Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT5G62840 Arabidopsis thaliana HOM05D006935 ORTHO05D008944 8.0e-166 587.0 298 100.0
AL8G39840 Arabidopsis lyrata HOM05D006935 ORTHO05D008944 2.5e-159 565.5 298 97.3
Sp2g25990 Schrenkiella parvula HOM05D006935 ORTHO05D008944 1.1e-151 540.0 298 92.3
Carub.0008s2355 Capsella rubella HOM05D006935 ORTHO05D008944 2.5e-151 538.9 299 92.6
CARHR276620 Cardamine hirsuta HOM05D006935 ORTHO05D008944 2.1e-150 535.8 297 92.6
BcaB02g09696 Brassica carinata HOM05D006935 ORTHO05D008944 9.8e-148 526.9 298 90.6
BcaC01g02525 Brassica carinata HOM05D006935 ORTHO05D008944 8.3e-147 523.9 296 89.5
C03p63900 Brassica napus HOM05D006935 ORTHO05D008944 8.3e-147 523.9 296 89.5
BolC3t18645H Brassica oleracea HOM05D006935 ORTHO05D008944 8.3e-147 523.9 296 89.5
A06p29590 Brassica napus HOM05D006935 ORTHO05D008944 1.6e-145 519.6 296 88.5
Thhalv10004703m.g Eutrema salsugineum HOM05D006935 ORTHO05D008944 5.0e-144 514.6 298 88.6
BraA06t25905Z Brassica rapa HOM05D006935 ORTHO05D008944 1.9e-143 512.7 296 87.8
Aa31LG11G860 Aethionema arabicum HOM05D006935 ORTHO05D008944 7.5e-140 500.7 298 84.6
THA.LOC104798977 Tarenaya hassleriana HOM05D006935 ORTHO05D008944 4.7e-126 454.9 298 78.9
Cpa.g.sc124.48 Carica papaya HOM05D006935 ORTHO05D008944 4.0e-117 425.2 299 74.6
Gorai.007G001900 Gossypium raimondii HOM05D006935 ORTHO05D008944 2.0e-116 422.9 291 73.9
Thecc.03G010500 Theobroma cacao HOM05D006935 ORTHO05D008944 2.0e-116 422.9 292 74.0
CSS0041391 Camellia sinensis var. sinensis HOM05D006935 ORTHO05D008944 1.1e-114 417.2 287 73.2
Gohir.D11G001000 Gossypium hirsutum HOM05D006935 ORTHO05D008944 2.4e-114 416.0 298 72.8
Duzib068G1137 Durio zibethinus HOM05D006935 ORTHO05D008944 9.3e-114 414.1 301 72.1
MD14G1182500 Malus domestica HOM05D006935 ORTHO05D008944 1.6e-113 413.3 271 76.0
Atru.chr9.2451 Acer truncatum HOM05D006935 ORTHO05D008944 2.1e-113 412.9 304 69.4
Haze_07457 Corylus avellana HOM05D006935 ORTHO05D008944 2.1e-113 412.9 310 70.0
Gohir.A11G001400 Gossypium hirsutum HOM05D006935 ORTHO05D008944 2.7e-113 412.5 298 72.1
Manes.06G104000 Manihot esculenta HOM05D006935 ORTHO05D008944 3.5e-113 412.1 305 69.5
FvH4_5g05200 Fragaria vesca HOM05D006935 ORTHO05D008944 4.6e-113 411.8 295 70.8
PGR083G2867 Punica granatum HOM05D006935 ORTHO05D008944 4.6e-113 411.8 282 73.8
Ciclev10021410m.g Citrus clementina HOM05D006935 ORTHO05D008944 7.8e-113 411.0 291 71.8
Potri.015G074700 Populus trichocarpa HOM05D006935 ORTHO05D008944 7.8e-113 411.0 271 75.6
Actinidia19311 Actinidia chinensis HOM05D006935 ORTHO05D008944 1.3e-112 410.2 281 73.7
QL10p011920 Quercus lobata HOM05D006935 ORTHO05D008944 1.7e-112 409.8 300 71.0
Rhsim08G0171100 Rhododendron simsii HOM05D006935 ORTHO05D008944 3.9e-112 408.7 297 70.0
COL.COLO4_04599 Corchorus olitorius HOM05D006935 ORTHO05D008944 5.1e-112 408.3 301 69.1
CiPaw.11G027700 Carya illinoinensis HOM05D006935 ORTHO05D008944 1.1e-111 407.1 294 71.4
GSVIVG01007766001 Vitis vinifera HOM05D006935 ORTHO05D008944 1.5e-111 406.8 292 71.6
Sabra15G0098700 Salix brachista HOM05D006935 ORTHO05D008944 1.9e-111 406.4 297 70.4
Nn4g22789 Nelumbo nucifera HOM05D006935 ORTHO05D008944 3.3e-111 405.6 303 71.6
TWI81G0925 Tripterygium wilfordii HOM05D006935 ORTHO05D008944 3.3e-111 405.6 296 70.9
TWI81G0947 Tripterygium wilfordii HOM05D006935 ORTHO05D008944 3.3e-111 405.6 296 70.9
Cc04_g13740 Coffea canephora HOM05D006935 ORTHO05D008944 7.3e-111 404.4 304 70.7
Eucgr.B00368 Eucalyptus grandis HOM05D006935 ORTHO05D008944 7.3e-111 404.4 265 76.6
HanXRQChr16g0517271 Helianthus annuus HOM05D006935 ORTHO05D008944 7.3e-111 404.4 308 66.2
SalBow5G1860 Salvia bowleyana HOM05D006935 ORTHO05D008944 7.3e-111 404.4 301 71.1
MSTRG.11442 Avicennia marina HOM05D006935 ORTHO05D008944 9.6e-111 404.1 307 68.7
vmacro19376 Vaccinium macrocarpon HOM05D006935 ORTHO05D008944 1.3e-110 403.7 298 68.5
RcHm_v2.0_Chr7g0193711 Rosa chinensis HOM05D006935 ORTHO05D008944 3.6e-110 402.1 297 69.0
Lsat_1_v5_gn_5_17180 Lactuca sativa HOM05D006935 ORTHO05D008944 2.4e-109 399.4 306 67.0
Sopen03g033350 Solanum pennellii HOM05D006935 ORTHO05D008944 5.3e-109 398.3 261 74.3
Migut.I00022 Erythranthe guttata HOM05D006935 ORTHO05D008944 6.9e-109 397.9 238 79.4
Cfa019105 Carpinus fangiana HOM05D006935 ORTHO05D004872 2.6e-108 396.0 299 69.6
Solyc03g114250.4 Solanum lycopersicum HOM05D006935 ORTHO05D008944 2.6e-108 396.0 263 74.5
SGA_v2.0_scaffold90G27953 Striga asiatica HOM05D006935 ORTHO05D008944 2.6e-108 396.0 280 71.8
PGSC0003DMG400024494 Solanum tuberosum HOM05D006935 ORTHO05D008944 3.4e-108 395.6 291 70.1
CANSAT80G0279 Cannabis sativa HOM05D006935 ORTHO05D008944 7.6e-108 394.4 238 79.4
Lalb_Chr07g0182691 Lupinus albus HOM05D006935 ORTHO05D008944 1.7e-107 393.3 292 67.8
CsaV3_1G008420 Cucumis sativus L. HOM05D006935 ORTHO05D008944 1.4e-106 390.2 305 68.5
FAN04G2667 Fragaria x ananassa HOM05D006935 ORTHO05D008944 1.4e-106 390.2 287 70.0
Sc12g0005390 Simmondsia chinensis HOM05D006935 ORTHO05D008944 1.4e-106 390.2 288 70.8
Aqoxy3G02966 Aquilegia oxysepala HOM05D006935 ORTHO05D008944 4.2e-106 388.7 288 70.5
ECA236G1157 Erigeron canadensis HOM05D006935 ORTHO05D008944 5.4e-106 388.3 296 67.2
FAN18G4193 Fragaria x ananassa HOM05D006935 ORTHO05D004872 1.2e-105 387.1 254 75.6
Glyma.05G036900 Glycine max HOM05D006935 ORTHO05D008944 3.5e-105 385.6 286 68.2
VMungo1215G2532 Vigna mungo HOM05D006935 ORTHO05D008944 6.0e-105 384.8 247 75.7
TPR.G37522 Trifolium pratense HOM05D006935 ORTHO05D008944 1.0e-104 384.0 274 70.1
Phvul.003G199600 Phaseolus vulgaris HOM05D006935 ORTHO05D008944 1.7e-104 383.3 298 66.8
TAR622G0425 Trochodendron aralioides HOM05D006935 ORTHO05D008944 1.7e-104 383.3 230 80.0
MBI16_g32800_MAGBIO Magnolia biondii HOM05D006935 ORTHO05D008944 5.1e-104 381.7 271 71.2
ClCG01G013080 Citrullus lanatus HOM05D006935 ORTHO05D008944 8.7e-104 380.9 276 71.4
Ah.02g110460 Amaranthus hybridus HOM05D006935 ORTHO05D008944 1.1e-103 380.6 245 74.3
Nitab4.5_0005862g0020 Nicotiana tabacum HOM05D006935 ORTHO05D008944 1.1e-103 380.6 338 60.9
Medtr4g106970 Medicago truncatula HOM05D006935 ORTHO05D008944 1.9e-103 379.8 301 65.1
Lj4g0026943 Lotus japonicus HOM05D006935 ORTHO05D008944 3.3e-103 379.0 290 66.6
Hund09430 Selenicereus undatus HOM05D006935 ORTHO05D004872 3.6e-102 375.6 288 66.0
MBI16_g05651_MAGBIO Magnolia biondii HOM05D006935 ORTHO05D008944 6.2e-102 374.8 228 78.5
unitig_749.g13472 Utricularia gibba HOM05D006935 ORTHO05D008944 1.4e-101 373.6 284 67.6
Nitab4.5_0000852g0050 Nicotiana tabacum HOM05D006935 ORTHO05D008944 1.8e-101 373.2 298 66.4
MELO3C002259.2 Cucumis melo HOM05D006935 ORTHO05D008944 2.4e-101 372.9 255 74.1
PSO302G0172 Papaver somniferum HOM05D006935 ORTHO05D008944 1.7e-99 366.7 298 64.4
Os01g0660900 Oryza sativa ssp. japonica HOM05D006935 ORTHO05D008944 3.8e-99 365.5 238 75.2
Zm00001eb359580 Zea mays HOM05D006935 ORTHO05D008944 8.4e-99 364.4 293 65.2
Dinv09149 Davidia involucrata HOM05D006935 ORTHO05D008944 7.1e-98 361.3 268 72.8
EL10Ac5g10748 Beta vulgaris HOM05D006935 ORTHO05D008944 3.5e-97 359.0 228 74.6
AUR62008221 Chenopodium quinoa HOM05D006935 ORTHO05D008944 3.5e-97 359.0 239 73.6
HPP92_024712 Vanilla planifolia HOM05D006935 ORTHO05D008944 1.5e-95 353.6 292 65.1
SEGI_12501 Sequoiadendron giganteum HOM05D006935 ORTHO05D008944 7.4e-95 351.3 238 69.7
CAN.G781.17 Capsicum annuum HOM05D006935 ORTHO05D008944 2.1e-94 349.7 251 71.7
CDE04G2457 Ceratophyllum demersum HOM05D005049 ORTHO05D004872 5.3e-93 345.1 229 73.8
Peaxi162Scf00017g02821 Petunia axillaris HOM05D006935 ORTHO05D008944 5.3e-93 345.1 262 68.3
Oeu016368.1 Olea europaea HOM05D006935 ORTHO05D008944 1.0e-91 340.9 283 65.4
Pp3c16_7000 Physcomitrium patens HOM05D006935 ORTHO05D008944 6.5e-91 338.2 238 69.7
AUR62030975 Chenopodium quinoa HOM05D006935 ORTHO05D008944 2.5e-90 336.3 232 71.1
Ca_21910_v3 Cicer arietinum L. HOM05D006935 ORTHO05D008944 1.3e-86 323.9 251 66.1
Psat4g057680 Pisum sativum HOM05D006935 ORTHO05D008944 9.0e-85 317.8 260 65.0
Mapoly0091s0071 Marchantia polymorpha HOM05D006935 ORTHO05D008944 2.6e-84 316.2 240 64.6
FAN08G3443 Fragaria x ananassa HOM05D006935 ORTHO05D004872 9.7e-79 297.7 233 67.0
Peaxi162Scf00017g02830 Petunia axillaris HOM05D006935 ORTHO05D008944 2.0e-76 290.0 209 70.8
AagrBONN_evm.TU.Sc2ySwM_117.38 Anthoceros agrestis HOM05D006935 ORTHO05D008944 1.4e-74 283.9 198 72.2
ATR0730G238 Amborella trichopoda HOM05D006935 ORTHO05D008944 5.5e-74 282.0 323 49.5
SMO141G0200 Selaginella moellendorffii HOM05D006935 ORTHO05D008944 7.9e-73 278.1 182 73.1
EL10Ac5g10761 Beta vulgaris HOM05D006935 ORTHO05D008944 8.5e-67 258.1 219 62.1
Prupe.5G175000 Prunus persica HOM05D006935 ORTHO05D008944 5.9e-60 235.3 304 47.4
Hma1.2p1_0176F.1_g077560 Hydrangea macrophylla HOM05D006935 ORTHO05D008944 1.9e-58 230.3 190 64.7
Cre06.g272300 Chlamydomonas reinhardtii HOM05D006935 ORTHO05D008944 3.6e-57 226.1 290 47.6
Sed0005822 Sechium edule HOM05D006935 ORTHO05D008944 6.7e-56 221.9 197 61.9
Actinidia20183 Actinidia chinensis HOM05D006935 ORTHO05D008944 1.7e-46 190.7 117 79.5
arahy.Tifrunner.gnm1.ann1.0F4FSZ Arachis hypogaea HOM05D006935 ORTHO05D008944 1.3e-43 181.0 113 75.2
arahy.Tifrunner.gnm1.ann1.209TGD Arachis hypogaea HOM05D006935 ORTHO05D008944 1.7e-43 180.6 115 73.9
Psat4g057640 Pisum sativum HOM05D006935 ORTHO05D008944 8.0e-41 171.8 232 42.7
Lj5C123T7 Lonicera japonica HOM05D006935 ORTHO05D008944 1.0e-40 171.4 111 70.3
MD06G1175700 Malus domestica HOM05D006935 ORTHO05D008944 1.8e-32 144.1 221 40.3
Lj5C123T8 Lonicera japonica HOM05D006935 ORTHO05D008944 1.7e-27 127.5 75 77.3
PRCOL_00001554 Prasinoderma coloniale HOM05D006935 ORTHO05D008944 4.4e-23 112.8 233 36.5
Actinidia01759 Actinidia chinensis HOM05D006935 ORTHO05D008944 1.4e-16 91.3 63 73.0
MCO16G270 Micromonas commoda HOM05D006935 ORTHO05D008944 1.4e-16 91.3 226 31.9
Cre13.g564000 Chlamydomonas reinhardtii HOM05D006820 ORTHO05D008526 1.1e-08 65.1 207 30.4
Hund09427 Selenicereus undatus HOM05D006935 ORTHO05D008944 1.4e-08 64.7 43 69.8
Nn4g24775 Nelumbo nucifera HOM05D006935 ORTHO05D008944 1.2e-07 61.6 33 75.8


User provided reference genes

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