Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATMG01020 Arabidopsis thaliana HOM05D002965 ORTHO05D011945 6.5e-71 270.8 154 100.0
AT2G07674 Arabidopsis thaliana HOM05D002965 ORTHO05D010536 2.8e-66 255.4 152 96.1
CARHR283030 Cardamine hirsuta HOM05D002965 ORTHO05D011945 1.0e-31 140.6 161 54.0
BolSC28t60357H Brassica oleracea HOM05D002965 ORTHO05D010536 1.7e-31 139.8 154 55.2
CARHR283270 Cardamine hirsuta HOM05D002965 ORTHO05D011945 4.3e-30 135.2 162 55.6
BraSC48t46254Z Brassica rapa HOM05D002965 ORTHO05D010536 2.8e-29 132.5 148 54.1
BNapus_Darmor_BZH_scaffold_234p00050 Brassica napus HOM05D002965 ORTHO05D010536 8.1e-29 131.0 148 53.4
BraSC159t45718Z Brassica rapa HOM05D002965 ORTHO05D011945 4.0e-28 128.6 149 53.0
ATMG00670 Arabidopsis thaliana HOM05D002965 ORTHO05D011945 2.4e-25 119.4 159 50.9
AL3G44420 Arabidopsis lyrata HOM05D002965 ORTHO05D010536 1.0e-23 114.0 79 77.2
Thhalv10022998m.g Eutrema salsugineum HOM05D002965 ORTHO05D011945 5.1e-23 111.7 146 49.3
BolC1t03449H Brassica oleracea HOM05D010793 ORTHO05D011945 6.6e-23 111.3 131 54.2
BraSC177t45755Z Brassica rapa HOM05D010793 ORTHO05D011945 5.6e-22 108.2 101 64.4
BraSC48t46343Z Brassica rapa HOM05D010793 ORTHO05D011945 5.6e-22 108.2 101 64.4
BcaC08g43717 Brassica carinata HOM05D010793 ORTHO05D011945 1.8e-20 103.2 101 62.4
BolSC28t60431H Brassica oleracea HOM05D010793 ORTHO05D011945 3.1e-20 102.4 95 64.2
BcaB06g27867 Brassica carinata HOM05D010793 ORTHO05D011945 2.7e-16 89.4 101 59.4
Aa31csc464G90 Aethionema arabicum HOM05D002965 ORTHO05D011945 7.9e-16 87.8 136 45.6
BcaC05g26886 Brassica carinata HOM05D002965 ORTHO05D011945 2.5e-14 82.8 112 50.9
BolSC28t60327H Brassica oleracea HOM05D010793 ORTHO05D011945 3.1e-12 75.9 101 52.5
Thhalv10023135m.g Eutrema salsugineum HOM05D002965 ORTHO05D010536 2.9e-10 69.3 92 45.7
BcaC09g49585 Brassica carinata HOM05D008814 ORTHO05D010812 4.2e-09 65.5 90 48.9
ATMG00040 Arabidopsis thaliana HOM05D010793 ORTHO05D011945 9.3e-09 64.3 130 41.5
CARHR282610 Cardamine hirsuta HOM05D010793 ORTHO05D011945 9.3e-09 64.3 130 41.5
Aa31csc1081G50 Aethionema arabicum HOM05D002965 ORTHO05D017245 3.3e-06 55.8 95 38.9
C01p34830 Brassica napus HOM05D006320 ORTHO05D007069 9.6e-06 54.3 88 45.5


User provided reference genes

Program Settings