Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT5G64820 Arabidopsis thaliana HOM05D011184 ORTHO05D008048 6.6e-65 250.8 146 100.0
AL8G42300 Arabidopsis lyrata HOM05D011184 ORTHO05D008048 1.7e-52 209.5 150 85.3
Carub.0008s2565 Capsella rubella HOM05D011184 ORTHO05D008048 1.3e-49 199.9 146 78.1
CARHR278830 Cardamine hirsuta HOM05D011184 ORTHO05D008048 2.3e-49 199.1 151 74.8
Sp2g27900 Schrenkiella parvula HOM05D011184 ORTHO05D008048 8.7e-49 197.2 152 75.0
BcaB02g09833 Brassica carinata HOM05D011184 ORTHO05D008048 1.7e-44 183.0 152 70.4
BraA06t26099Z Brassica rapa HOM05D006130 ORTHO05D007491 1.6e-39 166.4 130 70.8
BcaC01g02716 Brassica carinata HOM05D006130 ORTHO05D007491 1.8e-38 162.9 148 64.9
C03p61340 Brassica napus HOM05D011184 ORTHO05D008048 1.8e-38 162.9 148 64.9
A06p31620 Brassica napus HOM05D011184 ORTHO05D008048 9.0e-38 160.6 148 64.2
BolC3t18394H Brassica oleracea HOM05D011184 ORTHO05D008048 9.0e-38 160.6 148 64.2
BolC2t12425H Brassica oleracea HOM05D011184 ORTHO05D008048 3.2e-35 152.1 146 62.3
Thhalv10005069m.g Eutrema salsugineum HOM05D011184 ORTHO05D008048 1.6e-34 149.8 153 65.4
A02p43510 Brassica napus HOM05D011184 ORTHO05D008048 3.0e-33 145.6 122 68.0
BraA02t09278Z Brassica rapa HOM05D011184 ORTHO05D008048 3.0e-33 145.6 122 68.0
C02p63590 Brassica napus HOM05D011184 ORTHO05D008048 2.2e-31 139.4 149 59.1
BcaC03g18280 Brassica carinata HOM05D011184 ORTHO05D008048 5.9e-29 131.3 139 58.3
Aa31LG1G17100 Aethionema arabicum HOM05D006130 ORTHO05D007491 2.2e-28 129.4 162 50.0
BcaB07g29760 Brassica carinata HOM05D011184 ORTHO05D008048 7.2e-27 124.4 154 52.6
THA.LOC104799297 Tarenaya hassleriana HOM05D011184 ORTHO05D008048 8.8e-25 117.5 150 48.0
TWI79G0560 Tripterygium wilfordii HOM05D008407 ORTHO05D008048 1.7e-07 60.1 142 32.4
ClCG01G016050 Citrullus lanatus HOM05D008407 ORTHO05D008048 1.1e-06 57.4 135 28.1
Lj4g0011503 Lotus japonicus HOM05D008407 ORTHO05D008048 1.1e-06 57.4 149 29.5
Ah.02g125950 Amaranthus hybridus HOM05D011184 ORTHO05D008048 5.3e-06 55.1 142 25.4


User provided reference genes

Program Settings