Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATCG00065 Arabidopsis thaliana HOM05D008747 ORTHO05D010943 1.8e-14 81.3 38 100.0
BNapus_Darmor_BZH_scaffold_287p00210 Brassica napus HOM05D008747 ORTHO05D010943 1.8e-14 81.3 38 100.0
C06p22940 Brassica napus HOM05D008747 ORTHO05D010943 1.8e-14 81.3 38 100.0
C06p23050 Brassica napus HOM05D008747 ORTHO05D010943 1.8e-14 81.3 38 100.0
BolSC29t60478H Brassica oleracea HOM05D008747 ORTHO05D010943 1.8e-14 81.3 38 100.0
BolSC29t60599H Brassica oleracea HOM05D008747 ORTHO05D010943 1.8e-14 81.3 38 100.0
BolSC35t60658H Brassica oleracea HOM05D008747 ORTHO05D010943 1.8e-14 81.3 38 100.0
BolSC35t60740H Brassica oleracea HOM05D008747 ORTHO05D010943 1.8e-14 81.3 38 100.0
BolSC46t61009H Brassica oleracea HOM05D008747 ORTHO05D010943 1.8e-14 81.3 38 100.0
BolSC46t61026H Brassica oleracea HOM05D008747 ORTHO05D010943 1.8e-14 81.3 38 100.0
BolSC47t61085H Brassica oleracea HOM05D008747 ORTHO05D010943 1.8e-14 81.3 38 100.0
BraSC103t45476Z Brassica rapa HOM05D008747 ORTHO05D010943 1.8e-14 81.3 38 100.0
BraSC138t45564Z Brassica rapa HOM05D008747 ORTHO05D010943 1.8e-14 81.3 38 100.0
BraSC25t45854Z Brassica rapa HOM05D008747 ORTHO05D010943 1.8e-14 81.3 38 100.0
BraSC58t46433Z Brassica rapa HOM05D008747 ORTHO05D010943 1.8e-14 81.3 38 100.0
Lalb_Chr07g0192051 Lupinus albus HOM05D008747 ORTHO05D010943 4.0e-14 80.1 38 97.4
Glyma.14G213500 Glycine max HOM05D008747 ORTHO05D010943 1.2e-13 78.6 38 94.7
Solyc00g500069.1 Solanum lycopersicum HOM05D008747 ORTHO05D010943 1.2e-13 78.6 37 100.0
C02p28710 Brassica napus HOM05D008747 ORTHO05D010943 3.4e-13 77.0 38 94.7
Gohir.A12G229300 Gossypium hirsutum HOM05D008747 ORTHO05D010943 4.5e-13 76.6 38 94.7
Gohir.D01G102008 Gossypium hirsutum HOM05D008747 ORTHO05D010943 4.5e-13 76.6 38 94.7
Gohir.D12G107700 Gossypium hirsutum HOM05D008747 ORTHO05D010943 4.5e-13 76.6 38 94.7
arahy.Tifrunner.gnm1.ann1.2D3TTC Arachis hypogaea HOM05D008747 ORTHO05D010943 1.0e-12 75.5 36 97.2
arahy.Tifrunner.gnm1.ann1.HJLG3A Arachis hypogaea HOM05D008747 ORTHO05D010943 1.0e-12 75.5 36 97.2
Gohir.D07G175050 Gossypium hirsutum HOM05D008747 ORTHO05D010943 1.0e-12 75.5 38 92.1
Phvul.002G090400 Phaseolus vulgaris HOM05D008747 ORTHO05D010943 1.0e-12 75.5 38 92.1
Gohir.A03G081900 Gossypium hirsutum HOM05D008747 ORTHO05D010943 1.7e-12 74.7 38 92.1
Gohir.A06G008400 Gossypium hirsutum HOM05D008747 ORTHO05D010943 1.7e-12 74.7 38 92.1
arahy.Tifrunner.gnm1.ann1.97L4DF Arachis hypogaea HOM05D008747 ORTHO05D010943 2.9e-12 73.9 35 97.1
Gohir.D07G185800 Gossypium hirsutum HOM05D008747 ORTHO05D010943 6.5e-12 72.8 38 86.8
arahy.Tifrunner.gnm1.ann1.VB0WZA Arachis hypogaea HOM05D008747 ORTHO05D010943 8.4e-12 72.4 36 94.4
BraSC58t46494Z Brassica rapa HOM05D008747 ORTHO05D010943 1.4e-11 71.6 41 92.7
Gohir.D06G104700 Gossypium hirsutum HOM05D008747 ORTHO05D010943 1.4e-11 71.6 38 89.5
C04p42960 Brassica napus HOM05D008747 ORTHO05D010943 1.9e-11 71.2 38 86.8
Solyc00g500254.1 Solanum lycopersicum HOM05D007792 ORTHO05D010943 3.2e-11 70.5 37 89.2
SGA_v2.0_scaffold479G52248 Striga asiatica HOM05D007792 ORTHO05D009931 3.2e-11 70.5 37 89.2
Gohir.D06G113700 Gossypium hirsutum HOM05D008747 ORTHO05D010943 7.1e-11 69.3 38 86.8
Gohir.D06G125250 Gossypium hirsutum HOM05D008747 ORTHO05D010943 1.2e-10 68.6 38 84.2
Potri.001G305350 Populus trichocarpa HOM05D008747 ORTHO05D010943 1.2e-10 68.6 38 86.8
Gohir.D01G169000 Gossypium hirsutum HOM05D008747 ORTHO05D010943 1.6e-10 68.2 38 86.8
Gohir.D01G169110 Gossypium hirsutum HOM05D008747 ORTHO05D010943 7.9e-10 65.9 38 81.6
Gorai.012G094800 Gossypium raimondii HOM05D007792 ORTHO05D009931 2.8e-07 57.4 34 76.5
Peaxi162Scf01751g00007 Petunia axillaris HOM05D008747 ORTHO05D010943 2.8e-07 57.4 27 100.0
Gohir.D04G084960 Gossypium hirsutum HOM05D007792 ORTHO05D009931 1.4e-06 55.1 34 73.5


User provided reference genes

Program Settings