Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT5G63690 Arabidopsis thaliana HOM05D006058 ORTHO05D007686 3.0e-75 285.0 140 100.0
AL8G40840 Arabidopsis lyrata HOM05D006058 ORTHO05D007686 5.9e-71 270.8 140 97.1
BraA06t25979Z Brassica rapa HOM05D006058 ORTHO05D007686 6.8e-67 257.3 140 90.0
Sp2g26790 Schrenkiella parvula HOM05D006058 ORTHO05D007686 3.4e-66 255.0 143 88.8
BcaC01g02630 Brassica carinata HOM05D006058 ORTHO05D007686 4.4e-66 254.6 140 88.6
C03p62750 Brassica napus HOM05D006058 ORTHO05D007686 4.4e-66 254.6 140 88.6
BcaB02g09737 Brassica carinata HOM05D006058 ORTHO05D007686 1.3e-65 253.1 142 88.0
BolC3t18529H Brassica oleracea HOM05D006058 ORTHO05D007686 1.3e-65 253.1 140 87.9
BcaC03g18221 Brassica carinata HOM05D006058 ORTHO05D007686 4.9e-65 251.1 144 87.5
BolC2t12363H Brassica oleracea HOM05D006058 ORTHO05D007686 4.9e-65 251.1 144 87.5
BcaB07g29701 Brassica carinata HOM05D006058 ORTHO05D007686 6.4e-65 250.8 143 86.0
A06p30300 Brassica napus HOM05D006058 ORTHO05D007686 6.4e-65 250.8 140 86.4
Carub.0008s2446 Capsella rubella HOM05D006058 ORTHO05D007686 1.6e-63 246.1 138 87.0
A02p42950 Brassica napus HOM05D006058 ORTHO05D007686 1.7e-62 242.7 144 84.7
C02p62900 Brassica napus HOM05D006058 ORTHO05D007686 6.6e-62 240.7 140 86.4
CARHR277600 Cardamine hirsuta HOM05D006058 ORTHO05D007686 6.6e-62 240.7 138 86.2
Aa31LG10G11090 Aethionema arabicum HOM05D006058 ORTHO05D007686 4.3e-61 238.0 140 81.4
Thhalv10005102m.g Eutrema salsugineum HOM05D006058 ORTHO05D007686 3.6e-60 235.0 140 82.1
BraA02t09218Z Brassica rapa HOM05D006058 ORTHO05D007686 8.9e-59 230.3 135 85.2
THA.LOC104826323 Tarenaya hassleriana HOM05D006058 ORTHO05D007686 1.8e-51 206.1 138 71.0
Psat4g228760 Pisum sativum HOM05D006058 ORTHO05D007686 5.2e-51 204.5 136 69.9
RcHm_v2.0_Chr6g0292311 Rosa chinensis HOM05D006058 ORTHO05D007686 2.0e-50 202.6 133 69.9
Prupe.8G268000 Prunus persica HOM05D006058 ORTHO05D007686 4.4e-50 201.4 136 71.3
Sc26g0003460 Simmondsia chinensis HOM05D006058 ORTHO05D007686 4.4e-50 201.4 136 69.1
GSVIVG01011025001 Vitis vinifera HOM05D006058 ORTHO05D007686 5.8e-50 201.1 138 67.4
Duzib211G0114 Durio zibethinus HOM05D006058 ORTHO05D007686 7.6e-50 200.7 138 65.9
CSS0022820 Camellia sinensis var. sinensis HOM05D006058 ORTHO05D007686 9.9e-50 200.3 134 68.7
Thecc.01G288100 Theobroma cacao HOM05D006058 ORTHO05D007686 9.9e-50 200.3 138 65.9
Hma1.2p1_1049F.1_g251900 Hydrangea macrophylla HOM05D006058 ORTHO05D007686 2.9e-49 198.7 136 68.4
Potri.014G083500 Populus trichocarpa HOM05D006058 ORTHO05D007686 2.9e-49 198.7 136 64.0
MD12G1212600 Malus domestica HOM05D006058 ORTHO05D007686 3.8e-49 198.4 140 69.3
TWI23G1093 Tripterygium wilfordii HOM05D006058 ORTHO05D007686 3.8e-49 198.4 135 64.4
PGR119G2453 Punica granatum HOM05D006058 ORTHO05D007686 4.9e-49 198.0 137 65.7
Lj2g0026207 Lotus japonicus HOM05D006058 ORTHO05D007686 6.4e-49 197.6 138 67.4
Lalb_Chr07g0187491 Lupinus albus HOM05D006058 ORTHO05D007686 6.4e-49 197.6 138 66.7
Nn4g26080 Nelumbo nucifera HOM05D006058 ORTHO05D007686 8.4e-49 197.2 136 68.4
TPR.G16722 Trifolium pratense HOM05D006058 ORTHO05D007686 8.4e-49 197.2 136 66.2
DCAR_018372 Daucus carota HOM05D006058 ORTHO05D007686 1.1e-48 196.8 134 64.2
MD04G1200100 Malus domestica HOM05D006058 ORTHO05D007686 1.1e-48 196.8 140 69.3
CANSAT25G3509 Cannabis sativa HOM05D006058 ORTHO05D007686 1.4e-48 196.4 133 67.7
TPR.G8807 Trifolium pratense HOM05D006058 ORTHO05D007686 1.4e-48 196.4 136 64.0
FvH4_2g24470 Fragaria vesca HOM05D006058 ORTHO05D007686 1.9e-48 196.1 133 67.7
FAN24G0575 Fragaria x ananassa HOM05D006058 ORTHO05D007686 1.9e-48 196.1 133 67.7
FAN27G3183 Fragaria x ananassa HOM05D006058 ORTHO05D007686 1.9e-48 196.1 133 67.7
Medtr3g010210 Medicago truncatula HOM05D006058 ORTHO05D007686 1.9e-48 196.1 136 66.2
Oeu032852.1 Olea europaea HOM05D006058 ORTHO05D007686 1.9e-48 196.1 134 67.9
Hma1.2p1_0399F.1_g144340 Hydrangea macrophylla HOM05D006058 ORTHO05D007686 2.4e-48 195.7 136 67.6
Manes.07G087200 Manihot esculenta HOM05D006058 ORTHO05D007686 2.4e-48 195.7 134 67.2
Ca_03230_v3 Cicer arietinum L. HOM05D006058 ORTHO05D007686 4.1e-48 194.9 134 67.9
Glyma.01G089000 Glycine max HOM05D006058 ORTHO05D007686 4.1e-48 194.9 135 68.1
Glyma.04G146600 Glycine max HOM05D006058 ORTHO05D007686 4.1e-48 194.9 135 68.1
Peaxi162Scf00273g00034 Petunia axillaris HOM05D006058 ORTHO05D007686 5.4e-48 194.5 135 65.9
Ciclev10022776m.g Citrus clementina HOM05D006058 ORTHO05D007686 9.2e-48 193.7 138 65.9
Hund02088 Selenicereus undatus HOM05D006058 ORTHO05D007686 9.2e-48 193.7 138 64.5
Eucgr.H01614 Eucalyptus grandis HOM05D006058 ORTHO05D007686 1.2e-47 193.4 136 64.7
AUR62036672 Chenopodium quinoa HOM05D006058 ORTHO05D007686 1.6e-47 193.0 136 66.2
COL.COLO4_08051 Corchorus olitorius HOM05D006058 ORTHO05D007686 1.6e-47 193.0 138 65.9
vmacro02518 Vaccinium macrocarpon HOM05D006058 ORTHO05D007686 1.6e-47 193.0 134 66.4
MBI07_g41269_MAGBIO Magnolia biondii HOM05D006058 ORTHO05D007686 2.1e-47 192.6 136 66.9
Sabra02G0198900 Salix brachista HOM05D006058 ORTHO05D007686 2.7e-47 192.2 136 62.5
unitig_0.g1187 Utricularia gibba HOM05D006058 ORTHO05D007686 2.7e-47 192.2 134 63.4
TPR.G22635 Trifolium pratense HOM05D006058 ORTHO05D007686 3.5e-47 191.8 136 64.7
Nitab4.5_0009592g0010 Nicotiana tabacum HOM05D006058 ORTHO05D007686 4.6e-47 191.4 134 64.2
SGA_v2.0_scaffold130G34295 Striga asiatica HOM05D006058 ORTHO05D007686 6.0e-47 191.0 133 67.7
Gohir.A12G007700 Gossypium hirsutum HOM05D006058 ORTHO05D007686 7.8e-47 190.7 136 62.5
Phvul.002G050500 Phaseolus vulgaris HOM05D006058 ORTHO05D007686 7.8e-47 190.7 138 63.0
Aqoxy4G03219 Aquilegia oxysepala HOM05D006058 ORTHO05D007686 1.0e-46 190.3 138 65.9
Cc01_g20070 Coffea canephora HOM05D006058 ORTHO05D007686 1.3e-46 189.9 139 62.6
TAR636G0052 Trochodendron aralioides HOM05D006058 ORTHO05D007686 3.9e-46 188.3 136 65.4
Nitab4.5_0001499g0140 Nicotiana tabacum HOM05D006058 ORTHO05D007686 5.1e-46 188.0 134 63.4
Nitab4.5_0004672g0030 Nicotiana tabacum HOM05D006058 ORTHO05D007686 6.6e-46 187.6 134 61.9
Peaxi162Scf00026g00313 Petunia axillaris HOM05D006058 ORTHO05D007686 6.6e-46 187.6 134 64.9
MELO3C015303.2 Cucumis melo HOM05D006058 ORTHO05D007686 8.6e-46 187.2 138 60.1
CsaV3_1G038790 Cucumis sativus L. HOM05D006058 ORTHO05D007686 8.6e-46 187.2 138 60.1
Atru.chr5.1299 Acer truncatum HOM05D006058 ORTHO05D007686 1.5e-45 186.4 138 64.5
Gohir.D12G007100 Gossypium hirsutum HOM05D006058 ORTHO05D007686 1.9e-45 186.0 136 60.3
Ah.10g033440 Amaranthus hybridus HOM05D006058 ORTHO05D007686 5.6e-45 184.5 138 62.3
Gorai.008G007300 Gossypium raimondii HOM05D006058 ORTHO05D007686 5.6e-45 184.5 136 59.6
HanXRQChr03g0093951 Helianthus annuus HOM05D006058 ORTHO05D007686 7.3e-45 184.1 135 60.0
Lju470C11T9 Lonicera japonica HOM05D006058 ORTHO05D007686 7.3e-45 184.1 137 65.0
CiPaw.07G098200 Carya illinoinensis HOM05D006058 ORTHO05D007686 1.2e-44 183.3 136 64.7
BolC4t22707H Brassica oleracea HOM05D006058 ORTHO05D007686 2.1e-44 182.6 93 90.3
PSO170G2912 Papaver somniferum HOM05D006058 ORTHO05D007686 2.1e-44 182.6 136 64.0
PSO407G0089 Papaver somniferum HOM05D006058 ORTHO05D007686 3.6e-44 181.8 136 63.2
SalBow3G0902 Salvia bowleyana HOM05D006058 ORTHO05D007686 3.6e-44 181.8 133 63.2
HanXRQChr15g0476421 Helianthus annuus HOM05D006058 ORTHO05D007686 6.2e-44 181.0 138 62.3
Prupe.3G123100 Prunus persica HOM05D006058 ORTHO05D007686 6.2e-44 181.0 136 66.9
vmacro04594 Vaccinium macrocarpon HOM05D006058 ORTHO05D007686 6.2e-44 181.0 129 65.1
Cfa006057 Carpinus fangiana HOM05D006058 ORTHO05D007686 6.9e-43 177.6 136 63.2
QL12p042454 Quercus lobata HOM05D006058 ORTHO05D007686 6.9e-43 177.6 137 63.5
Hund29081 Selenicereus undatus HOM05D006058 ORTHO05D007686 6.9e-43 177.6 130 62.3
Hund29083 Selenicereus undatus HOM05D006058 ORTHO05D007686 6.9e-43 177.6 130 62.3
CDE02G3716 Ceratophyllum demersum HOM05D006058 ORTHO05D007686 1.2e-42 176.8 133 60.2
Solyc12g014020.2 Solanum lycopersicum HOM05D006058 ORTHO05D007686 4.4e-42 174.9 122 65.6
Sopen12g005770 Solanum pennellii HOM05D006058 ORTHO05D007686 4.4e-42 174.9 122 65.6
arahy.Tifrunner.gnm1.ann1.SHER6S Arachis hypogaea HOM05D006058 ORTHO05D007686 5.8e-42 174.5 119 67.2
arahy.Tifrunner.gnm1.ann1.Y2QWLJ Arachis hypogaea HOM05D006058 ORTHO05D007686 7.6e-42 174.1 117 68.4
PGSC0003DMG400015370 Solanum tuberosum HOM05D006058 ORTHO05D007686 9.9e-42 173.7 122 65.6
Zm00001eb106990 Zea mays HOM05D006058 ORTHO05D007686 2.9e-41 172.2 142 58.5
Rhsim13G0018500 Rhododendron simsii HOM05D003625 ORTHO05D004382 8.4e-41 170.6 117 68.4
Actinidia00707 Actinidia chinensis HOM05D006058 ORTHO05D007686 3.2e-40 168.7 117 68.4
SHI14488 Sapria himalayana HOM05D006058 ORTHO05D007686 7.1e-40 167.5 137 58.4
EL10Ac7g17168 Beta vulgaris HOM05D006058 ORTHO05D007686 9.3e-40 167.2 138 58.7
Prupe.8G250400 Prunus persica HOM05D006058 ORTHO05D007686 2.7e-39 165.6 111 68.5
VMungo1215G3318 Vigna mungo HOM05D006058 ORTHO05D007686 1.0e-38 163.7 117 64.1
Aa31LG1G18150 Aethionema arabicum HOM05D000706 ORTHO05D001554 6.6e-38 161.0 85 85.9
Sed0020474 Sechium edule HOM05D006058 ORTHO05D007686 1.1e-37 160.2 105 66.7
SEGI_21939 Sequoiadendron giganteum HOM05D006058 ORTHO05D007686 1.1e-37 160.2 137 53.3
HPP92_016068 Vanilla planifolia HOM05D006058 ORTHO05D007686 1.1e-37 160.2 135 57.0
ClCG03G017360 Citrullus lanatus HOM05D006058 ORTHO05D007686 3.3e-37 158.7 102 67.6
Migut.D00240 Erythranthe guttata HOM05D006058 ORTHO05D007686 3.3e-37 158.7 139 54.0
Eucgr.H01617 Eucalyptus grandis HOM05D006058 ORTHO05D007686 3.6e-36 155.2 136 55.1
Nn3g21231 Nelumbo nucifera HOM05D006058 ORTHO05D007686 2.4e-35 152.5 117 61.5
ECA240G0292 Erigeron canadensis HOM05D006058 ORTHO05D007686 1.2e-34 150.2 113 60.2
Manes.10G061700 Manihot esculenta HOM05D006058 ORTHO05D007686 4.5e-34 148.3 131 54.2
CAN.G964.10 Capsicum annuum HOM05D006058 ORTHO05D007686 5.8e-34 147.9 135 53.3
Mapoly0122s0023 Marchantia polymorpha HOM05D006058 ORTHO05D007686 9.9e-34 147.1 131 52.7
SMO244G0033 Selaginella moellendorffii HOM05D006058 ORTHO05D007686 1.9e-32 142.9 122 55.7
AagrBONN_evm.TU.Sc2ySwM_369.269 Anthoceros agrestis HOM05D006058 ORTHO05D007686 9.3e-32 140.6 119 53.8
Mapoly0068s0046 Marchantia polymorpha HOM05D006058 ORTHO05D007686 3.5e-31 138.7 114 54.4
ATR0225G019 Amborella trichopoda HOM05D006058 ORTHO05D007686 7.9e-31 137.5 109 60.6
Pp3c3_34830 Physcomitrium patens HOM05D006058 ORTHO05D007686 1.5e-29 133.3 120 52.5
CBR_g26410 Chara braunii HOM05D006058 ORTHO05D007686 2.5e-29 132.5 126 50.0
EL10Ac3g06921 Beta vulgaris HOM05D006058 ORTHO05D007686 8.1e-28 127.5 92 68.5
AUR62034597 Chenopodium quinoa HOM05D006058 ORTHO05D007686 1.8e-27 126.3 95 65.3
TAR365G0318 Trochodendron aralioides HOM05D006058 ORTHO05D007686 1.7e-25 119.8 83 61.4
CBR_g24266 Chara braunii HOM05D006058 ORTHO05D007686 1.0e-22 110.5 120 44.2
Sc05g0004330 Simmondsia chinensis HOM05D006058 ORTHO05D007686 1.3e-22 110.2 86 64.0
MBI07_g41268_MAGBIO Magnolia biondii HOM05D002731 ORTHO05D003073 2.4e-19 99.4 90 53.3
vmacro09159 Vaccinium macrocarpon HOM05D006058 ORTHO05D007686 5.7e-13 78.2 60 61.7
QL12p023442 Quercus lobata HOM05D006058 ORTHO05D007686 7.4e-13 77.8 89 43.8


User provided reference genes

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