensis var. sinensis HOM05D000028 ORTHO05D001176 2.9e-06 54.7 60 46.7
CiPaw.03G129300 Carya illinoinensis HOM05D000028 ORTHO05D001176 2.9e-06 54.7 53 52.8
Potri.019G004100 Populus trichocarpa HOM05D000028 ORTHO05D001176 2.9e-06 54.7 58 48.3
arahy.Tifrunner.gnm1.ann1.Y3E92V Arachis hypogaea HOM05D000028 ORTHO05D001176 3.8e-06 54.3 41 53.7
ClCG02G000730 Citrullus lanatus HOM05D000028 ORTHO05D001176 3.8e-06 54.3 51 47.1
COL.COLO4_22396 Corchorus olitorius HOM05D000028 ORTHO05D001176 3.8e-06 54.3 53 47.2
Gohir.A02G137800 Gossypium hirsutum HOM05D000028 ORTHO05D001176 3.8e-06 54.3 53 49.1
Gohir.D03G048500 Gossypium hirsutum HOM05D000028 ORTHO05D001176 3.8e-06 54.3 53 49.1
Gorai.003G049700 Gossypium raimondii HOM05D000028 ORTHO05D001176 3.8e-06 54.3 53 49.1
Lalb_Chr23g0272491 Lupinus albus HOM05D000028 ORTHO05D001176 3.8e-06 54.3 56 44.6
Medtr8g092650 Medicago truncatula HOM05D000028 ORTHO05D001176 3.8e-06 54.3 53 47.2
Migut.J00368 Erythranthe guttata HOM05D000028 ORTHO05D000296 5.0e-06 53.9 52 57.7
Potri.001G307800 Populus trichocarpa HOM05D000028 ORTHO05D001176 5.0e-06 53.9 58 46.6
ATR0712G095 Amborella trichopoda HOM05D000028 ORTHO05D000296 6.5e-06 53.5 55 49.1
Migut.L01290 Erythranthe guttata HOM05D000028 ORTHO05D000296 6.5e-06 53.5 52 53.8
Medtr3g095460 Medicago truncatula HOM05D000028 ORTHO05D001176 6.5e-06 53.5 56 42.9
PGR119G0238 Punica granatum HOM05D000028 ORTHO05D001176 6.5e-06 53.5 56 46.4
Sabra16G0193700 Salix brachista HOM05D000028 ORTHO05D001176 6.5e-06 53.5 58 48.3
SEGI_02002 Sequoiadendron giganteum HOM05D000028 ORTHO05D003251 6.5e-06 53.5 57 47.4
TPR.G2203 Trifolium pratense HOM05D000028 ORTHO05D001176 6.5e-06 53.5 53 47.2
Atru.chr4.573 Acer truncatum HOM05D000028 ORTHO05D001176 8.5e-06 53.1 53 47.2
Actinidia17794 Actinidia chinensis HOM05D000028 ORTHO05D001176 8.5e-06 53.1 52 50.0
Cfa002812 Carpinus fangiana HOM05D000028 ORTHO05D001176 8.5e-06 53.1 58 46.6
Dinv41081 Davidia involucrata HOM05D000028 ORTHO05D001176 8.5e-06 53.1 42 61.9
Dinv41082 Davidia involucrata HOM05D000028 ORTHO05D001176 8.5e-06 53.1 59 45.8
Lj2A577G28 Lonicera japonica HOM05D000028 ORTHO05D001176 8.5e-06 53.1 53 49.1
MD04G1190500 Malus domestica HOM05D000028 ORTHO05D004287 8.5e-06 53.1 59 44.1
SEGI_24047 Sequoiadendron giganteum HOM05D000028 ORTHO05D003251 8.5e-06 53.1 57 47.4
Thecc.01G119700 Theobroma cacao HOM05D000028 ORTHO05D001176 8.5e-06 53.1 53 49.1


User provided reference genes

Program Settings