Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATMG01130 Arabidopsis thaliana HOM05D002965 ORTHO05D011068 4.9e-49 197.6 107 100.0
Cpa.g.sc263.24 Carica papaya HOM05D002965 ORTHO05D011068 4.8e-28 127.9 112 69.6
Cfa022987 Carpinus fangiana HOM05D002965 ORTHO05D010183 1.7e-25 119.4 107 71.0
Thhalv10022991m.g Eutrema salsugineum HOM05D016050 ORTHO05D011068 6.4e-25 117.5 64 92.2
PGSC0003DMG400017419 Solanum tuberosum HOM05D002965 ORTHO05D011068 7.9e-23 110.5 73 82.2
Nitab4.5_0001761g0080 Nicotiana tabacum HOM05D002965 ORTHO05D010183 5.1e-22 107.8 70 82.9
Nitab4.5_0005831g0070 Nicotiana tabacum HOM05D002965 ORTHO05D010183 8.7e-22 107.1 88 73.9
Eucgr.C02171 Eucalyptus grandis HOM05D002965 ORTHO05D011068 1.5e-21 106.3 88 72.7
CSS0045201 Camellia sinensis var. sinensis HOM05D002965 ORTHO05D011068 1.6e-20 102.8 98 66.3
Nitab4.5_0002653g0030 Nicotiana tabacum HOM05D002965 ORTHO05D011068 4.8e-12 74.7 48 83.3
Solyc04g051275.1 Solanum lycopersicum HOM05D002965 ORTHO05D011068 5.3e-11 71.2 61 67.2
Sed0028066 Sechium edule HOM05D002965 ORTHO05D010183 9.0e-11 70.5 56 73.2
BNapus_Darmor_BZH_scaffold_234p00010 Brassica napus HOM05D016050 ORTHO05D011068 6.0e-07 57.8 30 90.0
BolSC28t60381H Brassica oleracea HOM05D016050 ORTHO05D011068 6.0e-07 57.8 30 90.0
BraSC224t45813Z Brassica rapa HOM05D016050 ORTHO05D011068 6.0e-07 57.8 30 90.0
BraSC77t46623Z Brassica rapa HOM05D016050 ORTHO05D011068 6.0e-07 57.8 30 90.0
MELO3C023755.2 Cucumis melo HOM05D066561 ORTHO05D011068 6.0e-07 57.8 68 54.4
Nitab4.5_0000172g1470 Nicotiana tabacum HOM05D002965 ORTHO05D010183 7.9e-07 57.4 68 55.9
Aa31csc822G20 Aethionema arabicum HOM05D002965 ORTHO05D011068 1.0e-06 57.0 30 90.0
Aa31csc822G10 Aethionema arabicum HOM05D002660 ORTHO05D013121 1.3e-06 56.6 31 90.3
Haze_01424 Corylus avellana HOM05D022652 ORTHO05D011068 2.3e-06 55.8 48 70.8
Haze_01425 Corylus avellana HOM05D022652 ORTHO05D011068 2.3e-06 55.8 48 70.8


User provided reference genes

Program Settings