Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATCG00630 Arabidopsis thaliana HOM05D008505 ORTHO05D010735 1.6e-17 91.7 45 100.0
CARHR282140 Cardamine hirsuta HOM05D008505 ORTHO05D010735 2.1e-17 91.3 44 100.0
PGR111G0077 Punica granatum HOM05D008505 ORTHO05D010735 3.5e-17 90.5 45 97.8
CAN.G2018.8 Capsicum annuum HOM05D008505 ORTHO05D010735 1.0e-16 89.0 45 95.6
CAN.G3365.2 Capsicum annuum HOM05D008505 ORTHO05D010735 1.0e-16 89.0 45 95.6
CAN.G35999.1 Capsicum annuum HOM05D008505 ORTHO05D010735 1.0e-16 89.0 45 95.6
CAN.G89.2 Capsicum annuum HOM05D008505 ORTHO05D010735 1.0e-16 89.0 45 95.6
Migut.D01431 Erythranthe guttata HOM05D008505 ORTHO05D010735 1.0e-16 89.0 45 95.6
PSO548G0021 Papaver somniferum HOM05D008505 ORTHO05D010735 1.0e-16 89.0 45 95.6
Solyc09g064400.2 Solanum lycopersicum HOM05D008505 ORTHO05D010735 1.3e-16 88.6 44 95.5
CAN.G452.6 Capsicum annuum HOM05D008505 ORTHO05D010735 5.1e-16 86.7 45 93.3
Solyc01g067760.1 Solanum lycopersicum HOM05D008505 ORTHO05D010735 5.1e-16 86.7 43 95.3
Gorai.009G128900 Gossypium raimondii HOM05D008505 ORTHO05D010735 6.7e-16 86.3 43 93.0
C04p42980 Brassica napus HOM05D008505 ORTHO05D010735 8.7e-16 85.9 45 93.3
BolC4t25868H Brassica oleracea HOM05D008505 ORTHO05D010735 8.7e-16 85.9 45 93.3
DCAR_032504 Daucus carota HOM05D008505 ORTHO05D010735 8.7e-16 85.9 42 97.6
CAN.G1595.9 Capsicum annuum HOM05D008505 ORTHO05D010735 1.1e-15 85.5 45 91.1
Glyma.12G232400 Glycine max HOM05D008505 ORTHO05D010735 1.1e-15 85.5 45 91.1
Glyma.15G126100 Glycine max HOM05D008505 ORTHO05D010735 1.1e-15 85.5 45 91.1
Phvul.009G188366 Phaseolus vulgaris HOM05D008505 ORTHO05D010735 1.1e-15 85.5 45 91.1
Phvul.002G090522 Phaseolus vulgaris HOM05D008505 ORTHO05D010735 1.5e-15 85.1 44 90.9
LjContig00318g0023250 Lotus japonicus HOM05D008505 ORTHO05D010735 1.9e-15 84.7 45 91.1
A06p23140 Brassica napus HOM05D008505 ORTHO05D010735 3.3e-15 84.0 42 97.6
C02p43560 Brassica napus HOM05D008505 ORTHO05D010735 3.3e-15 84.0 42 97.6
C06p22980 Brassica napus HOM05D008505 ORTHO05D010735 3.3e-15 84.0 42 97.6
BolC9t53162H Brassica oleracea HOM05D008505 ORTHO05D010735 3.3e-15 84.0 42 97.6
BolSC29t60474H Brassica oleracea HOM05D008505 ORTHO05D010735 3.3e-15 84.0 42 97.6
BolSC29t60595H Brassica oleracea HOM05D008505 ORTHO05D010735 3.3e-15 84.0 42 97.6
BolSC35t60655H Brassica oleracea HOM05D008505 ORTHO05D010735 3.3e-15 84.0 42 97.6
BolSC47t61089H Brassica oleracea HOM05D008505 ORTHO05D010735 3.3e-15 84.0 42 97.6
BraA06t25417Z Brassica rapa HOM05D008505 ORTHO05D010735 3.3e-15 84.0 42 97.6
BraSC138t45568Z Brassica rapa HOM05D008505 ORTHO05D010735 3.3e-15 84.0 42 97.6
BraSC25t45858Z Brassica rapa HOM05D008505 ORTHO05D010735 3.3e-15 84.0 42 97.6
BraSC58t46429Z Brassica rapa HOM05D008505 ORTHO05D010735 3.3e-15 84.0 42 97.6
CAN.G1739.9 Capsicum annuum HOM05D008505 ORTHO05D010735 4.3e-15 83.6 45 88.9
Gohir.A12G229532 Gossypium hirsutum HOM05D008505 ORTHO05D010735 7.4e-15 82.8 42 95.2
BolC2t08913H Brassica oleracea HOM05D008505 ORTHO05D010735 1.3e-14 82.0 43 93.0
Gorai.005G108800 Gossypium raimondii HOM05D008505 ORTHO05D010735 1.3e-14 82.0 43 88.4
arahy.Tifrunner.gnm1.ann1.DJ5Q02 Arachis hypogaea HOM05D008505 ORTHO05D010735 2.1e-14 81.3 42 90.5
Gohir.D12G108100 Gossypium hirsutum HOM05D008505 ORTHO05D010735 6.2e-14 79.7 42 92.9
Nitab4.5_0011882g0050 Nicotiana tabacum HOM05D008505 ORTHO05D010735 6.2e-14 79.7 42 88.1
BraSC103t45457Z Brassica rapa HOM05D008505 ORTHO05D010735 3.1e-13 77.4 41 92.7
BraSC103t45474Z Brassica rapa HOM05D008505 ORTHO05D010735 3.1e-13 77.4 42 92.9
CiPaw.11G114400 Carya illinoinensis HOM05D008505 ORTHO05D010735 4.5e-12 73.6 42 85.7
Gorai.007G307300 Gossypium raimondii HOM05D008505 ORTHO05D010735 7.6e-12 72.8 42 85.7
Potri.003G067501 Populus trichocarpa HOM05D008505 ORTHO05D010735 1.0e-11 72.4 42 81.0
Gohir.D06G113625 Gossypium hirsutum HOM05D008505 ORTHO05D010735 2.2e-11 71.2 41 85.4
Gorai.010G129600 Gossypium raimondii HOM05D007549 ORTHO05D009532 2.9e-11 70.9 38 86.8
Medtr8g045210 Medicago truncatula HOM05D007549 ORTHO05D009532 4.2e-10 67.0 35 91.4
BolSC35t60742H Brassica oleracea HOM05D008505 ORTHO05D010735 7.9e-09 62.8 31 96.8
Hund19833 Selenicereus undatus HOM05D008505 ORTHO05D010735 8.7e-08 59.3 37 78.4
ClCG00G001570 Citrullus lanatus HOM05D000540 ORTHO05D008899 2.5e-07 57.8 35 74.3
Nn3g18711 Nelumbo nucifera HOM05D008505 ORTHO05D010735 3.3e-07 57.4 28 96.4


User provided reference genes

Program Settings