Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0001G023 Amborella trichopoda HOM05D002549 ORTHO05D002755 2.7e-42 174.9 86 100.0
CsaV3_1G029830 Cucumis sativus L. HOM05D002549 ORTHO05D002755 1.3e-07 59.7 29 89.7
ClCG07G012770 Citrullus lanatus HOM05D002549 ORTHO05D002755 1.7e-07 59.3 33 81.8
Sed0016403 Sechium edule HOM05D002549 ORTHO05D002755 2.8e-07 58.5 33 78.8
MELO3C017897.2 Cucumis melo HOM05D002549 ORTHO05D002755 4.9e-07 57.8 31 83.9
CsaV3_4G001430 Cucumis sativus L. HOM05D002549 ORTHO05D002755 4.9e-07 57.8 31 83.9
Sed0026525 Sechium edule HOM05D002549 ORTHO05D002755 4.9e-07 57.8 33 78.8
BcaB01g04808 Brassica carinata HOM05D002549 ORTHO05D002755 1.4e-06 56.2 93 43.0
CSS0010325 Camellia sinensis var. sinensis HOM05D002549 ORTHO05D002755 1.4e-06 56.2 31 80.6
CSS0036416 Camellia sinensis var. sinensis HOM05D002549 ORTHO05D002755 1.4e-06 56.2 31 80.6
MELO3C026647.2 Cucumis melo HOM05D002549 ORTHO05D002755 1.4e-06 56.2 105 37.1
CsaV3_5G037750 Cucumis sativus L. HOM05D012605 ORTHO05D012259 1.4e-06 56.2 95 41.1
Ah.14g080260 Amaranthus hybridus HOM05D002549 ORTHO05D002755 1.8e-06 55.8 82 42.7
BcaB01g04804 Brassica carinata HOM05D002549 ORTHO05D002755 1.8e-06 55.8 91 42.9
BcaB01g04807 Brassica carinata HOM05D002549 ORTHO05D002755 1.8e-06 55.8 91 42.9
A03p09820 Brassica napus HOM05D002549 ORTHO05D002755 1.8e-06 55.8 91 42.9
C03p11400 Brassica napus HOM05D002549 ORTHO05D002755 1.8e-06 55.8 91 42.9
BolC3t13614H Brassica oleracea HOM05D002549 ORTHO05D002755 1.8e-06 55.8 91 42.9
BraA03t10297Z Brassica rapa HOM05D002549 ORTHO05D002755 1.8e-06 55.8 91 42.9
Carub.0006s1848 Capsella rubella HOM05D002549 ORTHO05D002755 2.4e-06 55.5 40 70.0
RcHm_v2.0_Chr2g0136461 Rosa chinensis HOM05D002549 ORTHO05D002755 2.4e-06 55.5 28 85.7
AT5G20100 Arabidopsis thaliana HOM05D002549 ORTHO05D002755 3.1e-06 55.1 57 57.9
CARHR192730 Cardamine hirsuta HOM05D002549 ORTHO05D002755 3.1e-06 55.1 29 86.2
Sc10g0007150 Simmondsia chinensis HOM05D002549 ORTHO05D002755 3.1e-06 55.1 27 88.9
Thecc.06G070600 Theobroma cacao HOM05D002549 ORTHO05D002755 3.1e-06 55.1 27 88.9
AUR62016372 Chenopodium quinoa HOM05D002030 ORTHO05D004391 4.1e-06 54.7 39 66.7
ClCG06G010950 Citrullus lanatus HOM05D002549 ORTHO05D002755 4.1e-06 54.7 102 36.3
Thhalv10015056m.g Eutrema salsugineum HOM05D002549 ORTHO05D002755 4.1e-06 54.7 93 44.1
Hma1.2p1_0665F.1_g199110 Hydrangea macrophylla HOM05D002549 ORTHO05D002755 4.1e-06 54.7 76 42.1
PGR031G0796 Punica granatum HOM05D002549 ORTHO05D002755 4.1e-06 54.7 27 88.9
Sed0003846 Sechium edule HOM05D002549 ORTHO05D002755 4.1e-06 54.7 32 71.9
Cpa.g.sc10.229 Carica papaya HOM05D002549 ORTHO05D002755 5.4e-06 54.3 27 85.2
Lsat_1_v5_gn_5_132361 Lactuca sativa HOM05D002549 ORTHO05D002755 5.4e-06 54.3 53 60.4
Nn8g39394 Nelumbo nucifera HOM05D002549 ORTHO05D002755 5.4e-06 54.3 27 85.2
AL6G31650 Arabidopsis lyrata HOM05D002549 ORTHO05D002755 7.0e-06 53.9 76 46.1
MSTRG.22728 Avicennia marina HOM05D002549 ORTHO05D002755 7.0e-06 53.9 27 85.2
THA.LOC104812501 Tarenaya hassleriana HOM05D002549 ORTHO05D002755 7.0e-06 53.9 31 74.2
TAR626G1731 Trochodendron aralioides HOM05D002549 ORTHO05D002755 7.0e-06 53.9 28 78.6
Aa31sc453G10 Aethionema arabicum HOM05D002549 ORTHO05D002755 9.2e-06 53.5 28 89.3
MSTRG.11120 Avicennia marina HOM05D002549 ORTHO05D002755 9.2e-06 53.5 27 85.2
Dinv30577 Davidia involucrata HOM05D002549 ORTHO05D002755 9.2e-06 53.5 27 85.2
Gohir.D07G038900 Gossypium hirsutum HOM05D002549 ORTHO05D002755 9.2e-06 53.5 75 42.7
Gorai.001G041000 Gossypium raimondii HOM05D002549 ORTHO05D002755 9.2e-06 53.5 75 42.7
Peaxi162Scf00641g00003 Petunia axillaris HOM05D002549 ORTHO05D002755 9.2e-06 53.5 80 41.2
Sp6g24310 Schrenkiella parvula HOM05D002549 ORTHO05D002755 9.2e-06 53.5 92 42.4


User provided reference genes

Program Settings