Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0001G043 Amborella trichopoda HOM05D007176 ORTHO05D009050 1.2e-132 476.9 319 100.0
Thecc.05G178200 Theobroma cacao HOM05D007176 ORTHO05D009050 1.6e-47 194.1 289 53.3
COL.COLO4_29390 Corchorus olitorius HOM05D007176 ORTHO05D009050 4.9e-44 182.6 233 73.0
Duzib106G0399 Durio zibethinus HOM05D007176 ORTHO05D009050 1.1e-43 181.4 289 52.6
Dinv16365 Davidia involucrata HOM05D007176 ORTHO05D009050 1.0e-41 174.9 275 53.8
Gohir.A04G053500 Gossypium hirsutum HOM05D007176 ORTHO05D009050 6.6e-41 172.2 289 48.1
THA.LOC104802720 Tarenaya hassleriana HOM05D007176 ORTHO05D009050 8.6e-41 171.8 234 55.1
Aa31LG10G13110 Aethionema arabicum HOM05D007176 ORTHO05D009050 1.6e-39 167.5 289 45.7
RcHm_v2.0_Chr3g0478871 Rosa chinensis HOM05D007176 ORTHO05D009050 2.8e-39 166.8 275 48.7
Sp5g04340 Schrenkiella parvula HOM05D007176 ORTHO05D009050 8.9e-38 161.8 186 61.8
GSVIVG01033441001 Vitis vinifera HOM05D007176 ORTHO05D009050 1.5e-37 161.0 263 53.6
A09p51090 Brassica napus HOM05D007176 ORTHO05D009050 2.2e-36 157.1 268 47.4
CARHR168930 Cardamine hirsuta HOM05D007176 ORTHO05D009050 4.9e-36 156.0 188 59.6
Sopen06g001340 Solanum pennellii HOM05D007176 ORTHO05D009050 1.1e-35 154.8 267 61.8
BcaC07g40246 Brassica carinata HOM05D007176 ORTHO05D009050 1.8e-35 154.1 268 47.0
Ciclev10012430m.g Citrus clementina HOM05D007176 ORTHO05D009050 2.4e-35 153.7 129 57.4
Gohir.D04G094700 Gossypium hirsutum HOM05D007176 ORTHO05D009050 2.7e-34 150.2 275 49.8
C08p33910 Brassica napus HOM05D007176 ORTHO05D009050 1.7e-33 147.5 186 59.1
VMungo0720G0788 Vigna mungo HOM05D007176 ORTHO05D009050 1.7e-33 147.5 111 60.4
DCAR_019856 Daucus carota HOM05D007176 ORTHO05D009050 3.9e-33 146.4 122 58.2
SGA_v2.0_scaffold274G46490 Striga asiatica HOM05D007176 ORTHO05D009050 1.2e-31 141.4 111 62.2
Lsat_1_v5_gn_9_26900 Lactuca sativa HOM05D007176 ORTHO05D009050 2.8e-31 140.2 123 59.3
Nn2g15783 Nelumbo nucifera HOM05D007176 ORTHO05D009050 4.0e-30 136.3 86 75.6
BolC8t50987H Brassica oleracea HOM05D000032 ORTHO05D001620 1.5e-29 134.4 256 44.9
Cfa020128 Carpinus fangiana HOM05D007176 ORTHO05D009050 1.5e-29 134.4 286 35.3
MBI01_g44281_MAGBIO Magnolia biondii HOM05D007176 ORTHO05D009050 4.4e-29 132.9 286 33.9
PSO675G7508 Papaver somniferum HOM05D007176 ORTHO05D009050 2.9e-28 130.2 234 52.1
QL07p025011 Quercus lobata HOM05D007176 ORTHO05D009050 2.9e-28 130.2 87 71.3
Manes.09G039600 Manihot esculenta HOM05D007176 ORTHO05D009050 1.1e-27 128.3 87 71.3
FvH4_6g21620 Fragaria vesca HOM05D007176 ORTHO05D009050 1.4e-27 127.9 275 44.4
Gorai.009G392400 Gossypium raimondii HOM05D007176 ORTHO05D009050 1.9e-27 127.5 289 44.3
AUR62032747 Chenopodium quinoa HOM05D007176 ORTHO05D009050 2.4e-27 127.1 85 70.6
FAN09G2372 Fragaria x ananassa HOM05D007176 ORTHO05D009050 4.1e-27 126.3 270 44.1
Phvul.007G261900 Phaseolus vulgaris HOM05D007176 ORTHO05D009050 4.1e-27 126.3 256 58.6
BraA09t40553Z Brassica rapa HOM05D000032 ORTHO05D001620 7.0e-27 125.6 97 57.7
FAN14G2546 Fragaria x ananassa HOM05D007176 ORTHO05D009050 7.0e-27 125.6 275 44.0
Hma1.2p1_0645F.1_g194890 Hydrangea macrophylla HOM05D007176 ORTHO05D009050 9.2e-27 125.2 87 70.1
Hma1.2p1_0645F.1_g194900 Hydrangea macrophylla HOM05D007176 ORTHO05D009050 9.2e-27 125.2 87 70.1
FAN02G0922 Fragaria x ananassa HOM05D007176 ORTHO05D009050 1.2e-26 124.8 275 44.0
ECA247G1245 Erigeron canadensis HOM05D007176 ORTHO05D009050 1.6e-26 124.4 87 71.3
PSO541G4948 Papaver somniferum HOM05D007176 ORTHO05D009050 1.6e-26 124.4 93 64.5
Ah.13g075580 Amaranthus hybridus HOM05D007176 ORTHO05D009050 2.0e-26 124.0 85 70.6
arahy.Tifrunner.gnm1.ann1.5B5G66 Arachis hypogaea HOM05D007176 ORTHO05D009050 2.0e-26 124.0 86 68.6
TPR.G19346 Trifolium pratense HOM05D007176 ORTHO05D009050 2.7e-26 123.6 85 68.2
TAR633G1141 Trochodendron aralioides HOM05D007176 ORTHO05D009050 3.5e-26 123.2 289 45.3
Ca_03573_v3 Cicer arietinum L. HOM05D007176 ORTHO05D009050 4.6e-26 122.9 87 65.5
Medtr1g054625 Medicago truncatula HOM05D007176 ORTHO05D009050 4.6e-26 122.9 87 66.7
TAR633G0683 Trochodendron aralioides HOM05D007176 ORTHO05D009050 4.6e-26 122.9 86 70.9
arahy.Tifrunner.gnm1.ann1.I5CDLA Arachis hypogaea HOM05D007176 ORTHO05D009050 6.0e-26 122.5 86 67.4
Lju124C23T17 Lonicera japonica HOM05D007176 ORTHO05D009050 6.0e-26 122.5 86 68.6
CSS0035640 Camellia sinensis var. sinensis HOM05D007176 ORTHO05D009050 1.0e-25 121.7 84 70.2
CSS0044198 Camellia sinensis var. sinensis HOM05D007176 ORTHO05D009050 1.0e-25 121.7 84 70.2
Lj5g0009846 Lotus japonicus HOM05D007176 ORTHO05D009050 1.0e-25 121.7 88 65.9
CiPaw.09G027300 Carya illinoinensis HOM05D007176 ORTHO05D009050 1.3e-25 121.3 289 45.0
Eucgr.K01865 Eucalyptus grandis HOM05D007176 ORTHO05D009050 1.3e-25 121.3 87 67.8
HanXRQChr10g0300591 Helianthus annuus HOM05D007176 ORTHO05D009050 1.3e-25 121.3 88 67.0
MD14G1051600 Malus domestica HOM05D007176 ORTHO05D009050 1.3e-25 121.3 275 45.5
PGSC0003DMG400029168 Solanum tuberosum HOM05D007176 ORTHO05D009050 1.3e-25 121.3 86 66.3
AL5G40300 Arabidopsis lyrata HOM05D007176 ORTHO05D009050 2.3e-25 120.6 88 63.6
Thhalv10006065m.g Eutrema salsugineum HOM05D007176 ORTHO05D009050 2.3e-25 120.6 87 63.2
FAN05G5781 Fragaria x ananassa HOM05D007176 ORTHO05D009050 3.0e-25 120.2 86 67.4
Psat6g088000 Pisum sativum HOM05D007176 ORTHO05D009050 3.0e-25 120.2 87 66.7
Haze_20048 Corylus avellana HOM05D007176 ORTHO05D009050 3.9e-25 119.8 261 45.2
Haze_20055 Corylus avellana HOM05D007176 ORTHO05D009050 3.9e-25 119.8 261 45.2
Rhsim04G0094400 Rhododendron simsii HOM05D007176 ORTHO05D009050 3.9e-25 119.8 86 66.3
Sc13g0002490 Simmondsia chinensis HOM05D007176 ORTHO05D009050 5.0e-25 119.4 87 64.4
Solyc06g005380.3 Solanum lycopersicum HOM05D007176 ORTHO05D009050 5.0e-25 119.4 86 65.1
EL10Ac3g06857 Beta vulgaris HOM05D007176 ORTHO05D009050 8.6e-25 118.6 83 68.7
Cc06_g15630 Coffea canephora HOM05D007176 ORTHO05D009050 8.6e-25 118.6 86 67.4
CAN.G111.5 Capsicum annuum HOM05D007176 ORTHO05D009050 1.1e-24 118.2 85 65.9
Carub.0005s2528 Capsella rubella HOM05D007176 ORTHO05D009050 1.5e-24 117.9 87 63.2
Lalb_Chr02g0153821 Lupinus albus HOM05D007176 ORTHO05D009050 1.9e-24 117.5 86 64.0
vmacro22113 Vaccinium macrocarpon HOM05D007176 ORTHO05D009050 1.9e-24 117.5 319 36.1
Peaxi162Scf00258g00925 Petunia axillaris HOM05D007176 ORTHO05D009050 2.5e-24 117.1 85 64.7
Glyma.09G105500 Glycine max HOM05D007176 ORTHO05D009050 5.6e-24 115.9 85 64.7
AT3G58530 Arabidopsis thaliana HOM05D007176 ORTHO05D009050 7.3e-24 115.5 88 62.5
Migut.K00028 Erythranthe guttata HOM05D007176 ORTHO05D009050 9.5e-24 115.2 86 64.0
HPP92_010126 Vanilla planifolia HOM05D007176 ORTHO05D009050 9.5e-24 115.2 86 62.8
SalBow1G6257 Salvia bowleyana HOM05D007176 ORTHO05D009050 4.7e-23 112.8 94 59.6
Os02g0281150 Oryza sativa ssp. japonica HOM05D007176 ORTHO05D009050 8.1e-23 112.1 93 54.8
Aqoxy279s002 Aquilegia oxysepala HOM05D007176 ORTHO05D009050 2.3e-22 110.5 85 63.5
Aqoxy2G00051 Aquilegia oxysepala HOM05D007176 ORTHO05D009050 2.3e-22 110.5 85 63.5
BcaC02g10014 Brassica carinata HOM05D007176 ORTHO05D009050 3.1e-22 110.2 85 60.0
Zm00001eb237210 Zea mays HOM05D007176 ORTHO05D009050 5.2e-22 109.4 88 61.4
CDE04G3485 Ceratophyllum demersum HOM05D007176 ORTHO05D009050 1.5e-21 107.8 85 60.0
Prupe.7G084400 Prunus persica HOM05D007176 ORTHO05D009050 5.8e-21 105.9 85 61.2
SEGI_09769 Sequoiadendron giganteum HOM05D007176 ORTHO05D009050 7.1e-19 99.0 71 63.4
C04p33960 Brassica napus HOM05D007176 ORTHO05D009050 7.8e-18 95.5 73 58.9
arahy.Tifrunner.gnm1.ann1.0S64XP Arachis hypogaea HOM05D007176 ORTHO05D009050 1.0e-17 95.1 83 55.4
Potri.006G195800 Populus trichocarpa HOM05D007176 ORTHO05D009050 1.3e-17 94.7 87 55.2
BolC4t24963H Brassica oleracea HOM05D000032 ORTHO05D001620 3.0e-17 93.6 73 57.5
Atru.chr8.1185 Acer truncatum HOM05D007176 ORTHO05D009050 8.6e-17 92.0 88 55.7
Cpa.g.sc85.35 Carica papaya HOM05D007176 ORTHO05D009050 3.3e-16 90.1 289 39.4
Atru.BG.213.p Acer truncatum HOM05D007176 ORTHO05D009050 5.6e-16 89.4 85 55.3
Nitab4.5_0008255g0020 Nicotiana tabacum HOM05D007176 ORTHO05D009050 4.7e-15 86.3 125 37.6
SMO118G0524 Selaginella moellendorffii HOM05D007176 ORTHO05D009050 8.1e-15 85.5 84 51.2
Pp3c23_2930 Physcomitrium patens HOM05D007176 ORTHO05D009050 1.5e-13 81.3 80 47.5
AagrBONN_evm.TU.Sc2ySwM_228.1251 Anthoceros agrestis HOM05D007176 ORTHO05D009050 2.0e-13 80.9 81 49.4
CANSAT64G0938 Cannabis sativa HOM05D007176 ORTHO05D009050 2.0e-13 80.9 288 35.8
Sabra06G0150500 Salix brachista HOM05D007176 ORTHO05D009050 4.4e-13 79.7 87 49.4
Nitab4.5_0000009g0020 Nicotiana tabacum HOM05D007176 ORTHO05D009050 7.6e-13 79.0 104 43.3
MD12G1053200 Malus domestica HOM05D007176 ORTHO05D009050 1.3e-12 78.2 88 48.9
Actinidia17284 Actinidia chinensis HOM05D007176 ORTHO05D009050 2.2e-12 77.4 86 45.3
unitig_736.g22301 Utricularia gibba HOM05D007176 ORTHO05D009050 2.9e-12 77.0 96 42.7
PGR142G3952 Punica granatum HOM05D007176 ORTHO05D009050 2.1e-10 70.9 87 44.8
PRCOL_00005880 Prasinoderma coloniale HOM05D007176 ORTHO05D009050 4.6e-10 69.7 99 36.4
A04p02540 Brassica napus HOM05D000032 ORTHO05D001620 1.1e-08 65.1 115 33.9
CANSAT35G0731 Cannabis sativa HOM05D002125 ORTHO05D002105 5.2e-06 56.2 86 31.4


User provided reference genes

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