Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT5G63000 Arabidopsis thaliana HOM05D000922 ORTHO05D008200 3.9e-108 394.8 202 100.0
AL8G40030 Arabidopsis lyrata HOM05D000922 ORTHO05D008200 4.1e-105 384.8 202 98.5
Carub.0008s2371 Capsella rubella HOM05D000922 ORTHO05D008200 6.5e-103 377.5 202 96.0
BraA06t25925Z Brassica rapa HOM05D000922 ORTHO05D008200 3.2e-102 375.2 202 93.6
Thhalv10004944m.g Eutrema salsugineum HOM05D000922 ORTHO05D008200 4.2e-102 374.8 202 94.6
BcaC01g02547 Brassica carinata HOM05D000922 ORTHO05D008200 1.2e-101 373.2 202 93.1
A06p29780 Brassica napus HOM05D000922 ORTHO05D008200 1.2e-101 373.2 202 93.1
C03p63610 Brassica napus HOM05D000922 ORTHO05D008200 1.2e-101 373.2 202 93.1
BolC3t18619H Brassica oleracea HOM05D000922 ORTHO05D008200 1.2e-101 373.2 202 93.1
BcaB02g09714 Brassica carinata HOM05D000922 ORTHO05D008200 2.1e-101 372.5 203 94.1
CARHR276810 Cardamine hirsuta HOM05D000922 ORTHO05D008200 3.6e-101 371.7 202 94.1
Sp2g26130 Schrenkiella parvula HOM05D000922 ORTHO05D008200 3.7e-98 361.7 195 93.3
THA.LOC104818216 Tarenaya hassleriana HOM05D000922 ORTHO05D008200 5.2e-84 314.7 201 79.1
COL.COLO4_30070 Corchorus olitorius HOM05D000922 ORTHO05D008200 7.5e-83 310.8 204 77.0
CiPaw.11G024500 Carya illinoinensis HOM05D000922 ORTHO05D008200 6.3e-82 307.8 205 75.6
Gohir.D09G167000 Gossypium hirsutum HOM05D000922 ORTHO05D008200 5.4e-81 304.7 204 76.0
Gorai.006G188800 Gossypium raimondii HOM05D000922 ORTHO05D008200 5.4e-81 304.7 204 76.0
Aa31LG4G16810 Aethionema arabicum HOM05D002875 ORTHO05D003215 7.0e-81 304.3 187 81.8
Gohir.A09G171300 Gossypium hirsutum HOM05D000922 ORTHO05D008200 1.2e-80 303.5 204 75.5
Atru.chr9.2496 Acer truncatum HOM05D000922 ORTHO05D008200 1.6e-80 303.1 206 75.7
QL10p010977 Quercus lobata HOM05D000922 ORTHO05D008200 3.5e-80 302.0 201 77.1
Manes.14G064200 Manihot esculenta HOM05D000922 ORTHO05D008200 1.3e-79 300.1 201 76.6
Thecc.03G014600 Theobroma cacao HOM05D000922 ORTHO05D008200 1.3e-79 300.1 201 76.1
PGSC0003DMG400018154 Solanum tuberosum HOM05D000922 ORTHO05D008200 3.8e-79 298.5 194 76.8
Nn3g16820 Nelumbo nucifera HOM05D000922 ORTHO05D008200 3.3e-78 295.4 205 74.1
Glyma.17G088100 Glycine max HOM05D000922 ORTHO05D008200 4.2e-78 295.0 204 74.5
CAN.G1166.6 Capsicum annuum HOM05D000922 ORTHO05D008200 7.2e-78 294.3 202 74.8
Prupe.5G171600 Prunus persica HOM05D000922 ORTHO05D008200 9.5e-78 293.9 205 74.1
TWI39G0231 Tripterygium wilfordii HOM05D000922 ORTHO05D008200 1.2e-77 293.5 202 74.8
FAN04G0130 Fragaria x ananassa HOM05D000922 ORTHO05D008200 1.6e-77 293.1 202 74.3
Lj5C125T23 Lonicera japonica HOM05D000922 ORTHO05D008200 1.6e-77 293.1 205 75.6
Nitab4.5_0000514g0030 Nicotiana tabacum HOM05D000922 ORTHO05D008200 1.6e-77 293.1 203 74.4
CSS0000249 Camellia sinensis var. sinensis HOM05D000922 ORTHO05D008200 2.8e-77 292.4 207 74.9
FAN18G2418 Fragaria x ananassa HOM05D000922 ORTHO05D008200 2.8e-77 292.4 202 74.3
FAN18G3465 Fragaria x ananassa HOM05D000922 ORTHO05D008200 2.8e-77 292.4 202 74.3
Dinv20636 Davidia involucrata HOM05D000922 ORTHO05D008200 3.6e-77 292.0 204 74.0
FAN13G3248 Fragaria x ananassa HOM05D000922 ORTHO05D008200 3.6e-77 292.0 202 74.3
Rhsim08G0173800 Rhododendron simsii HOM05D000922 ORTHO05D007418 4.7e-77 291.6 204 75.0
vmacro19401 Vaccinium macrocarpon HOM05D000922 ORTHO05D008200 4.7e-77 291.6 205 73.2
FvH4_5g05480 Fragaria vesca HOM05D000922 ORTHO05D008200 1.4e-76 290.0 202 73.8
Nitab4.5_0008678g0030 Nicotiana tabacum HOM05D000922 ORTHO05D008200 1.8e-76 289.7 186 78.5
Solyc03g112810.3 Solanum lycopersicum HOM05D000922 ORTHO05D008200 1.8e-76 289.7 201 74.6
CANSAT80G0818 Cannabis sativa HOM05D000922 ORTHO05D008200 3.0e-76 288.9 198 74.2
Ciclev10022297m.g Citrus clementina HOM05D000922 ORTHO05D008200 5.2e-76 288.1 203 74.4
Lsat_1_v5_gn_5_15061 Lactuca sativa HOM05D000922 ORTHO05D008200 5.2e-76 288.1 196 74.5
DCAR_026150 Daucus carota HOM05D000922 ORTHO05D008200 6.8e-76 287.7 201 73.6
MD06G1172200 Malus domestica HOM05D000922 ORTHO05D008200 6.8e-76 287.7 204 73.0
GSVIVG01007722001 Vitis vinifera HOM05D000922 ORTHO05D008200 6.8e-76 287.7 205 71.7
Duzib205G0455 Durio zibethinus HOM05D000922 ORTHO05D008200 8.9e-76 287.3 188 77.7
RcHm_v2.0_Chr7g0193351 Rosa chinensis HOM05D000922 ORTHO05D008200 8.9e-76 287.3 204 72.1
Hund09449 Selenicereus undatus HOM05D000922 ORTHO05D008200 1.2e-75 287.0 205 71.2
arahy.Tifrunner.gnm1.ann1.RA2V7W Arachis hypogaea HOM05D000922 ORTHO05D008200 1.5e-75 286.6 204 71.1
Phvul.003G201800 Phaseolus vulgaris HOM05D000922 ORTHO05D008200 1.5e-75 286.6 202 73.3
Sabra15G0103100 Salix brachista HOM05D000922 ORTHO05D008200 1.5e-75 286.6 184 78.3
ClCG01G013230 Citrullus lanatus HOM05D000922 ORTHO05D008200 2.0e-75 286.2 206 70.9
Migut.O00114 Erythranthe guttata HOM05D000922 ORTHO05D008200 2.0e-75 286.2 193 73.6
MSTRG.11466 Avicennia marina HOM05D000922 ORTHO05D008200 2.6e-75 285.8 205 70.2
CsaV3_1G008590 Cucumis sativus L. HOM05D000922 ORTHO05D008200 7.5e-75 284.3 206 69.9
Eucgr.G00068 Eucalyptus grandis HOM05D000922 ORTHO05D008200 7.5e-75 284.3 205 71.7
VMungo1215G1163 Vigna mungo HOM05D000922 ORTHO05D008200 7.5e-75 284.3 199 74.9
TAR629G0323 Trochodendron aralioides HOM05D000922 ORTHO05D008200 9.8e-75 283.9 207 72.0
Potri.015G078600 Populus trichocarpa HOM05D000922 ORTHO05D008200 1.3e-74 283.5 195 74.4
Sopen03g031890 Solanum pennellii HOM05D000922 ORTHO05D008200 1.3e-74 283.5 184 77.7
Psat4g058400 Pisum sativum HOM05D000922 ORTHO05D008200 1.7e-74 283.1 203 70.9
MELO3C002273.2 Cucumis melo HOM05D000922 ORTHO05D008200 2.8e-74 282.3 206 69.4
MD14G1178100 Malus domestica HOM05D000922 ORTHO05D008200 4.9e-74 281.6 201 72.1
Cc04_g12150 Coffea canephora HOM05D000922 ORTHO05D008200 1.1e-73 280.4 206 70.9
ECA246G4361 Erigeron canadensis HOM05D000922 ORTHO05D008200 1.1e-73 280.4 195 72.8
Lj4g0019609 Lotus japonicus HOM05D000922 ORTHO05D008200 1.8e-73 279.6 205 70.2
SalBow1G6106 Salvia bowleyana HOM05D000922 ORTHO05D008200 1.8e-73 279.6 201 71.1
SalBow5G5253 Salvia bowleyana HOM05D000922 ORTHO05D008200 1.8e-73 279.6 201 71.1
Lalb_Chr12g0201661 Lupinus albus HOM05D000922 ORTHO05D008200 4.1e-73 278.5 197 73.1
Sed0005243 Sechium edule HOM05D000922 ORTHO05D008200 7.0e-73 277.7 204 70.6
Haze_07527 Corylus avellana HOM05D000922 ORTHO05D008200 2.0e-72 276.2 220 67.7
SGA_v2.0_scaffold90G27896 Striga asiatica HOM05D000922 ORTHO05D008200 2.0e-72 276.2 191 73.3
Ca_21935_v3 Cicer arietinum L. HOM05D000922 ORTHO05D008200 7.8e-72 274.2 205 69.8
Medtr4g105570 Medicago truncatula HOM05D000922 ORTHO05D008200 7.8e-72 274.2 202 68.8
PGR044G1577 Punica granatum HOM05D000922 ORTHO05D008200 1.3e-71 273.5 205 70.2
FAN08G1692 Fragaria x ananassa HOM05D000922 ORTHO05D008200 5.0e-71 271.6 223 66.4
arahy.Tifrunner.gnm1.ann1.3C9G4H Arachis hypogaea HOM05D000922 ORTHO05D008200 6.6e-71 271.2 198 70.2
Aqoxy3G02881 Aquilegia oxysepala HOM05D000922 ORTHO05D008200 1.1e-70 270.4 204 68.1
unitig_0.g1435 Utricularia gibba HOM05D000922 ORTHO05D008200 1.1e-70 270.4 201 67.7
Peaxi162Scf00089g01850 Petunia axillaris HOM05D000922 ORTHO05D008200 1.5e-70 270.0 206 70.9
HPP92_011872 Vanilla planifolia HOM05D000922 ORTHO05D008200 2.5e-70 269.2 194 69.1
AUR62010095 Chenopodium quinoa HOM05D000922 ORTHO05D008200 3.3e-70 268.9 189 71.4
Os01g0271000 Oryza sativa ssp. japonica HOM05D000922 ORTHO05D008200 5.6e-70 268.1 202 71.3
AUR62013091 Chenopodium quinoa HOM05D000922 ORTHO05D008200 1.2e-69 266.9 189 70.9
Zm00001eb332970 Zea mays HOM05D000922 ORTHO05D008200 2.8e-69 265.8 201 70.1
arahy.Tifrunner.gnm1.ann1.R1G0J4 Arachis hypogaea HOM05D000922 ORTHO05D008200 4.0e-68 261.9 197 68.5
Actinidia04732 Actinidia chinensis HOM05D000922 ORTHO05D007418 6.8e-68 261.2 204 69.6
PGR044G0925 Punica granatum HOM05D000922 ORTHO05D008200 6.8e-68 261.2 205 66.3
MBI16_g39217_MAGBIO Magnolia biondii HOM05D000922 ORTHO05D008200 1.2e-67 260.4 224 64.3
CDE07G1875 Ceratophyllum demersum HOM05D000922 ORTHO05D008200 2.6e-67 259.2 174 77.6
EL10Ac9g21439 Beta vulgaris HOM05D000922 ORTHO05D008200 3.4e-67 258.8 233 59.7
PSO832G1073 Papaver somniferum HOM05D000922 ORTHO05D008200 1.9e-65 253.1 205 64.4
Dinv38572 Davidia involucrata HOM05D000922 ORTHO05D008200 4.3e-62 241.9 314 47.8
Sc04g0001730 Simmondsia chinensis HOM05D000922 ORTHO05D008200 1.2e-61 240.4 161 77.0
arahy.Tifrunner.gnm1.ann1.HJA5XH Arachis hypogaea HOM05D000922 ORTHO05D008200 3.6e-61 238.8 240 55.0
SHI38067 Sapria himalayana HOM05D000922 ORTHO05D008200 8.9e-60 234.2 204 59.8
HanXRQChr05g0155781 Helianthus annuus HOM05D000922 ORTHO05D008200 2.2e-58 229.6 160 73.8
ATR1091G108 Amborella trichopoda HOM05D000922 ORTHO05D008200 3.0e-55 219.2 153 72.5
Manes.05G195400 Manihot esculenta HOM05D000922 ORTHO05D008200 2.6e-51 206.1 133 76.7
Cfa019117 Carpinus fangiana HOM05D000922 ORTHO05D008200 6.6e-47 191.4 116 82.8
arahy.Tifrunner.gnm1.ann1.UWQ2W3 Arachis hypogaea HOM05D000922 ORTHO05D008200 1.1e-46 190.7 134 70.9
arahy.Tifrunner.gnm1.ann1.PQAW0Q Arachis hypogaea HOM05D000922 ORTHO05D008200 4.3e-46 188.7 118 78.0
TPR.G37467 Trifolium pratense HOM05D000922 ORTHO05D008200 4.3e-46 188.7 134 72.4
TAR371G0469 Trochodendron aralioides HOM05D000922 ORTHO05D008200 3.1e-44 182.6 133 70.7
Oeu023435.1 Olea europaea HOM05D000922 ORTHO05D008200 8.4e-42 174.5 106 79.2
SEGI_40590 Sequoiadendron giganteum HOM05D000922 ORTHO05D008200 1.4e-41 173.7 152 60.5
EL10Ac5g12019 Beta vulgaris HOM05D000922 ORTHO05D008200 2.7e-40 169.5 118 70.3
Glyma.05G038900 Glycine max HOM05D000922 ORTHO05D008200 7.8e-40 167.9 108 76.9
Mapoly0191s0008 Marchantia polymorpha HOM05D000922 ORTHO05D008200 1.4e-33 147.1 185 46.5
AagrBONN_evm.TU.Sc2ySwM_228.4800 Anthoceros agrestis HOM05D000922 ORTHO05D008200 3.2e-33 146.0 177 43.5
arahy.Tifrunner.gnm1.ann1.Q2CJ89 Arachis hypogaea HOM05D000922 ORTHO05D008200 2.1e-32 143.3 147 54.4
Peaxi162Scf00089g01839 Petunia axillaris HOM05D000922 ORTHO05D008200 3.9e-31 139.0 189 47.6
TPR.G11031 Trifolium pratense HOM05D000922 ORTHO05D008200 1.9e-25 120.2 92 68.5
Pp3c17_17380 Physcomitrium patens HOM05D000922 ORTHO05D008200 3.9e-23 112.5 210 37.1
SMO111G0048 Selaginella moellendorffii HOM05D000922 ORTHO05D008200 5.1e-23 112.1 138 44.2
arahy.Tifrunner.gnm1.ann1.JAVP2G Arachis hypogaea HOM05D000922 ORTHO05D008200 7.4e-22 108.2 137 46.7
Cpa.g.sc76.32 Carica papaya HOM05D000922 ORTHO05D008200 1.6e-21 107.1 210 37.1
CBR_g38960 Chara braunii HOM05D000922 ORTHO05D008200 4.0e-20 102.4 247 30.0
MCO04G383 Micromonas commoda HOM05D000922 ORTHO05D008200 1.2e-11 74.3 205 28.3
arahy.Tifrunner.gnm1.ann1.RUR1T0 Arachis hypogaea HOM05D000034 ORTHO05D000037 7.1e-09 65.1 48 64.6
Medtr4g105580 Medicago truncatula HOM05D000922 ORTHO05D008200 1.3e-07 60.8 71 43.7
SGA_v2.0_scaffold25G11050 Striga asiatica HOM05D000922 ORTHO05D403871 6.7e-07 58.5 35 80.0
SGA_v2.0_scaffold116G32233 Striga asiatica HOM05D000922 ORTHO05D008200 8.7e-07 58.2 55 60.0


User provided reference genes

Program Settings