Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT5G66810 Arabidopsis thaliana HOM05D005929 ORTHO05D007869 0.0e+00 1161.4 592 100.0
AL8G44640 Arabidopsis lyrata HOM05D005929 ORTHO05D007869 3.6e-258 894.8 489 94.3
Carub.0008s2770 Capsella rubella HOM05D005929 ORTHO05D007869 2.7e-234 815.5 485 89.1
Thhalv10003742m.g Eutrema salsugineum HOM05D005929 ORTHO05D007869 8.2e-231 803.9 488 85.2
Sp2g29870 Schrenkiella parvula HOM05D005929 ORTHO05D007869 5.3e-230 801.2 489 85.3
BraA07t29438Z Brassica rapa HOM05D005929 ORTHO05D007869 7.0e-222 774.2 524 79.2
A07p17110 Brassica napus HOM05D005929 ORTHO05D007869 8.0e-218 760.8 487 81.9
C07p24970 Brassica napus HOM05D005929 ORTHO05D007869 2.3e-217 759.2 488 81.6
BcaC06g34750 Brassica carinata HOM05D005929 ORTHO05D007869 3.4e-216 755.4 488 81.1
BcaB02g09988 Brassica carinata HOM05D005929 ORTHO05D007869 9.2e-214 747.3 489 81.6
BolC7t43027H Brassica oleracea HOM05D005929 ORTHO05D007869 2.3e-212 742.7 512 77.3
Aa31LG1G15360 Aethionema arabicum HOM05D005929 ORTHO05D007869 1.1e-206 723.8 534 75.8
THA.LOC104821272 Tarenaya hassleriana HOM05D005929 ORTHO05D007869 4.3e-195 685.3 501 74.9
CARHR280890 Cardamine hirsuta HOM05D005929 ORTHO05D007869 1.3e-172 610.5 354 88.1
Atru.chr3.351 Acer truncatum HOM05D005929 ORTHO05D007869 9.6e-171 604.4 524 64.5
COL.COLO4_11392 Corchorus olitorius HOM05D005929 ORTHO05D007869 1.1e-163 580.9 523 63.3
Manes.12G099700 Manihot esculenta HOM05D005929 ORTHO05D007869 2.5e-163 579.7 519 62.2
Ciclev10025029m.g Citrus clementina HOM05D005929 ORTHO05D007869 3.3e-163 579.3 507 63.5
Thecc.01G053700 Theobroma cacao HOM05D005929 ORTHO05D007869 5.6e-163 578.6 529 62.4
Cfa004003 Carpinus fangiana HOM05D005929 ORTHO05D007869 2.8e-162 576.2 526 63.5
Duzib147G0952 Durio zibethinus HOM05D005929 ORTHO05D007869 9.0e-161 571.2 523 60.6
Dinv39868 Davidia involucrata HOM05D005929 ORTHO05D007869 2.6e-160 569.7 506 63.6
ClCG01G016760 Citrullus lanatus HOM05D005929 ORTHO05D007869 1.0e-159 567.8 511 61.1
CsaV3_6G043190 Cucumis sativus L. HOM05D005929 ORTHO05D007869 1.3e-159 567.4 507 61.5
MD00G1045200 Malus domestica HOM05D005929 ORTHO05D007869 4.9e-159 565.5 525 60.6
GSVIVG01022148001 Vitis vinifera HOM05D005929 ORTHO05D007869 4.9e-159 565.5 516 61.2
Potri.005G137100 Populus trichocarpa HOM05D005929 ORTHO05D007869 1.1e-158 564.3 511 59.5
CSS0000081 Camellia sinensis var. sinensis HOM05D005929 ORTHO05D007869 3.2e-158 562.8 523 60.4
Gorai.007G211400 Gossypium raimondii HOM05D005929 ORTHO05D007869 4.2e-158 562.4 530 59.6
MELO3C007555.2 Cucumis melo HOM05D005929 ORTHO05D007869 7.1e-158 561.6 513 61.0
TPR.G19031 Trifolium pratense HOM05D005929 ORTHO05D007869 9.3e-158 561.2 515 59.2
Prupe.7G135500 Prunus persica HOM05D005929 ORTHO05D007869 1.3e-156 557.4 521 60.5
Gohir.D03G021300 Gossypium hirsutum HOM05D005929 ORTHO05D007869 1.8e-156 557.0 503 62.0
RcHm_v2.0_Chr2g0105071 Rosa chinensis HOM05D005929 ORTHO05D007869 5.1e-156 555.4 521 61.0
Actinidia16503 Actinidia chinensis HOM05D005929 ORTHO05D007869 4.3e-155 552.4 532 58.6
Gorai.003G022900 Gossypium raimondii HOM05D005929 ORTHO05D007869 7.4e-155 551.6 510 61.2
FAN28G0152 Fragaria x ananassa HOM05D005929 ORTHO05D007869 9.6e-155 551.2 520 59.8
Sabra05G0109600 Salix brachista HOM05D005929 ORTHO05D007869 9.6e-155 551.2 511 59.9
Cc07_g05890 Coffea canephora HOM05D005929 ORTHO05D007869 1.3e-154 550.8 507 59.8
VMungo0251G2155 Vigna mungo HOM05D005929 ORTHO05D007869 1.3e-154 550.8 516 57.9
Gohir.A02G159200 Gossypium hirsutum HOM05D005929 ORTHO05D007869 1.6e-154 550.4 510 61.4
MD02G1169700 Malus domestica HOM05D005929 ORTHO05D007869 4.8e-154 548.9 524 59.9
FAN23G0057 Fragaria x ananassa HOM05D005929 ORTHO05D007869 1.1e-153 547.7 520 59.0
TAR628G1297 Trochodendron aralioides HOM05D005929 ORTHO05D007869 1.4e-153 547.4 525 57.9
CANSAT56G1082 Cannabis sativa HOM05D005929 ORTHO05D007869 1.8e-153 547.0 523 58.9
CiPaw.01G019600 Carya illinoinensis HOM05D005929 ORTHO05D007869 2.4e-153 546.6 523 61.6
FAN26G1042 Fragaria x ananassa HOM05D005929 ORTHO05D007869 2.4e-153 546.6 520 59.4
Psat4g087280 Pisum sativum HOM05D005929 ORTHO05D007869 3.1e-153 546.2 525 57.0
TWI09G0459 Tripterygium wilfordii HOM05D005929 ORTHO05D007869 3.1e-153 546.2 515 59.2
Lj4g0006502 Lotus japonicus HOM05D005929 ORTHO05D007869 4.0e-153 545.8 507 60.0
FvH4_1g15790 Fragaria vesca HOM05D005929 ORTHO05D007869 5.3e-153 545.4 520 60.0
Phvul.003G244900 Phaseolus vulgaris HOM05D005929 ORTHO05D007869 9.0e-153 544.7 515 57.7
Ca_21176_v3 Cicer arietinum L. HOM05D005929 ORTHO05D007869 1.2e-152 544.3 515 58.4
FAN19G1416 Fragaria x ananassa HOM05D005929 ORTHO05D007869 1.2e-152 544.3 520 59.8
TWI53G1997 Tripterygium wilfordii HOM05D005929 ORTHO05D007869 2.6e-152 543.1 515 57.5
Glyma.17G175900 Glycine max HOM05D005929 ORTHO05D007869 3.4e-152 542.7 515 58.8
Lalb_Chr05g0226621 Lupinus albus HOM05D005929 ORTHO05D007869 4.5e-152 542.3 515 57.5
CiPaw.02G008900 Carya illinoinensis HOM05D005929 ORTHO05D007869 7.6e-152 541.6 513 59.8
MBI06_g04503_MAGBIO Magnolia biondii HOM05D005929 ORTHO05D007869 7.6e-152 541.6 538 58.2
Glyma.05G084300 Glycine max HOM05D005929 ORTHO05D007869 1.0e-151 541.2 515 57.7
PGR102G2065 Punica granatum HOM05D005929 ORTHO05D007869 1.1e-150 537.7 525 57.3
Hma1.2p1_0200F.1_g086000 Hydrangea macrophylla HOM05D005929 ORTHO05D007869 1.9e-150 537.0 510 60.8
Gohir.A11G190800 Gossypium hirsutum HOM05D005929 ORTHO05D007869 3.2e-150 536.2 526 58.6
Sed0025648 Sechium edule HOM05D005929 ORTHO05D007869 5.5e-150 535.4 522 56.5
Nn1g05837 Nelumbo nucifera HOM05D005929 ORTHO05D007869 3.3e-147 526.2 531 57.6
Rhsim08G0101600 Rhododendron simsii HOM05D005929 ORTHO05D007869 5.7e-147 525.4 551 55.7
arahy.Tifrunner.gnm1.ann1.UKY0C7 Arachis hypogaea HOM05D005929 ORTHO05D007869 9.7e-147 524.6 518 57.5
Gohir.D11G197600 Gossypium hirsutum HOM05D005929 ORTHO05D007869 3.7e-146 522.7 526 58.0
Hund13561 Selenicereus undatus HOM05D005929 ORTHO05D007869 3.7e-146 522.7 511 59.3
DCAR_010904 Daucus carota HOM05D005929 ORTHO05D007869 1.4e-145 520.8 517 58.8
Migut.H00446 Erythranthe guttata HOM05D005929 ORTHO05D007869 4.1e-145 519.2 509 57.0
PSO170G4100 Papaver somniferum HOM05D005929 ORTHO05D007869 5.0e-143 512.3 525 55.2
EL10Ac6g15157 Beta vulgaris HOM05D005929 ORTHO05D007869 8.5e-143 511.5 515 57.7
vmacro17944 Vaccinium macrocarpon HOM05D005929 ORTHO05D007869 8.5e-143 511.5 607 51.4
PSO210G3061 Papaver somniferum HOM05D005929 ORTHO05D007869 2.7e-141 506.5 525 54.7
SGA_v2.0_scaffold15G07274 Striga asiatica HOM05D005929 ORTHO05D007869 2.7e-141 506.5 527 54.8
Sc03g0001480 Simmondsia chinensis HOM05D005929 ORTHO05D007869 1.8e-140 503.8 508 55.9
HanXRQChr15g0490721 Helianthus annuus HOM05D005929 ORTHO05D007869 2.0e-139 500.4 500 57.8
Ah.03g144730 Amaranthus hybridus HOM05D005929 ORTHO05D007869 2.5e-139 500.0 514 57.0
MSTRG.23760 Avicennia marina HOM05D005929 ORTHO05D007869 5.7e-139 498.8 518 56.4
Nitab4.5_0010605g0010 Nicotiana tabacum HOM05D005929 ORTHO05D007869 1.3e-138 497.7 538 54.8
Peaxi162Scf00964g00160 Petunia axillaris HOM05D005929 ORTHO05D007869 1.7e-138 497.3 540 53.5
Eucgr.H02007 Eucalyptus grandis HOM05D005929 ORTHO05D007869 6.3e-138 495.4 526 56.5
CAN.G836.71 Capsicum annuum HOM05D005929 ORTHO05D007869 5.3e-137 492.3 502 56.8
PGSC0003DMG400015776 Solanum tuberosum HOM05D005929 ORTHO05D007869 5.3e-137 492.3 525 55.2
Sopen02g035300 Solanum pennellii HOM05D005929 ORTHO05D007869 3.8e-135 486.1 516 55.4
Lsat_1_v5_gn_4_168021 Lactuca sativa HOM05D005929 ORTHO05D007869 5.0e-135 485.7 491 57.4
Solyc02g090650.4 Solanum lycopersicum HOM05D005929 ORTHO05D007869 5.0e-135 485.7 527 54.8
ECA232G2456 Erigeron canadensis HOM05D005929 ORTHO05D007869 6.5e-135 485.3 494 57.3
Oeu039068.2 Olea europaea HOM05D005929 ORTHO05D007869 6.5e-135 485.3 510 53.7
Lj4A143G78 Lonicera japonica HOM05D005929 ORTHO05D007869 1.1e-131 474.6 518 54.2
ATR0100G001 Amborella trichopoda HOM05D005929 ORTHO05D007869 4.4e-131 472.6 518 51.5
HPP92_009382 Vanilla planifolia HOM05D005929 ORTHO05D007869 4.4e-131 472.6 518 55.8
Aqoxy5G01270 Aquilegia oxysepala HOM05D005929 ORTHO05D007869 2.2e-130 470.3 525 51.4
Nitab4.5_0000310g0090 Nicotiana tabacum HOM05D005929 ORTHO05D007869 2.6e-128 463.4 543 52.5
unitig_899.g14965 Utricularia gibba HOM05D005929 ORTHO05D007869 4.4e-123 446.0 541 51.4
Os10g0382300 Oryza sativa ssp. japonica HOM05D005929 ORTHO05D007869 2.0e-120 437.2 522 50.0
Zm00001eb223840 Zea mays HOM05D005929 ORTHO05D007869 1.0e-116 424.9 518 48.8
QL06p041881 Quercus lobata HOM05D005929 ORTHO05D007869 5.9e-112 409.1 389 57.8
AUR62003860 Chenopodium quinoa HOM05D005929 ORTHO05D007869 1.7e-103 380.9 406 53.9
Cpa.g.sc55.172 Carica papaya HOM05D005929 ORTHO05D007869 6.8e-100 369.0 340 59.1
AUR62001947 Chenopodium quinoa HOM05D005929 ORTHO05D007869 2.0e-99 367.5 401 52.1
SalBow1G6022 Salvia bowleyana HOM05D005929 ORTHO05D007869 5.9e-96 355.9 304 61.8
Ca_22183_v3 Cicer arietinum L. HOM05D005929 ORTHO05D007869 2.6e-91 340.5 366 52.2
Duzib264G1189 Durio zibethinus HOM05D005929 ORTHO05D007869 2.6e-91 340.5 513 42.7
CDE10G0678 Ceratophyllum demersum HOM05D005929 ORTHO05D007869 6.4e-90 335.9 278 62.6
Lalb_Chr09g0333751 Lupinus albus HOM05D005929 ORTHO05D007869 2.4e-89 334.0 355 51.3
Pp3c4_14260 Physcomitrium patens HOM05D005929 ORTHO05D007869 1.1e-81 308.5 570 37.2
Mapoly0148s0013 Marchantia polymorpha HOM05D005929 ORTHO05D007869 1.4e-76 291.6 304 48.7
SMO116G0373 Selaginella moellendorffii HOM05D005929 ORTHO05D007869 1.1e-68 265.4 491 36.3
RcHm_v2.0_Chr7g0235891 Rosa chinensis HOM05D005929 ORTHO05D007869 5.6e-54 216.5 186 60.8
SEGI_10908 Sequoiadendron giganteum HOM05D005929 ORTHO05D000002 4.0e-52 210.3 360 39.4
Lalb_Chr09g0333761 Lupinus albus HOM05D005929 ORTHO05D007869 5.3e-44 183.3 161 68.3
PSO339G4212 Papaver somniferum HOM05D005929 ORTHO05D007869 1.3e-42 178.7 154 59.7
Cpa.g.sc55.170 Carica papaya HOM05D005929 ORTHO05D007869 1.8e-39 168.3 137 73.7
QL06p041873 Quercus lobata HOM05D005929 ORTHO05D007869 1.1e-36 159.1 135 70.4
Hma1.2p1_0200F.1_g086010 Hydrangea macrophylla HOM05D005929 ORTHO05D007869 5.1e-31 140.2 236 39.8
ATR0833G001 Amborella trichopoda HOM05D005929 ORTHO05D007869 1.3e-29 135.6 134 57.5
DCAR_001419 Daucus carota HOM05D005929 ORTHO05D007869 5.5e-25 120.2 240 35.0
Haze_15421 Corylus avellana HOM05D005929 ORTHO05D007869 7.9e-24 116.3 147 49.7
Lsat_1_v5_gn_2_14601 Lactuca sativa HOM05D005929 ORTHO05D029973 6.7e-23 113.2 62 83.9
MBI08_g05057_MAGBIO Magnolia biondii HOM05D005929 ORTHO05D029973 2.8e-21 107.8 115 48.7
QL06p041946 Quercus lobata HOM05D005929 ORTHO05D007869 6.9e-20 103.2 144 46.5
CDE10G0504 Ceratophyllum demersum HOM05D005929 ORTHO05D007869 1.6e-16 92.0 236 32.2
Cre01.g029050 Chlamydomonas reinhardtii HOM05D003178 ORTHO05D003636 6.1e-08 63.5 133 31.6
MBI16_g22817_MAGBIO Magnolia biondii HOM05D005929 ORTHO05D029973 9.7e-06 56.2 35 77.1


User provided reference genes

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