Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0001G054 Amborella trichopoda HOM05D004544 ORTHO05D005504 2.2e-235 818.5 411 100.0
Aqoxy1G00422 Aquilegia oxysepala HOM05D004544 ORTHO05D005504 8.4e-166 587.4 397 72.3
Nn2g15791 Nelumbo nucifera HOM05D004544 ORTHO05D005504 1.0e-163 580.5 397 72.3
TAR633G2617 Trochodendron aralioides HOM05D004544 ORTHO05D005504 1.0e-163 580.5 386 73.3
MBI01_g14445_MAGBIO Magnolia biondii HOM05D004544 ORTHO05D005504 1.3e-163 580.1 410 70.5
CAN.G1361.5 Capsicum annuum HOM05D004544 ORTHO05D005504 1.5e-162 576.6 394 70.3
GSVIVG01001349001 Vitis vinifera HOM05D004544 ORTHO05D005504 3.3e-162 575.5 390 71.8
Solyc01g073660.3 Solanum lycopersicum HOM05D004544 ORTHO05D005504 3.7e-161 572.0 390 70.0
Oeu060709.1 Olea europaea HOM05D004544 ORTHO05D005504 4.8e-161 571.6 390 70.8
Sopen01g033220 Solanum pennellii HOM05D004544 ORTHO05D005504 4.8e-161 571.6 390 70.0
RcHm_v2.0_Chr1g0313141 Rosa chinensis HOM05D004544 ORTHO05D005504 6.2e-161 571.2 394 70.8
FvH4_c5g00010 Fragaria vesca HOM05D004544 ORTHO05D005504 8.2e-161 570.9 394 70.6
PSO170G0355 Papaver somniferum HOM05D004544 ORTHO05D005504 8.2e-161 570.9 389 71.0
Cc02_g26820 Coffea canephora HOM05D004544 ORTHO05D005504 6.9e-160 567.8 390 71.0
PSO063G0048 Papaver somniferum HOM05D004544 ORTHO05D005504 6.9e-160 567.8 389 70.7
MD02G1320400 Malus domestica HOM05D004544 ORTHO05D005504 3.4e-159 565.5 398 70.4
vmacro22467 Vaccinium macrocarpon HOM05D004544 ORTHO05D005504 3.4e-159 565.5 413 68.8
FAN01G0284 Fragaria x ananassa HOM05D004544 ORTHO05D005504 4.5e-159 565.1 394 69.8
Nn7g35919 Nelumbo nucifera HOM05D004544 ORTHO05D005504 4.5e-159 565.1 384 71.9
CSS0044763 Camellia sinensis var. sinensis HOM05D004544 ORTHO05D005504 1.7e-158 563.1 399 68.9
Rhsim07G0049300 Rhododendron simsii HOM05D004544 ORTHO05D005504 3.8e-158 562.0 397 70.5
AUR62035404 Chenopodium quinoa HOM05D004544 ORTHO05D005504 5.0e-158 561.6 402 68.2
EL10Ac1g02232 Beta vulgaris HOM05D004544 ORTHO05D005504 6.5e-158 561.2 400 68.2
EL10Ac1g02233 Beta vulgaris HOM05D004544 ORTHO05D005504 6.5e-158 561.2 400 68.2
Dinv43503 Davidia involucrata HOM05D004544 ORTHO05D005504 2.5e-157 559.3 406 69.0
Actinidia05839 Actinidia chinensis HOM05D004544 ORTHO05D005504 3.2e-157 558.9 399 69.2
CiPaw.13G000600 Carya illinoinensis HOM05D004544 ORTHO05D005504 5.5e-157 558.1 388 70.1
CDE04G3336 Ceratophyllum demersum HOM05D004544 ORTHO05D005504 1.2e-156 557.0 385 71.2
Sc03g0003850 Simmondsia chinensis HOM05D004544 ORTHO05D005504 6.1e-156 554.7 385 69.6
Eucgr.E04336 Eucalyptus grandis HOM05D004544 ORTHO05D005504 1.0e-155 553.9 394 68.3
Glyma.15G267700 Glycine max HOM05D004544 ORTHO05D005504 1.0e-155 553.9 389 69.2
Thecc.08G193200 Theobroma cacao HOM05D004544 ORTHO05D005504 1.3e-155 553.5 390 70.0
Hma1.2p1_0128F.1_g059850 Hydrangea macrophylla HOM05D004544 ORTHO05D005504 2.3e-155 552.7 385 70.6
Nn2g15790 Nelumbo nucifera HOM05D004544 ORTHO05D005504 2.3e-155 552.7 399 68.2
Duzib068G1099 Durio zibethinus HOM05D004544 ORTHO05D005504 5.1e-155 551.6 394 69.5
SGA_v2.0_scaffold260G45890 Striga asiatica HOM05D004544 ORTHO05D005504 5.1e-155 551.6 415 65.1
HPP92_012523 Vanilla planifolia HOM05D004544 ORTHO05D005504 6.7e-155 551.2 384 70.3
Carub.0005s2680 Capsella rubella HOM05D004544 ORTHO05D005504 8.7e-155 550.8 396 68.4
Cpa.g.c29747 Carica papaya HOM05D004544 ORTHO05D005504 1.1e-154 550.4 390 69.7
Cfa010700 Carpinus fangiana HOM05D004544 ORTHO05D005504 1.1e-154 550.4 394 68.8
Thhalv10005961m.g Eutrema salsugineum HOM05D004544 ORTHO05D005504 2.5e-154 549.3 396 68.2
Glyma.08G158600 Glycine max HOM05D004544 ORTHO05D005504 3.3e-154 548.9 389 68.6
ECA236G1315 Erigeron canadensis HOM05D004544 ORTHO05D005504 4.3e-154 548.5 387 67.7
Ciclev10031412m.g Citrus clementina HOM05D004544 ORTHO05D005504 5.7e-154 548.1 390 67.4
HanXRQChr04g0117441 Helianthus annuus HOM05D004544 ORTHO05D005504 7.4e-154 547.7 383 67.9
VMungo1080G0174 Vigna mungo HOM05D004544 ORTHO05D005504 7.4e-154 547.7 389 67.9
Gohir.D08G037000 Gossypium hirsutum HOM05D004544 ORTHO05D005504 9.7e-154 547.4 394 68.5
Gorai.004G035000 Gossypium raimondii HOM05D004544 ORTHO05D005504 9.7e-154 547.4 394 68.5
arahy.Tifrunner.gnm1.ann1.HLF3VC Arachis hypogaea HOM05D004544 ORTHO05D005504 1.6e-153 546.6 422 64.9
Phvul.005G042600 Phaseolus vulgaris HOM05D004544 ORTHO05D005504 1.6e-153 546.6 389 67.9
AL5G42260 Arabidopsis lyrata HOM05D004544 ORTHO05D005504 3.7e-153 545.4 396 67.9
CARHR139460 Cardamine hirsuta HOM05D004544 ORTHO05D005504 3.7e-153 545.4 405 66.9
AT3G60070 Arabidopsis thaliana HOM05D004544 ORTHO05D005504 4.8e-153 545.0 396 67.9
arahy.Tifrunner.gnm1.ann1.ZSC88Q Arachis hypogaea HOM05D004544 ORTHO05D005504 4.8e-153 545.0 422 64.9
Lalb_Chr25g0283741 Lupinus albus HOM05D004544 ORTHO05D005504 4.8e-153 545.0 390 68.5
AT2G44280 Arabidopsis thaliana HOM05D004544 ORTHO05D005504 6.3e-153 544.7 399 67.4
Manes.10G153000 Manihot esculenta HOM05D004544 ORTHO05D005504 6.3e-153 544.7 391 69.1
Potri.009G024600 Populus trichocarpa HOM05D004544 ORTHO05D005504 6.3e-153 544.7 394 66.5
Atru.chr12.1432 Acer truncatum HOM05D004544 ORTHO05D005504 8.2e-153 544.3 404 66.3
AL4G43240 Arabidopsis lyrata HOM05D004544 ORTHO05D005504 1.4e-152 543.5 388 68.6
CANSAT11G0055 Cannabis sativa HOM05D004544 ORTHO05D005504 1.4e-152 543.5 390 68.2
DCAR_024995 Daucus carota HOM05D004544 ORTHO05D005504 1.4e-152 543.5 390 68.7
Lj3g0003623 Lotus japonicus HOM05D004544 ORTHO05D005504 1.8e-152 543.1 390 67.7
PGR031G1320 Punica granatum HOM05D004544 ORTHO05D005504 2.4e-152 542.7 390 69.2
Carub.0004s2687 Capsella rubella HOM05D004544 ORTHO05D005504 3.1e-152 542.3 394 67.3
BolC4t24833H Brassica oleracea HOM05D004544 ORTHO05D005504 4.1e-152 542.0 402 66.7
Medtr2g062270 Medicago truncatula HOM05D004544 ORTHO05D005504 4.1e-152 542.0 390 67.2
C04p32650 Brassica napus HOM05D004544 ORTHO05D005504 5.3e-152 541.6 397 67.8
Sp4g26350 Schrenkiella parvula HOM05D004544 ORTHO05D005504 5.3e-152 541.6 399 67.4
Sp5g03140 Schrenkiella parvula HOM05D004544 ORTHO05D005504 5.3e-152 541.6 396 66.9
A04p01890 Brassica napus HOM05D004544 ORTHO05D005504 9.0e-152 540.8 397 67.5
BraA04t15912Z Brassica rapa HOM05D004544 ORTHO05D005504 9.0e-152 540.8 397 67.3
BcaC02g10108 Brassica carinata HOM05D004544 ORTHO05D005504 1.5e-151 540.0 397 67.5
Os07g0578200 Oryza sativa ssp. japonica HOM05D004544 ORTHO05D005504 1.5e-151 540.0 400 67.8
Potri.001G232100 Populus trichocarpa HOM05D004544 ORTHO05D005504 1.5e-151 540.0 403 65.8
TWI09G1596 Tripterygium wilfordii HOM05D004544 ORTHO05D005504 2.6e-151 539.3 390 66.9
BcaNung06603 Brassica carinata HOM05D004544 ORTHO05D005504 7.7e-151 537.7 388 68.0
BolC4t22159H Brassica oleracea HOM05D004544 ORTHO05D005504 7.7e-151 537.7 388 68.0
BraA05t19424Z Brassica rapa HOM05D004544 ORTHO05D005504 7.7e-151 537.7 388 68.0
A05p04480 Brassica napus HOM05D004544 ORTHO05D005504 1.0e-150 537.3 388 67.8
Aa31LG10G14230 Aethionema arabicum HOM05D004544 ORTHO05D005504 1.7e-150 536.6 394 66.2
BcaB02g08807 Brassica carinata HOM05D004544 ORTHO05D005504 2.2e-150 536.2 388 67.8
Ca_03221_v3 Cicer arietinum L. HOM05D004544 ORTHO05D005504 2.2e-150 536.2 391 66.5
SalBow5G3691 Salvia bowleyana HOM05D004544 ORTHO05D005504 2.2e-150 536.2 412 64.3
PGSC0003DMG400031131 Solanum tuberosum HOM05D004544 ORTHO05D005504 2.2e-150 536.2 390 67.2
Lsat_1_v5_gn_7_33840 Lactuca sativa HOM05D004544 ORTHO05D005504 3.8e-150 535.4 382 67.8
THA.LOC104817137 Tarenaya hassleriana HOM05D004544 ORTHO05D005504 8.5e-150 534.3 390 68.2
C04p05190 Brassica napus HOM05D004544 ORTHO05D005504 1.9e-149 533.1 388 67.8
Os03g0168000 Oryza sativa ssp. japonica HOM05D004544 ORTHO05D005504 1.9e-149 533.1 387 68.2
BcaB02g08195 Brassica carinata HOM05D004544 ORTHO05D005504 2.5e-149 532.7 397 67.0
TAR633G0112 Trochodendron aralioides HOM05D004544 ORTHO05D005504 3.2e-149 532.3 359 73.0
CsaV3_7G031530 Cucumis sativus L. HOM05D004544 ORTHO05D005504 5.5e-149 531.6 385 68.1
C04p70950 Brassica napus HOM05D004544 ORTHO05D005504 1.6e-148 530.0 390 67.7
BolC4t28598H Brassica oleracea HOM05D004544 ORTHO05D005504 1.6e-148 530.0 390 67.7
A04p33250 Brassica napus HOM05D004544 ORTHO05D005504 3.6e-148 528.9 383 68.4
BraA04t18786Z Brassica rapa HOM05D004544 ORTHO05D005504 3.6e-148 528.9 383 68.4
Thhalv10001436m.g Eutrema salsugineum HOM05D004544 ORTHO05D005504 6.1e-148 528.1 388 67.0
Psat1g129360 Pisum sativum HOM05D004544 ORTHO05D005504 1.8e-147 526.6 385 66.2
Peaxi162Scf00402g00941 Petunia axillaris HOM05D004544 ORTHO05D005504 3.0e-147 525.8 400 64.0
unitig_749.g13487 Utricularia gibba HOM05D004544 ORTHO05D005504 5.1e-147 525.0 399 64.9
Zm00001eb325500 Zea mays HOM05D004544 ORTHO05D005504 1.5e-146 523.5 412 64.6
AUR62041888 Chenopodium quinoa HOM05D004544 ORTHO05D005504 4.3e-146 521.9 485 56.1
TPR.G16160 Trifolium pratense HOM05D004544 ORTHO05D005504 1.7e-145 520.0 395 64.8
Haze_03276 Corylus avellana HOM05D004544 ORTHO05D005504 4.8e-145 518.5 394 66.0
Aa31LG1G25900 Aethionema arabicum HOM05D004544 ORTHO05D005504 1.8e-144 516.5 418 62.9
CDE05G1716 Ceratophyllum demersum HOM05D004544 ORTHO05D005504 3.1e-144 515.8 433 61.0
Zm00001eb402450 Zea mays HOM05D004544 ORTHO05D005504 4.1e-144 515.4 385 66.0
ClCG09G003650 Citrullus lanatus HOM05D004544 ORTHO05D005504 1.5e-143 513.5 440 60.5
Mapoly0020s0019 Marchantia polymorpha HOM05D004544 ORTHO05D005504 2.0e-143 513.1 383 66.6
Sed0009480 Sechium edule HOM05D004544 ORTHO05D005504 2.0e-143 513.1 385 66.2
BcaB06g29367 Brassica carinata HOM05D004544 ORTHO05D005504 2.9e-142 509.2 411 63.7
Gohir.A08G026600 Gossypium hirsutum HOM05D004544 ORTHO05D005504 6.7e-139 498.0 394 63.5
Nitab4.5_0000468g0180 Nicotiana tabacum HOM05D004544 ORTHO05D005504 9.7e-138 494.2 399 61.4
Nitab4.5_0004502g0040 Nicotiana tabacum HOM05D004544 ORTHO05D005504 7.7e-135 484.6 391 60.9
Pp3c17_11410 Physcomitrium patens HOM05D004544 ORTHO05D005504 2.2e-134 483.0 386 60.9
Peaxi162Scf00245g00710 Petunia axillaris HOM05D004544 ORTHO05D005504 2.6e-130 469.5 394 58.9
AagrBONN_evm.TU.Sc2ySwM_368.1671 Anthoceros agrestis HOM05D004544 ORTHO05D005504 4.4e-130 468.8 385 58.4
Sopen10g026790 Solanum pennellii HOM05D004544 ORTHO05D005504 7.4e-130 468.0 385 59.7
SMO353G0186 Selaginella moellendorffii HOM05D004544 ORTHO05D005504 1.3e-129 467.2 391 58.3
CAN.G928.1 Capsicum annuum HOM05D004544 ORTHO05D005504 1.4e-128 463.8 385 58.4
FAN01G3148 Fragaria x ananassa HOM05D004544 ORTHO05D005504 8.5e-126 454.5 348 65.8
CAN.G1361.4 Capsicum annuum HOM05D004544 ORTHO05D005504 1.2e-119 434.1 399 53.1
Sopen01g033230 Solanum pennellii HOM05D004544 ORTHO05D005504 4.0e-115 419.1 400 52.0
Solyc01g073670.3 Solanum lycopersicum HOM05D004544 ORTHO05D005504 5.2e-115 418.7 400 52.0
QL04p001964 Quercus lobata HOM05D004544 ORTHO05D005504 1.3e-113 414.1 276 72.1
Peaxi162Scf00402g00940 Petunia axillaris HOM05D004544 ORTHO05D005504 3.5e-111 406.0 395 51.1
FAN01G0042 Fragaria x ananassa HOM05D004544 ORTHO05D005504 5.9e-111 405.2 416 55.0
SEGI_30614 Sequoiadendron giganteum HOM05D004544 ORTHO05D005504 7.5e-106 388.3 253 75.1
Atru.chr11.2714 Acer truncatum HOM05D004544 ORTHO05D005504 1.9e-101 373.6 408 49.8
PGSC0003DMG400023279 Solanum tuberosum HOM05D004544 ORTHO05D005504 1.7e-97 360.5 385 50.9
PGSC0003DMG400007701 Solanum tuberosum HOM05D004544 ORTHO05D005504 1.3e-94 350.9 385 48.3
FAN06G4582 Fragaria x ananassa HOM05D004544 ORTHO05D005504 2.6e-90 336.7 272 63.6
Prupe.2G001700 Prunus persica HOM05D004544 ORTHO05D005504 5.8e-90 335.5 259 64.5
PGSC0003DMG400028978 Solanum tuberosum HOM05D004544 ORTHO05D005504 1.4e-75 287.7 399 41.6
CARHR170380 Cardamine hirsuta HOM05D004544 ORTHO05D005504 1.8e-75 287.3 237 60.3
Zm00001eb107640 Zea mays HOM05D004544 ORTHO05D005504 2.0e-74 283.9 201 70.6
Sabra09G0016300 Salix brachista HOM05D004544 ORTHO05D005504 7.1e-56 222.2 258 48.1
Migut.B01407 Erythranthe guttata HOM05D004544 ORTHO05D005504 7.9e-55 218.8 129 75.2
Migut.B01408 Erythranthe guttata HOM05D004544 ORTHO05D005504 2.3e-54 217.2 158 67.1
MELO3C023501.2 Cucumis melo HOM05D004544 ORTHO05D005504 1.3e-49 201.4 385 35.1
Actinidia31716 Actinidia chinensis HOM05D004544 ORTHO05D005504 6.5e-49 199.1 158 61.4
SEGI_18579 Sequoiadendron giganteum HOM05D004544 ORTHO05D005504 4.3e-45 186.4 135 65.2
Psat2g024040 Pisum sativum HOM05D004544 ORTHO05D005504 1.0e-38 165.2 180 48.9
MELO3C000237.2 Cucumis melo HOM05D004544 ORTHO05D005504 4.8e-36 156.4 121 65.3
QL04p001975 Quercus lobata HOM05D004544 ORTHO05D005504 1.4e-35 154.8 121 60.3
Solyc01g089990.3 Solanum lycopersicum HOM05D004544 ORTHO05D005504 7.9e-31 139.0 94 71.3
Os06g0628032 Oryza sativa ssp. japonica HOM05D004544 ORTHO05D005504 2.0e-26 124.4 101 58.4
Lj7A562T25 Lonicera japonica HOM05D004544 ORTHO05D005504 6.1e-23 112.8 111 51.4
Hund18992 Selenicereus undatus HOM05D004544 ORTHO05D005504 1.3e-20 105.1 66 74.2
Migut.B01409 Erythranthe guttata HOM05D004544 ORTHO05D005504 9.1e-19 99.0 76 64.5
QL04p001512 Quercus lobata HOM05D004544 ORTHO05D001929 3.2e-16 90.5 72 58.3
Actinidia31717 Actinidia chinensis HOM05D004544 ORTHO05D005504 1.0e-14 85.5 59 66.1
Glyma.20G091501 Glycine max HOM05D004544 ORTHO05D005504 7.5e-13 79.3 60 61.7
CAN.G913.7 Capsicum annuum HOM05D004544 ORTHO05D005504 8.2e-12 75.9 63 61.9
QL04p001505 Quercus lobata HOM05D004544 ORTHO05D005504 2.4e-11 74.3 41 75.6
Nitab4.5_0006570g0020 Nicotiana tabacum HOM05D004544 ORTHO05D005504 1.1e-08 65.5 36 80.6
Haze_14723 Corylus avellana HOM05D004544 ORTHO05D005504 9.4e-08 62.4 78 43.6
FvH4_5g06577 Fragaria vesca HOM05D000025 ORTHO05D000040 1.8e-06 58.2 37 78.4
Nitab4.5_0000468g0200 Nicotiana tabacum HOM05D004544 ORTHO05D283929 5.2e-06 56.6 157 31.8


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