Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0006G048 Amborella trichopoda HOM05D037035 ORTHO05D069142 6.6e-48 193.7 100 100.0
ATR0006G042 Amborella trichopoda HOM05D037035 ORTHO05D068376 1.2e-20 103.2 59 86.4
ATR0006G065 Amborella trichopoda HOM05D037035 ORTHO05D066988 1.2e-20 103.2 58 87.9
ATR0006G081 Amborella trichopoda HOM05D000028 ORTHO05D000296 2.9e-19 98.6 59 79.7
ATR0712G154 Amborella trichopoda HOM05D000028 ORTHO05D003251 6.2e-14 80.9 57 61.4
ATR0712G046 Amborella trichopoda HOM05D000028 ORTHO05D000296 3.4e-12 75.1 55 58.2
ATR0006G023 Amborella trichopoda HOM05D000028 ORTHO05D000296 2.2e-11 72.4 39 84.6
ATR0712G081 Amborella trichopoda HOM05D000028 ORTHO05D000296 9.3e-10 67.0 55 58.2
ATR0712G024 Amborella trichopoda HOM05D000028 ORTHO05D000296 3.5e-09 65.1 68 51.5
ATR0584G101 Amborella trichopoda HOM05D000028 ORTHO05D000296 2.3e-08 62.4 55 50.9
ATR0712G140 Amborella trichopoda HOM05D000028 ORTHO05D000296 2.3e-08 62.4 55 52.7
ATR0681G075 Amborella trichopoda HOM05D000028 ORTHO05D001176 3.0e-08 62.0 55 49.1
ATR0712G095 Amborella trichopoda HOM05D000028 ORTHO05D000296 1.9e-07 59.3 56 51.8
Dinv15099 Davidia involucrata HOM05D000028 ORTHO05D001176 2.5e-07 58.9 52 55.8
arahy.Tifrunner.gnm1.ann1.0J3BLQ Arachis hypogaea HOM05D000028 ORTHO05D001176 3.3e-07 58.5 51 51.0
Duzib147G0114 Durio zibethinus HOM05D000028 ORTHO05D001176 5.7e-07 57.8 52 53.8
Phvul.002G268800 Phaseolus vulgaris HOM05D000028 ORTHO05D001176 5.7e-07 57.8 55 47.3
THA.LOC104799413 Tarenaya hassleriana HOM05D000028 ORTHO05D001176 5.7e-07 57.8 53 50.9
VMungo0251G2152 Vigna mungo HOM05D000028 ORTHO05D001176 7.4e-07 57.4 55 47.3
Glyma.05G187900 Glycine max HOM05D000028 ORTHO05D001176 9.6e-07 57.0 56 46.4
SEGI_32472 Sequoiadendron giganteum HOM05D000028 ORTHO05D000296 9.6e-07 57.0 56 42.9
VMungo1309G2257 Vigna mungo HOM05D000028 ORTHO05D001176 9.6e-07 57.0 55 45.5
Dinv12125 Davidia involucrata HOM05D000028 ORTHO05D001176 1.3e-06 56.6 55 52.7
Glyma.06G149500 Glycine max HOM05D000028 ORTHO05D001176 1.3e-06 56.6 55 45.5
Phvul.009G147200 Phaseolus vulgaris HOM05D000028 ORTHO05D001176 1.3e-06 56.6 52 48.1
Glyma.08G146100 Glycine max HOM05D000028 ORTHO05D001176 1.6e-06 56.2 56 44.6
Medtr8g092650 Medicago truncatula HOM05D000028 ORTHO05D001176 1.6e-06 56.2 52 48.1
SalBow8G3932 Salvia bowleyana HOM05D000028 ORTHO05D001176 1.6e-06 56.2 66 47.0
CSS0023892 Camellia sinensis var. sinensis HOM05D000028 ORTHO05D001176 2.1e-06 55.8 55 50.9
COL.COLO4_22396 Corchorus olitorius HOM05D000028 ORTHO05D001176 2.1e-06 55.8 52 50.0
Gohir.A02G137800 Gossypium hirsutum HOM05D000028 ORTHO05D001176 2.1e-06 55.8 52 51.9
Gohir.D03G048500 Gossypium hirsutum HOM05D000028 ORTHO05D001176 2.1e-06 55.8 52 51.9
Gorai.003G049700 Gossypium raimondii HOM05D000028 ORTHO05D001176 2.1e-06 55.8 52 51.9
Lalb_Chr08g0238671 Lupinus albus HOM05D000028 ORTHO05D001176 2.1e-06 55.8 55 45.5
Sabra19G0021400 Salix brachista HOM05D000028 ORTHO05D001176 2.1e-06 55.8 55 52.7
Sed0007505 Sechium edule HOM05D000028 ORTHO05D001176 2.1e-06 55.8 52 48.1
SEGI_02002 Sequoiadendron giganteum HOM05D000028 ORTHO05D003251 2.1e-06 55.8 55 49.1
TPR.G2203 Trifolium pratense HOM05D000028 ORTHO05D001176 2.1e-06 55.8 52 48.1
CiPaw.03G129300 Carya illinoinensis HOM05D000028 ORTHO05D001176 2.8e-06 55.5 52 51.9
Potri.019G004100 Populus trichocarpa HOM05D000028 ORTHO05D001176 2.8e-06 55.5 52 53.8
PGR119G0333 Punica granatum HOM05D000028 ORTHO05D001176 2.8e-06 55.5 57 47.4
TAR376G0987 Trochodendron aralioides HOM05D000028 ORTHO05D001176 2.8e-06 55.5 56 51.8
Zm00001eb267200 Zea mays HOM05D000028 ORTHO05D001176 3.7e-06 55.1 52 50.0
Atru.chr4.573 Acer truncatum HOM05D000028 ORTHO05D001176 4.8e-06 54.7 52 50.0
MSTRG.25322 Avicennia marina HOM05D000028 ORTHO05D001176 4.8e-06 54.7 55 54.5
ClCG04G005820 Citrullus lanatus HOM05D000028 ORTHO05D000296 4.8e-06 54.7 56 50.0
Nn1g06082 Nelumbo nucifera HOM05D000028 ORTHO05D001176 4.8e-06 54.7 53 49.1
Potri.001G307800 Populus trichocarpa HOM05D000028 ORTHO05D001176 4.8e-06 54.7 52 51.9
Sed0014355 Sechium edule HOM05D000028 ORTHO05D000296 4.8e-06 54.7 56 50.0
Solyc12g099580.2 Solanum lycopersicum HOM05D000028 ORTHO05D001812 4.8e-06 54.7 53 45.3
Thecc.01G119700 Theobroma cacao HOM05D000028 ORTHO05D001176 4.8e-06 54.7 52 51.9
CDE04G3277 Ceratophyllum demersum HOM05D000028 ORTHO05D001812 6.2e-06 54.3 58 43.1
FvH4_1g23640 Fragaria vesca HOM05D000028 ORTHO05D001176 6.2e-06 54.3 61 45.9
FAN19G1347 Fragaria x ananassa HOM05D000028 ORTHO05D001176 6.2e-06 54.3 61 45.9
FAN23G0364 Fragaria x ananassa HOM05D000028 ORTHO05D001176 6.2e-06 54.3 61 45.9
FAN26G1978 Fragaria x ananassa HOM05D000028 ORTHO05D001176 6.2e-06 54.3 61 45.9
FAN28G2706 Fragaria x ananassa HOM05D000028 ORTHO05D001176 6.2e-06 54.3 61 45.9
Sabra16G0193700 Salix brachista HOM05D000028 ORTHO05D001176 6.2e-06 54.3 55 50.9
SEGI_38573 Sequoiadendron giganteum HOM05D000028 ORTHO05D004476 6.2e-06 54.3 55 45.5
Thecc.08G151800 Theobroma cacao HOM05D000028 ORTHO05D001176 6.2e-06 54.3 53 54.7
Cfa002812 Carpinus fangiana HOM05D000028 ORTHO05D001176 8.2e-06 53.9 55 47.3
MELO3C019125.2 Cucumis melo HOM05D000028 ORTHO05D000296 8.2e-06 53.9 56 48.2
Duzib116G0369 Durio zibethinus HOM05D000028 ORTHO05D001176 8.2e-06 53.9 52 55.8
Lj2A577G28 Lonicera japonica HOM05D000028 ORTHO05D001176 8.2e-06 53.9 52 50.0
Lalb_Chr11g0068221 Lupinus albus HOM05D000028 ORTHO05D001176 8.2e-06 53.9 56 44.6
Nitab4.5_0004021g0050 Nicotiana tabacum HOM05D000028 ORTHO05D001176 8.2e-06 53.9 56 51.8
PGR119G0238 Punica granatum HOM05D000028 ORTHO05D001176 8.2e-06 53.9 55 45.5
Sp2g27770 Schrenkiella parvula HOM05D000028 ORTHO05D001176 8.2e-06 53.9 53 45.3
SEGI_24047 Sequoiadendron giganteum HOM05D000028 ORTHO05D003251 8.2e-06 53.9 57 43.9
Solyc01g066850.4 Solanum lycopersicum HOM05D000028 ORTHO05D001812 8.2e-06 53.9 55 45.5
Sopen01g028450 Solanum pennellii HOM05D000028 ORTHO05D001812 8.2e-06 53.9 55 45.5
PGSC0003DMG400004636 Solanum tuberosum HOM05D000028 ORTHO05D001812 8.2e-06 53.9 53 45.3


User provided reference genes

Program Settings