Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL2G21540 Arabidopsis lyrata HOM05D008601 ORTHO05D010814 1.0e-12 75.5 38 100.0
ATCG00510 Arabidopsis thaliana HOM05D008601 ORTHO05D010814 1.0e-12 75.5 38 100.0
C09p29590 Brassica napus HOM05D008601 ORTHO05D010814 1.7e-12 74.7 38 97.4
BolSC29t60466H Brassica oleracea HOM05D008601 ORTHO05D010814 1.7e-12 74.7 38 97.4
BolSC29t60588H Brassica oleracea HOM05D008601 ORTHO05D010814 1.7e-12 74.7 38 97.4
BolSC35t60751H Brassica oleracea HOM05D008601 ORTHO05D010814 1.7e-12 74.7 38 97.4
BolSC47t61098H Brassica oleracea HOM05D008601 ORTHO05D010814 1.7e-12 74.7 38 97.4
BraSC25t45847Z Brassica rapa HOM05D008601 ORTHO05D010814 1.7e-12 74.7 38 97.4
BraSC25t45867Z Brassica rapa HOM05D008601 ORTHO05D010814 1.7e-12 74.7 38 97.4
BraSC58t46421Z Brassica rapa HOM05D008601 ORTHO05D010814 1.7e-12 74.7 38 97.4
BraSC59t46592Z Brassica rapa HOM05D008601 ORTHO05D010814 1.7e-12 74.7 38 97.4
BolSC35t60645H Brassica oleracea HOM05D008601 ORTHO05D010814 2.2e-12 74.3 37 97.3
BolC9t55820H Brassica oleracea HOM05D008601 ORTHO05D010814 1.4e-11 71.6 37 94.6
BolC9t58297H Brassica oleracea HOM05D008601 ORTHO05D010814 1.9e-11 71.2 38 94.7
C09p54220 Brassica napus HOM05D008601 ORTHO05D010814 5.5e-11 69.7 38 92.1
C09p54260 Brassica napus HOM05D008601 ORTHO05D010814 5.5e-11 69.7 38 92.1
BolSC49t61184H Brassica oleracea HOM05D008601 ORTHO05D010814 7.1e-11 69.3 37 91.9
BolSC46t60999H Brassica oleracea HOM05D008601 ORTHO05D010814 1.6e-10 68.2 37 89.2
BolSC46t61036H Brassica oleracea HOM05D008601 ORTHO05D010814 1.6e-10 68.2 37 89.2
Potri.013G162500 Populus trichocarpa HOM05D008601 ORTHO05D010814 2.7e-10 67.4 38 89.5
A06p23210 Brassica napus HOM05D008601 ORTHO05D010814 7.9e-10 65.9 33 97.0
C09p54280 Brassica napus HOM05D008601 ORTHO05D010814 1.8e-09 64.7 37 86.5
BolSC45t60952H Brassica oleracea HOM05D008601 ORTHO05D010814 2.3e-09 64.3 33 93.9
PSO548G0030 Papaver somniferum HOM05D008601 ORTHO05D010814 3.9e-09 63.5 36 91.7
PGR111G0070 Punica granatum HOM05D008601 ORTHO05D010814 8.7e-09 62.4 31 96.8
GSVIVG01030618001 Vitis vinifera HOM05D008601 ORTHO05D010814 8.7e-09 62.4 33 93.9
Gohir.1Z050366 Gossypium hirsutum HOM05D008601 ORTHO05D010814 1.1e-08 62.0 38 81.6
Gohir.A07G163663 Gossypium hirsutum HOM05D008601 ORTHO05D010814 1.1e-08 62.0 38 81.6
Lalb_Chr22g0360781 Lupinus albus HOM05D008601 ORTHO05D010814 1.1e-08 62.0 32 93.8
BraA10t43927Z Brassica rapa HOM05D008601 ORTHO05D010814 1.9e-08 61.2 36 88.9
Glyma.15G003800 Glycine max HOM05D008601 ORTHO05D010814 1.9e-08 61.2 33 87.9
Nn3g19077 Nelumbo nucifera HOM05D008601 ORTHO05D010814 1.9e-08 61.2 36 86.1
Gorai.004G112900 Gossypium raimondii HOM05D008601 ORTHO05D010814 3.3e-08 60.5 37 78.4
CAN.G1569.13 Capsicum annuum HOM05D008601 ORTHO05D010814 4.3e-08 60.1 31 93.5
Solyc07g024040.2 Solanum lycopersicum HOM05D008601 ORTHO05D010814 7.4e-08 59.3 31 93.5
Glyma.10G208900 Glycine max HOM05D008601 ORTHO05D010814 1.3e-07 58.5 33 84.8
Potri.016G094033 Populus trichocarpa HOM05D008601 ORTHO05D010814 1.6e-07 58.2 37 78.4
Nitab4.5_0001170g0140 Nicotiana tabacum HOM05D008601 ORTHO05D010814 2.1e-07 57.8 31 90.3
CAN.G212.8 Capsicum annuum HOM05D008601 ORTHO05D010814 2.8e-07 57.4 31 87.1
Gorai.004G118500 Gossypium raimondii HOM05D008601 ORTHO05D010814 6.2e-07 56.2 38 76.3
Gorai.012G112500 Gossypium raimondii HOM05D008601 ORTHO05D010814 8.2e-07 55.8 38 73.7
Glyma.17G173700 Glycine max HOM05D008601 ORTHO05D010814 1.1e-06 55.5 33 84.8
DCAR_032494 Daucus carota HOM05D008601 ORTHO05D010814 2.4e-06 54.3 35 74.3
Gohir.D06G120350 Gossypium hirsutum HOM05D008601 ORTHO05D010814 4.0e-06 53.5 33 81.8
Nn010s41434 Nelumbo nucifera HOM05D036057 ORTHO05D276243 6.9e-06 52.8 33 87.9
Nn010s41445 Nelumbo nucifera HOM05D036057 ORTHO05D276088 6.9e-06 52.8 33 87.9
Nn265s45954 Nelumbo nucifera HOM05D036057 ORTHO05D277393 6.9e-06 52.8 33 87.9


User provided reference genes

Program Settings