Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT5G65207 Arabidopsis thaliana HOM05D008955 ORTHO05D011140 2.4e-34 148.3 74 100.0
AL8G42740 Arabidopsis lyrata HOM05D008955 ORTHO05D011140 1.4e-26 122.5 74 86.5
Aa31LG1G16760 Aethionema arabicum HOM05D008955 ORTHO05D011140 3.2e-23 111.3 74 74.3
Thhalv10005237m.g Eutrema salsugineum HOM05D008955 ORTHO05D011140 7.1e-23 110.2 74 75.7
Sp2g28300 Schrenkiella parvula HOM05D008955 ORTHO05D011140 1.3e-21 105.9 74 75.7
BraA06t26134Z Brassica rapa HOM05D008955 ORTHO05D011140 1.7e-21 105.5 74 73.0
A02p43760 Brassica napus HOM05D008955 ORTHO05D011140 2.3e-21 105.1 74 71.6
C02p63900 Brassica napus HOM05D008955 ORTHO05D011140 3.0e-21 104.8 74 71.6
BolC3t18348H Brassica oleracea HOM05D008955 ORTHO05D011140 5.1e-21 104.0 74 71.6
BcaC01g02755 Brassica carinata HOM05D008955 ORTHO05D011140 8.7e-21 103.2 74 70.3
C03p60890 Brassica napus HOM05D008955 ORTHO05D011140 8.7e-21 103.2 74 70.3
BraA02t09300Z Brassica rapa HOM05D008955 ORTHO05D011140 8.7e-21 103.2 74 70.3
BcaB02g09884 Brassica carinata HOM05D008955 ORTHO05D011140 1.1e-20 102.8 74 73.0
BolC2t12458H Brassica oleracea HOM05D008955 ORTHO05D011140 1.1e-20 102.8 74 70.3
CARHR279130 Cardamine hirsuta HOM05D008955 ORTHO05D011140 2.1e-19 98.6 74 70.3
Carub.0008s2606 Capsella rubella HOM05D008955 ORTHO05D011140 8.1e-19 96.7 75 64.0
A09p08950 Brassica napus HOM05D008955 ORTHO05D011140 7.6e-17 90.1 75 62.7
C09p10390 Brassica napus HOM05D008955 ORTHO05D011140 7.6e-17 90.1 75 62.7
BolC9t53941H Brassica oleracea HOM05D008955 ORTHO05D011140 7.6e-17 90.1 75 62.7
Thhalv10015184m.g Eutrema salsugineum HOM05D008955 ORTHO05D011140 9.3e-15 83.2 76 60.5
BcaB04g20006 Brassica carinata HOM05D008955 ORTHO05D011140 3.5e-14 81.3 76 60.5
CARHR203270 Cardamine hirsuta HOM05D008955 ORTHO05D011140 2.3e-13 78.6 75 56.0
Sp6g33360 Schrenkiella parvula HOM05D008955 ORTHO05D011140 3.9e-13 77.8 74 59.5
SpUn0247_0030 Schrenkiella parvula HOM05D008955 ORTHO05D011140 3.9e-13 77.8 74 59.5
BcaB08g37146 Brassica carinata HOM05D008955 ORTHO05D011140 4.3e-12 74.3 75 56.0
BcaC04g19348 Brassica carinata HOM05D008955 ORTHO05D011140 3.7e-11 71.2 76 53.9
C09p67510 Brassica napus HOM05D008955 ORTHO05D011140 3.7e-11 71.2 76 53.9
BolC9t59511H Brassica oleracea HOM05D008955 ORTHO05D011140 3.7e-11 71.2 76 53.9
A10p27450 Brassica napus HOM05D008955 ORTHO05D011140 8.1e-11 70.1 76 53.9
BraA10t44797Z Brassica rapa HOM05D008955 ORTHO05D011140 8.1e-11 70.1 76 53.9
Carub.0006s0850 Capsella rubella HOM05D008955 ORTHO05D011140 3.1e-10 68.2 75 54.7
Aa31LG3G17090 Aethionema arabicum HOM05D008955 ORTHO05D011140 1.2e-09 66.2 75 52.0
CARHR203260 Cardamine hirsuta HOM05D008955 ORTHO05D011140 1.5e-09 65.9 73 52.1
THA.LOC109116864 Tarenaya hassleriana HOM05D008955 ORTHO05D011140 2.6e-09 65.1 76 52.6
BraA09t36546Z Brassica rapa HOM05D008955 ORTHO05D011140 1.9e-07 58.9 52 57.7
AL6G20490 Arabidopsis lyrata HOM05D008955 ORTHO05D011140 5.5e-07 57.4 73 47.9
THA.LOC109116285 Tarenaya hassleriana HOM05D008955 ORTHO05D011140 1.6e-06 55.8 74 54.1
AT5G10040 Arabidopsis thaliana HOM05D008955 ORTHO05D011140 2.1e-06 55.5 70 45.7


User provided reference genes

Program Settings