Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0003G028 Amborella trichopoda HOM05D005065 ORTHO05D005944 1.7e-101 372.9 213 100.0
ATR0820G021 Amborella trichopoda HOM05D005065 ORTHO05D005944 1.6e-88 329.7 214 91.6
CiPaw.07G160300 Carya illinoinensis HOM05D005065 ORTHO05D005944 2.0e-17 93.6 226 36.7
QL02p033454 Quercus lobata HOM05D005065 ORTHO05D005944 3.7e-16 89.4 216 34.7
Duzib177G1167 Durio zibethinus HOM05D005065 ORTHO05D005944 4.9e-16 89.0 210 41.0
Haze_22517 Corylus avellana HOM05D005065 ORTHO05D005944 1.1e-15 87.8 219 34.2
Cfa013844 Carpinus fangiana HOM05D005065 ORTHO05D005944 2.4e-15 86.7 229 34.1
Nn1g08370 Nelumbo nucifera HOM05D005065 ORTHO05D005944 2.4e-15 86.7 191 39.3
Manes.18G101500 Manihot esculenta HOM05D005065 ORTHO05D005944 4.1e-15 85.9 190 36.8
TPR.G8826 Trifolium pratense HOM05D005065 ORTHO05D005944 5.4e-15 85.5 208 35.1
Ca_10622_v3 Cicer arietinum L. HOM05D005065 ORTHO05D005944 9.2e-15 84.7 207 35.7
PGSC0003DMG400026113 Solanum tuberosum HOM05D005065 ORTHO05D005944 9.2e-15 84.7 191 37.7
Phvul.007G088700 Phaseolus vulgaris HOM05D005065 ORTHO05D005944 1.2e-14 84.3 205 42.4
Glyma.10G217400 Glycine max HOM05D005065 ORTHO05D005944 2.0e-14 83.6 200 36.5
Gohir.A05G275300 Gossypium hirsutum HOM05D005065 ORTHO05D005944 2.0e-14 83.6 192 35.9
Gohir.A13G121100 Gossypium hirsutum HOM05D005065 ORTHO05D005944 2.7e-14 83.2 177 42.9
Oeu029996.1 Olea europaea HOM05D005065 ORTHO05D005944 2.7e-14 83.2 210 37.1
Gohir.D13G125200 Gossypium hirsutum HOM05D005065 ORTHO05D005944 3.5e-14 82.8 175 42.3
Gorai.013G140100 Gossypium raimondii HOM05D005065 ORTHO05D005944 3.5e-14 82.8 175 42.3
Duzib211G0507 Durio zibethinus HOM05D005065 ORTHO05D005944 4.6e-14 82.4 177 37.9
Solyc06g065340.1 Solanum lycopersicum HOM05D005065 ORTHO05D005944 4.6e-14 82.4 164 37.2
Potri.013G111700 Populus trichocarpa HOM05D005065 ORTHO05D005944 7.8e-14 81.6 221 33.5
Gohir.D05G277400 Gossypium hirsutum HOM05D005065 ORTHO05D005944 1.0e-13 81.3 177 36.7
Gorai.009G290400 Gossypium raimondii HOM05D005065 ORTHO05D005944 1.0e-13 81.3 177 36.7
Cc00_g13630 Coffea canephora HOM05D005065 ORTHO05D005944 1.7e-13 80.5 217 37.8
Sopen06g023830 Solanum pennellii HOM05D005065 ORTHO05D005944 1.7e-13 80.5 171 37.4
Migut.C01259 Erythranthe guttata HOM05D005065 ORTHO05D005944 3.0e-13 79.7 187 36.4
VMungo0720G1099 Vigna mungo HOM05D005065 ORTHO05D005944 3.0e-13 79.7 196 36.2
Psat6g187880 Pisum sativum HOM05D005065 ORTHO05D005944 3.9e-13 79.3 200 35.0
CiPaw.08G058800 Carya illinoinensis HOM05D005065 ORTHO05D005944 6.6e-13 78.6 221 30.8
Peaxi162Scf00268g00105 Petunia axillaris HOM05D005065 ORTHO05D005944 6.6e-13 78.6 217 34.6
Aqoxy5G02380 Aquilegia oxysepala HOM05D005065 ORTHO05D005944 8.6e-13 78.2 178 38.8
CAN.G199.8 Capsicum annuum HOM05D005065 ORTHO05D005944 8.6e-13 78.2 162 35.8
Lalb_Chr21g0305721 Lupinus albus HOM05D005065 ORTHO05D005944 1.5e-12 77.4 196 33.7
Lalb_Chr03g0036131 Lupinus albus HOM05D005065 ORTHO05D005944 4.3e-12 75.9 210 34.3
Dinv15081 Davidia involucrata HOM05D005065 ORTHO05D005944 5.6e-12 75.5 205 37.6
Lj5g0001381 Lotus japonicus HOM05D005065 ORTHO05D005944 7.3e-12 75.1 204 36.8
Nn5g27677 Nelumbo nucifera HOM05D005065 ORTHO05D005944 9.5e-12 74.7 222 34.2
Thecc.08G184600 Theobroma cacao HOM05D005065 ORTHO05D005944 1.2e-11 74.3 231 33.8
DCAR_011533 Daucus carota HOM05D005065 ORTHO05D005944 1.6e-11 73.9 211 35.1
Prupe.8G058900 Prunus persica HOM05D005065 ORTHO05D005944 2.1e-11 73.6 166 32.5
Oeu017883.1 Olea europaea HOM05D005065 ORTHO05D005944 2.8e-11 73.2 145 34.5
MSTRG.25443 Avicennia marina HOM05D005065 ORTHO05D005944 3.6e-11 72.8 176 35.2
Dinv41716 Davidia involucrata HOM05D005065 ORTHO05D005944 3.6e-11 72.8 157 36.9
SalBow7G0321 Salvia bowleyana HOM05D005065 ORTHO05D005944 4.7e-11 72.4 151 34.4
Lalb_Chr06g0162001 Lupinus albus HOM05D005065 ORTHO05D005944 6.2e-11 72.0 197 34.0
MSTRG.22454 Avicennia marina HOM05D005065 ORTHO05D005944 8.1e-11 71.6 193 34.7
Glyma.20G174600 Glycine max HOM05D005065 ORTHO05D005944 1.4e-10 70.9 153 35.9
Rhsim06G0094100 Rhododendron simsii HOM05D005065 ORTHO05D005944 1.4e-10 70.9 173 39.3
TAR624G0039 Trochodendron aralioides HOM05D005065 ORTHO05D005944 1.4e-10 70.9 164 31.7
Lalb_Chr19g0129461 Lupinus albus HOM05D005065 ORTHO05D005944 2.3e-10 70.1 194 38.1
PGR042G0986 Punica granatum HOM05D005065 ORTHO05D005944 3.1e-10 69.7 157 33.8
ClCG11G008090 Citrullus lanatus HOM05D005065 ORTHO05D005944 5.2e-10 68.9 204 33.8
Ciclev10002433m.g Citrus clementina HOM05D005065 ORTHO05D005944 5.2e-10 68.9 156 33.3
Cpa.g.sc66.33 Carica papaya HOM05D005065 ORTHO05D005944 6.8e-10 68.6 224 30.8
Eucgr.F02608 Eucalyptus grandis HOM05D005065 ORTHO05D005944 6.8e-10 68.6 188 31.4
Lalb_Chr02g0141751 Lupinus albus HOM05D005065 ORTHO05D005944 6.8e-10 68.6 152 34.9
MELO3C008125.2 Cucumis melo HOM05D005065 ORTHO05D005944 1.2e-09 67.8 192 34.4
SGA_v2.0_scaffold24G10554 Striga asiatica HOM05D005065 ORTHO05D005944 1.5e-09 67.4 170 40.0
CSS0016137 Camellia sinensis var. sinensis HOM05D005065 ORTHO05D005944 2.0e-09 67.0 163 36.8
MSTRG.1526 Avicennia marina HOM05D005065 ORTHO05D005944 2.6e-09 66.6 204 34.3
Potri.019G082866 Populus trichocarpa HOM05D005065 ORTHO05D005944 2.6e-09 66.6 197 34.0
Sed0021334 Sechium edule HOM05D005065 ORTHO05D005944 3.4e-09 66.2 190 35.8
Manes.02G192500 Manihot esculenta HOM05D005065 ORTHO05D005944 4.4e-09 65.9 174 33.9
Atru.chr13.1737 Acer truncatum HOM05D005065 ORTHO05D005944 7.5e-09 65.1 167 31.7
Actinidia23336 Actinidia chinensis HOM05D005065 ORTHO05D005944 7.5e-09 65.1 165 33.9
FAN15G3279 Fragaria x ananassa HOM05D005065 ORTHO05D005944 7.5e-09 65.1 189 32.3
Actinidia02576 Actinidia chinensis HOM05D005065 ORTHO05D005944 9.8e-09 64.7 169 34.9
TWI60G1480 Tripterygium wilfordii HOM05D005065 ORTHO05D005944 9.8e-09 64.7 196 34.2
PGSC0003DMG400014033 Solanum tuberosum HOM05D005065 ORTHO05D005944 1.3e-08 64.3 178 33.1
Gorai.006G130800 Gossypium raimondii HOM05D005065 ORTHO05D005944 2.2e-08 63.5 179 40.2
Peaxi162Scf01013g00001 Petunia axillaris HOM05D005065 ORTHO05D005944 2.9e-08 63.2 217 30.0
Sabra13G0095100 Salix brachista HOM05D005065 ORTHO05D005944 3.7e-08 62.8 186 33.9
Carub.0001s2220 Capsella rubella HOM05D005065 ORTHO05D005944 1.1e-07 61.2 176 35.2
Gohir.D09G113300 Gossypium hirsutum HOM05D005065 ORTHO05D005944 1.1e-07 61.2 181 38.7
Lalb_Chr01g0010191 Lupinus albus HOM05D005065 ORTHO05D005944 1.1e-07 61.2 198 32.8
Hma1.2p1_0937F.1_g239030 Hydrangea macrophylla HOM05D005065 ORTHO05D005944 1.4e-07 60.8 198 31.3
HanXRQChr05g0150531 Helianthus annuus HOM05D005065 ORTHO05D005944 1.9e-07 60.5 178 32.0
A07p30470 Brassica napus HOM05D005065 ORTHO05D005944 2.4e-07 60.1 189 33.3
BraA07t30683Z Brassica rapa HOM05D005065 ORTHO05D005944 2.4e-07 60.1 189 33.3
Solyc11g018710.1 Solanum lycopersicum HOM05D005065 ORTHO05D005944 2.4e-07 60.1 177 31.6
Gohir.A09G116200 Gossypium hirsutum HOM05D005065 ORTHO05D005944 3.2e-07 59.7 179 38.5
Sopen11g009740 Solanum pennellii HOM05D005065 ORTHO05D005944 3.2e-07 59.7 188 30.9
SGA_v2.0_scaffold149G36582 Striga asiatica HOM05D005065 ORTHO05D005944 7.1e-07 58.5 190 32.1
CDE06G2798 Ceratophyllum demersum HOM05D005065 ORTHO05D005944 9.2e-07 58.2 142 36.6
Hma1.2p1_0060F.1_g032900 Hydrangea macrophylla HOM05D005065 ORTHO05D005944 9.2e-07 58.2 212 30.2
Ah.05g178140 Amaranthus hybridus HOM05D005065 ORTHO05D005944 1.2e-06 57.8 189 34.4
MBI09_g14012_MAGBIO Magnolia biondii HOM05D005065 ORTHO05D005944 1.2e-06 57.8 185 33.0
MD05G1042300 Malus domestica HOM05D005065 ORTHO05D005944 1.2e-06 57.8 221 30.3
RcHm_v2.0_Chr6g0270871 Rosa chinensis HOM05D005065 ORTHO05D005944 1.2e-06 57.8 193 34.2
Rhsim11G0058500 Rhododendron simsii HOM05D005065 ORTHO05D005944 1.6e-06 57.4 165 31.5
PSO782G1863 Papaver somniferum HOM05D005065 ORTHO05D005944 2.7e-06 56.6 178 31.5
Oeu021210.1 Olea europaea HOM05D005065 ORTHO05D005944 3.5e-06 56.2 187 31.6
HPP92_009270 Vanilla planifolia HOM05D005065 ORTHO05D005944 6.0e-06 55.5 218 29.4


User provided reference genes

Program Settings