Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT5G62370 Arabidopsis thaliana HOM05D003975 ORTHO05D009762 0.0e+00 1312.4 983 100.0
AL8G39200 Arabidopsis lyrata HOM05D003975 ORTHO05D009762 0.0e+00 1123.6 983 83.9
Carub.0008s2305 Capsella rubella HOM05D003975 ORTHO05D009762 0.0e+00 1122.8 983 86.7
Thhalv10003595m.g Eutrema salsugineum HOM05D003975 ORTHO05D009762 0.0e+00 1077.8 984 84.0
CARHR276150 Cardamine hirsuta HOM05D003975 ORTHO05D009762 0.0e+00 1075.1 985 85.8
Sp2g25540 Schrenkiella parvula HOM05D003975 ORTHO05D009762 1.2e-290 1003.4 983 76.3
A01p18130 Brassica napus HOM05D003975 ORTHO05D009762 8.8e-270 934.1 895 80.9
BraA01t01768Z Brassica rapa HOM05D003975 ORTHO05D009762 8.8e-270 934.1 895 80.9
BolC1t02243H Brassica oleracea HOM05D003975 ORTHO05D009762 1.0e-265 920.6 895 80.2
C01p23090 Brassica napus HOM05D003975 ORTHO05D009762 2.6e-229 799.7 895 75.2
Aa31LG11G1250 Aethionema arabicum HOM05D003975 ORTHO05D009762 1.7e-143 514.6 988 52.7
BcaNung03569 Brassica carinata HOM05D003975 ORTHO05D009762 4.0e-137 493.4 541 78.0
BcaNung03570 Brassica carinata HOM05D003975 ORTHO05D009762 3.9e-108 397.1 289 70.2
THA.LOC104821407 Tarenaya hassleriana HOM05D003975 ORTHO05D009762 3.0e-92 344.4 523 52.0
Sabra04G0136000 Salix brachista HOM05D003975 ORTHO05D009762 1.1e-83 315.8 531 43.7
Atru.chr1.696 Acer truncatum HOM05D003975 ORTHO05D009762 6.6e-76 290.0 800 50.9
Potri.004G200900 Populus trichocarpa HOM05D003975 ORTHO05D009762 1.8e-73 282.0 538 37.0
Sabra15G0053100 Salix brachista HOM05D003975 ORTHO05D009762 1.7e-71 275.4 566 34.3
Sabra15G0054000 Salix brachista HOM05D003975 ORTHO05D009762 1.2e-69 269.2 530 35.1
Sabra09G0126700 Salix brachista HOM05D003975 ORTHO05D009762 1.5e-67 262.3 528 34.5
Ciclev10004237m.g Citrus clementina HOM05D003975 ORTHO05D009762 1.6e-66 258.8 560 41.8
Thecc.03G157100 Theobroma cacao HOM05D003975 ORTHO05D009762 9.0e-65 253.1 522 41.0
CANSAT11G0896 Cannabis sativa HOM05D003975 ORTHO05D009762 1.4e-62 245.7 544 43.6
Cfa008191 Carpinus fangiana HOM05D003975 ORTHO05D009762 1.4e-62 245.7 528 42.8
Haze_13863 Corylus avellana HOM05D003975 ORTHO05D009762 1.9e-62 245.4 528 40.7
Sabra15G0045800 Salix brachista HOM05D003975 ORTHO05D009762 1.6e-58 232.3 525 33.1
Sabra15G0031500 Salix brachista HOM05D003975 ORTHO05D009762 2.8e-58 231.5 530 33.0
QL09p019427 Quercus lobata HOM05D003975 ORTHO05D009762 1.1e-57 229.6 515 39.8
TWI39G0436 Tripterygium wilfordii HOM05D003975 ORTHO05D009762 9.0e-57 226.5 519 41.4
Sabra15G0052100 Salix brachista HOM05D003975 ORTHO05D009762 1.5e-56 225.7 525 36.4
Duzib205G1466 Durio zibethinus HOM05D003975 ORTHO05D009762 1.3e-55 222.6 537 41.9
Manes.15G055100 Manihot esculenta HOM05D003975 ORTHO05D009762 3.2e-54 218.0 530 37.4
Eucgr.D00222 Eucalyptus grandis HOM05D003975 ORTHO05D009762 2.7e-53 214.9 801 47.8
MELO3C006816.2 Cucumis melo HOM05D003975 ORTHO05D009762 1.0e-52 213.0 509 42.6
Gorai.003G114200 Gossypium raimondii HOM05D003975 ORTHO05D009762 3.1e-49 201.4 507 41.6
CAN.G48.19 Capsicum annuum HOM05D003975 ORTHO05D009762 6.9e-49 200.3 834 46.8
Gohir.D03G107900 Gossypium hirsutum HOM05D003975 ORTHO05D009762 6.9e-49 200.3 507 41.6
SGA_v2.0_scaffold2G01188 Striga asiatica HOM05D003975 ORTHO05D009762 3.4e-48 198.0 506 40.9
HanXRQChr05g0142511 Helianthus annuus HOM05D003975 ORTHO05D009762 6.5e-47 193.7 558 36.9
Dinv28563 Davidia involucrata HOM05D003975 ORTHO05D009762 1.4e-46 192.6 823 47.1
Lsat_1_v5_gn_8_8880 Lactuca sativa HOM05D003975 ORTHO05D009762 1.4e-46 192.6 522 40.8
CiPaw.03G094900 Carya illinoinensis HOM05D003975 ORTHO05D009762 7.2e-46 190.3 516 40.1
Sabra15G0044600 Salix brachista HOM05D003975 ORTHO05D009762 6.1e-45 187.2 705 26.8
Rhsim09G0192100 Rhododendron simsii HOM05D000201 ORTHO05D000375 6.7e-44 183.7 878 45.1
ECA233G1567 Erigeron canadensis HOM05D003975 ORTHO05D009762 8.8e-44 183.3 772 42.1
Sed0001623 Sechium edule HOM05D003975 ORTHO05D009762 1.1e-43 183.0 517 40.6
Atru.chr1.699 Acer truncatum HOM05D003975 ORTHO05D009762 2.0e-43 182.2 362 46.7
BcaC04g23418 Brassica carinata HOM05D003975 ORTHO05D009762 7.4e-43 180.3 109 76.1
C09p08550 Brassica napus HOM05D003975 ORTHO05D009762 7.4e-43 180.3 109 76.1
BolC9t53764H Brassica oleracea HOM05D003975 ORTHO05D009762 7.4e-43 180.3 109 76.1
Sabra15G0048500 Salix brachista HOM05D003975 ORTHO05D009762 1.3e-42 179.5 700 25.0
COL.COLO4_14135 Corchorus olitorius HOM05D003975 ORTHO05D009762 1.4e-41 176.0 485 40.8
Sabra15G0046400 Salix brachista HOM05D003975 ORTHO05D009762 1.4e-41 176.0 282 35.1
Sabra15G0060200 Salix brachista HOM05D003975 ORTHO05D009762 4.1e-41 174.5 735 25.7
DCAR_029158 Daucus carota HOM05D003975 ORTHO05D009762 5.3e-41 174.1 493 40.0
QL05p001270 Quercus lobata HOM05D003975 ORTHO05D009762 1.5e-40 172.6 554 27.1
MSTRG.8816 Avicennia marina HOM05D003975 ORTHO05D009762 2.6e-40 171.8 279 37.6
Cc00_g07030 Coffea canephora HOM05D003975 ORTHO05D009762 5.9e-40 170.6 525 38.3
ClCG02G008790 Citrullus lanatus HOM05D003975 ORTHO05D008071 4.7e-37 161.0 213 39.9
Nitab4.5_0002149g0030 Nicotiana tabacum HOM05D003975 ORTHO05D009762 5.2e-36 157.5 544 24.8
vmacro09901 Vaccinium macrocarpon HOM05D003975 ORTHO05D009762 6.7e-36 157.1 529 36.1
Lj8C41T2 Lonicera japonica HOM05D003975 ORTHO05D009762 1.5e-35 156.0 522 37.0
Migut.F00464 Erythranthe guttata HOM05D003975 ORTHO05D009762 3.3e-35 154.8 528 38.1
GSVIVG01018516001 Vitis vinifera HOM05D003975 ORTHO05D009762 4.4e-35 154.5 634 53.5
A09p07640 Brassica napus HOM05D003975 ORTHO05D009762 4.1e-33 147.9 103 68.9
TAR375G0346 Trochodendron aralioides HOM05D003975 ORTHO05D009762 3.6e-29 134.8 170 44.1
CsaV3_3G016180 Cucumis sativus L. HOM05D003975 ORTHO05D009762 4.5e-24 117.9 390 40.8
Aqoxy6G00092 Aquilegia oxysepala HOM05D003975 ORTHO05D009762 1.1e-22 113.2 185 35.1
PGR142G2422 Punica granatum HOM05D003975 ORTHO05D009762 9.4e-22 110.2 147 42.9
CSS0048267 Camellia sinensis var. sinensis HOM05D003975 ORTHO05D009762 6.1e-21 107.5 142 38.7
Nitab4.5_0009543g0010 Nicotiana tabacum HOM05D003975 ORTHO05D009762 1.0e-20 106.7 204 32.4
CSS0004960 Camellia sinensis var. sinensis HOM05D003975 ORTHO05D009762 1.4e-20 106.3 141 38.3
Nitab4.5_0002816g0010 Nicotiana tabacum HOM05D003975 ORTHO05D009762 3.0e-20 105.1 201 32.3
Gohir.A03G058201 Gossypium hirsutum HOM05D003975 ORTHO05D009762 9.8e-19 100.1 635 49.4
Sopen03g023950 Solanum pennellii HOM05D003975 ORTHO05D009762 4.1e-17 94.7 152 33.6
Solyc03g093150.3 Solanum lycopersicum HOM05D003975 ORTHO05D009762 5.4e-17 94.4 152 33.6
MBI04_g11438_MAGBIO Magnolia biondii HOM05D003975 ORTHO05D009762 2.0e-16 92.4 155 34.8
HPP92_003270 Vanilla planifolia HOM05D003975 ORTHO05D009762 7.7e-16 90.5 244 29.1
PGSC0003DMG402014825 Solanum tuberosum HOM05D003975 ORTHO05D009762 1.3e-15 89.7 149 33.6
ATR0743G137 Amborella trichopoda HOM05D003975 ORTHO05D009762 2.2e-15 89.0 152 33.6
Nitab4.5_0002556g0070 Nicotiana tabacum HOM05D003975 ORTHO05D009762 2.5e-14 85.5 137 38.7
Peaxi162Scf00241g00015 Petunia axillaris HOM05D003975 ORTHO05D009762 3.2e-14 85.1 135 36.3
ATR0743G010 Amborella trichopoda HOM05D003975 ORTHO05D009762 4.2e-14 84.7 152 31.6
BcaNung01400 Brassica carinata HOM05D003975 ORTHO05D009762 1.2e-11 76.6 82 45.1
SMO196G0165 Selaginella moellendorffii HOM05D005973 ORTHO05D007285 7.5e-11 73.9 165 27.9
Oeu023215.2 Olea europaea HOM05D003975 ORTHO05D009762 1.2e-08 66.6 123 35.0
Potri.001G154901 Populus trichocarpa HOM05D006400 ORTHO05D008039 2.0e-08 65.9 103 31.1
Sabra01G0124300 Salix brachista HOM05D006400 ORTHO05D008039 1.0e-07 63.5 103 30.1
Sabra01G0124400 Salix brachista HOM05D006400 ORTHO05D008039 1.0e-07 63.5 103 30.1
Sabra01G0124500 Salix brachista HOM05D006400 ORTHO05D008039 1.0e-07 63.5 103 30.1
CSS0026764 Camellia sinensis var. sinensis HOM05D003975 ORTHO05D009762 2.3e-07 62.4 67 46.3
Nn1g01091 Nelumbo nucifera HOM05D003975 ORTHO05D009762 2.3e-07 62.4 104 37.5
Sp2g28660 Schrenkiella parvula HOM05D003210 ORTHO05D000001 2.9e-07 62.0 166 26.5
Lj6C59T5 Lonicera japonica HOM05D008684 ORTHO05D010796 5.0e-07 61.2 127 29.1
QL03p000909 Quercus lobata HOM05D005622 ORTHO05D002854 5.0e-07 61.2 255 23.9
Phvul.011G001300 Phaseolus vulgaris HOM05D006400 ORTHO05D008039 6.6e-07 60.8 122 29.5
Zm00001eb074990 Zea mays HOM05D051871 ORTHO05D014237 1.5e-06 59.7 186 27.4
Cfa002200 Carpinus fangiana HOM05D005973 ORTHO05D007285 2.5e-06 58.9 158 24.7
QL03p001266 Quercus lobata HOM05D005622 ORTHO05D002854 2.5e-06 58.9 243 24.3
TPR.G14625 Trifolium pratense HOM05D004783 ORTHO05D005581 3.3e-06 58.5 141 36.2
Hma1.2p1_0057F.1_g032040 Hydrangea macrophylla HOM05D004783 ORTHO05D005581 9.5e-06 57.0 203 24.6


User provided reference genes

Program Settings