Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT5G61530 Arabidopsis thaliana HOM05D002866 ORTHO05D008706 4.4e-153 544.7 287 100.0
AL8G38230 Arabidopsis lyrata HOM05D002866 ORTHO05D008706 6.3e-144 514.2 277 97.5
Thhalv10005440m.g Eutrema salsugineum HOM05D002866 ORTHO05D008706 1.0e-138 496.9 277 92.8
BraA03t13839Z Brassica rapa HOM05D002866 ORTHO05D008706 8.9e-138 493.8 277 92.1
A03p47120 Brassica napus HOM05D002866 ORTHO05D008929 2.6e-137 492.3 277 92.1
Carub.0008s2222 Capsella rubella HOM05D002866 ORTHO05D008706 2.6e-137 492.3 277 92.8
C07p45230 Brassica napus HOM05D002866 ORTHO05D008929 3.4e-137 491.9 277 91.7
BcaC04g23445 Brassica carinata HOM05D002866 ORTHO05D008706 7.5e-137 490.7 277 93.1
A09p07320 Brassica napus HOM05D002866 ORTHO05D008706 7.5e-137 490.7 277 92.8
CARHR275300 Cardamine hirsuta HOM05D002866 ORTHO05D008706 7.5e-137 490.7 277 92.8
Sp2g24730 Schrenkiella parvula HOM05D002866 ORTHO05D008706 7.5e-137 490.7 277 92.4
BcaNung01432 Brassica carinata HOM05D002866 ORTHO05D008706 2.2e-136 489.2 277 92.4
C09p08260 Brassica napus HOM05D002866 ORTHO05D008706 3.7e-136 488.4 277 92.4
BolC9t53736H Brassica oleracea HOM05D002866 ORTHO05D008706 3.7e-136 488.4 277 92.4
BraA09t36387Z Brassica rapa HOM05D002866 ORTHO05D008706 3.7e-136 488.4 275 93.1
BolC7t45046H Brassica oleracea HOM05D002866 ORTHO05D008929 2.4e-135 485.7 282 90.1
Aa31LG11G1890 Aethionema arabicum HOM05D002866 ORTHO05D008706 2.2e-128 462.6 295 82.7
THA.LOC104819416 Tarenaya hassleriana HOM05D002866 ORTHO05D008706 1.1e-124 450.3 277 84.8
Cpa.g.sc13.273 Carica papaya HOM05D002866 ORTHO05D008706 5.4e-119 431.4 277 79.1
COL.COLO4_14065 Corchorus olitorius HOM05D002866 ORTHO05D008706 7.0e-119 431.0 277 80.9
Duzib205G1859 Durio zibethinus HOM05D002866 ORTHO05D008706 4.6e-118 428.3 277 80.9
Gohir.D12G199800 Gossypium hirsutum HOM05D002866 ORTHO05D008706 1.7e-117 426.4 277 79.8
Gohir.A12G197200 Gossypium hirsutum HOM05D002866 ORTHO05D008706 6.6e-117 424.5 277 79.1
Thecc.03G150500 Theobroma cacao HOM05D002866 ORTHO05D008706 4.3e-116 421.8 277 79.8
MD07G1250400 Malus domestica HOM05D002866 ORTHO05D008706 2.8e-115 419.1 279 77.4
ClCG07G016890 Citrullus lanatus HOM05D002866 ORTHO05D008706 3.6e-115 418.7 278 77.7
CiPaw.07G185900 Carya illinoinensis HOM05D002866 ORTHO05D008706 8.1e-115 417.5 280 77.9
Atru.chr1.857 Acer truncatum HOM05D002866 ORTHO05D008706 3.1e-114 415.6 277 79.1
QL09p028565 Quercus lobata HOM05D002866 ORTHO05D008706 3.1e-114 415.6 277 77.3
MELO3C017654.2 Cucumis melo HOM05D002866 ORTHO05D008706 6.8e-114 414.5 277 76.5
CsaV3_4G004120 Cucumis sativus L. HOM05D002866 ORTHO05D008706 8.9e-114 414.1 277 76.5
RcHm_v2.0_Chr1g0373901 Rosa chinensis HOM05D002866 ORTHO05D008706 8.9e-114 414.1 277 76.9
Potri.004G233400 Populus trichocarpa HOM05D002866 ORTHO05D008706 1.2e-113 413.7 286 75.5
CANSAT56G0863 Cannabis sativa HOM05D002866 ORTHO05D008706 2.0e-113 412.9 277 78.0
Actinidia13600 Actinidia chinensis HOM05D000164 ORTHO05D000096 5.8e-113 411.4 281 75.4
Gorai.008G215000 Gossypium raimondii HOM05D002866 ORTHO05D008706 5.8e-113 411.4 305 72.5
Ciclev10005197m.g Citrus clementina HOM05D002866 ORTHO05D008706 6.4e-112 407.9 277 76.9
Lj3g0011743 Lotus japonicus HOM05D002866 ORTHO05D008706 1.4e-111 406.8 277 75.8
Sed0026429 Sechium edule HOM05D002866 ORTHO05D008706 7.1e-111 404.4 277 75.1
Cfa013555 Carpinus fangiana HOM05D002866 ORTHO05D008706 1.2e-110 403.7 277 74.7
Ca_19791_v3 Cicer arietinum L. HOM05D002866 ORTHO05D008706 1.2e-110 403.7 277 74.4
Oeu021695.1 Olea europaea HOM05D002866 ORTHO05D008706 1.6e-110 403.3 277 74.7
HanXRQChr05g0139511 Helianthus annuus HOM05D002866 ORTHO05D008706 2.1e-110 402.9 277 74.7
Glyma.09G001400 Glycine max HOM05D002866 ORTHO05D008706 2.7e-110 402.5 277 74.0
MD01G1178200 Malus domestica HOM05D002866 ORTHO05D008706 6.0e-110 401.4 268 78.4
CSS0049284 Camellia sinensis var. sinensis HOM05D002866 ORTHO05D008706 7.8e-110 401.0 277 74.7
Glyma.12G241300 Glycine max HOM05D002866 ORTHO05D008706 1.0e-109 400.6 281 72.6
Sabra01G0178500 Salix brachista HOM05D002866 ORTHO05D008706 1.0e-109 400.6 276 76.1
CSS0019630 Camellia sinensis var. sinensis HOM05D002866 ORTHO05D008706 1.3e-109 400.2 277 74.4
FvH4_7g27080 Fragaria vesca HOM05D002866 ORTHO05D008706 1.7e-109 399.8 277 72.9
Eucgr.K00134 Eucalyptus grandis HOM05D002866 ORTHO05D008706 5.1e-109 398.3 277 74.4
CiPaw.08G040800 Carya illinoinensis HOM05D002866 ORTHO05D008706 1.1e-108 397.1 278 75.5
FAN06G0893 Fragaria x ananassa HOM05D002866 ORTHO05D008706 1.1e-108 397.1 273 73.3
FAN10G3812 Fragaria x ananassa HOM05D002866 ORTHO05D008706 1.1e-108 397.1 273 73.3
TPR.G4977 Trifolium pratense HOM05D002866 ORTHO05D008706 1.1e-108 397.1 277 73.6
VMungo1127G0600 Vigna mungo HOM05D002866 ORTHO05D008706 1.1e-108 397.1 277 72.6
Haze_22176 Corylus avellana HOM05D002866 ORTHO05D008706 1.5e-108 396.7 273 73.6
Rhsim03G0163000 Rhododendron simsii HOM05D002866 ORTHO05D008706 3.3e-108 395.6 278 74.8
Psat7g229240 Pisum sativum HOM05D002866 ORTHO05D008706 4.3e-108 395.2 277 72.9
Dinv16857 Davidia involucrata HOM05D002866 ORTHO05D000096 5.6e-108 394.8 277 75.5
Nitab4.5_0002346g0030 Nicotiana tabacum HOM05D002866 ORTHO05D008706 5.6e-108 394.8 275 73.8
Peaxi162Scf00271g00837 Petunia axillaris HOM05D002866 ORTHO05D008706 5.6e-108 394.8 277 72.6
TWI39G0340 Tripterygium wilfordii HOM05D002866 ORTHO05D008706 9.5e-108 394.0 277 72.6
Medtr4g029530 Medicago truncatula HOM05D002866 ORTHO05D008706 1.2e-107 393.7 277 72.9
Dinv06581 Davidia involucrata HOM05D002866 ORTHO05D008706 2.1e-107 392.9 281 75.1
Solyc03g093430.3 Solanum lycopersicum HOM05D002866 ORTHO05D008706 2.1e-107 392.9 277 72.6
Sopen03g024260 Solanum pennellii HOM05D002866 ORTHO05D008706 2.1e-107 392.9 277 72.6
TAR629G0107 Trochodendron aralioides HOM05D002866 ORTHO05D008706 2.8e-107 392.5 281 74.0
PGSC0003DMG400018852 Solanum tuberosum HOM05D002866 ORTHO05D008706 4.7e-107 391.7 277 72.2
MSTRG.135 Avicennia marina HOM05D002866 ORTHO05D008706 8.1e-107 391.0 277 72.6
Migut.F00510 Erythranthe guttata HOM05D002866 ORTHO05D008706 1.1e-106 390.6 277 72.2
Lj1A977T67 Lonicera japonica HOM05D002866 ORTHO05D008706 1.1e-106 390.6 307 68.1
Lalb_Chr01g0008171 Lupinus albus HOM05D002866 ORTHO05D008706 5.2e-106 388.3 277 70.8
TAR636G1476 Trochodendron aralioides HOM05D002866 ORTHO05D008706 6.8e-106 387.9 281 72.2
Lsat_1_v5_gn_8_9940 Lactuca sativa HOM05D002866 ORTHO05D008706 2.0e-105 386.3 277 71.1
arahy.Tifrunner.gnm1.ann1.E5894Z Arachis hypogaea HOM05D002866 ORTHO05D008706 3.4e-105 385.6 306 66.7
arahy.Tifrunner.gnm1.ann1.J95VX3 Arachis hypogaea HOM05D002866 ORTHO05D008706 3.4e-105 385.6 300 67.7
CAN.G485.11 Capsicum annuum HOM05D002866 ORTHO05D008706 5.8e-105 384.8 278 71.2
Manes.06G132500 Manihot esculenta HOM05D002866 ORTHO05D008706 7.6e-105 384.4 277 72.9
vmacro22347 Vaccinium macrocarpon HOM05D002866 ORTHO05D008706 1.7e-104 383.3 273 74.0
Cc02_g04580 Coffea canephora HOM05D002866 ORTHO05D008706 6.4e-104 381.3 271 72.0
Lalb_Chr03g0033851 Lupinus albus HOM05D002866 ORTHO05D008706 4.2e-103 378.6 277 69.3
PGR142G0955 Punica granatum HOM05D002866 ORTHO05D008706 2.1e-102 376.3 279 71.3
Ah.07g207580 Amaranthus hybridus HOM05D002866 ORTHO05D008706 2.7e-102 375.9 278 69.1
unitig_0.g267 Utricularia gibba HOM05D002866 ORTHO05D008706 3.5e-102 375.6 277 68.2
Nitab4.5_0001267g0040 Nicotiana tabacum HOM05D002866 ORTHO05D008706 4.6e-102 375.2 277 70.0
Nn6g33864 Nelumbo nucifera HOM05D002866 ORTHO05D008706 1.1e-100 370.5 281 68.7
EL10Ac3g05867 Beta vulgaris HOM05D002866 ORTHO05D008706 7.3e-100 367.9 277 68.6
Aqoxy3G02809 Aquilegia oxysepala HOM05D002866 ORTHO05D008706 2.1e-99 366.3 282 69.5
FAN06G0035 Fragaria x ananassa HOM05D002866 ORTHO05D008706 2.1e-99 366.3 258 71.3
SGA_v2.0_scaffold60G20804 Striga asiatica HOM05D006112 ORTHO05D000096 2.1e-99 366.3 303 63.7
FAN01G3021 Fragaria x ananassa HOM05D002866 ORTHO05D008706 6.2e-99 364.8 294 65.3
MBI04_g34101_MAGBIO Magnolia biondii HOM05D002866 ORTHO05D008706 8.1e-99 364.4 281 68.0
Eucgr.A02912 Eucalyptus grandis HOM05D002866 ORTHO05D008706 9.9e-97 357.5 277 65.7
Prupe.2G274000 Prunus persica HOM05D002866 ORTHO05D008706 3.2e-95 352.4 222 80.6
PSO063G2361 Papaver somniferum HOM05D002866 ORTHO05D008706 9.3e-95 350.9 284 65.1
FAN03G0071 Fragaria x ananassa HOM05D002866 ORTHO05D008706 1.2e-94 350.5 273 68.1
CDE02G3129 Ceratophyllum demersum HOM05D002866 ORTHO05D008706 1.1e-92 344.0 281 63.7
Hund27168 Selenicereus undatus HOM05D002866 ORTHO05D008706 1.4e-90 337.0 353 53.3
Os07g0486500 Oryza sativa ssp. japonica HOM05D002866 ORTHO05D008706 2.6e-89 332.8 282 61.7
ATR0057G110 Amborella trichopoda HOM05D002866 ORTHO05D008706 4.6e-86 322.0 299 58.9
HPP92_007440 Vanilla planifolia HOM05D002866 ORTHO05D008706 6.9e-82 308.1 287 57.5
AUR62015444 Chenopodium quinoa HOM05D002866 ORTHO05D008706 2.2e-80 303.1 273 61.2
AUR62002232 Chenopodium quinoa HOM05D002866 ORTHO05D008706 1.6e-78 297.0 273 59.0
AL6G41360 Arabidopsis lyrata HOM05D002866 ORTHO05D008706 4.3e-76 288.9 158 93.7
AL4G20970 Arabidopsis lyrata HOM05D002866 ORTHO05D008706 1.1e-74 284.3 158 93.0
AL7G45270 Arabidopsis lyrata HOM05D002866 ORTHO05D008706 1.2e-73 280.8 158 91.8
Zm00001eb321610 Zea mays HOM05D002866 ORTHO05D008706 1.0e-69 267.7 286 53.5
Zm00001eb105130 Zea mays HOM05D002866 ORTHO05D008706 1.9e-68 263.5 245 56.3
AL9U10640 Arabidopsis lyrata HOM05D002866 ORTHO05D008706 2.7e-62 243.0 158 82.3
AagrBONN_evm.TU.Sc2ySwM_368.2292 Anthoceros agrestis HOM05D002866 ORTHO05D008706 2.5e-55 219.9 293 43.3
Mapoly0101s0019 Marchantia polymorpha HOM05D002866 ORTHO05D008706 2.0e-49 200.3 306 38.9
GSVIVG01032279001 Vitis vinifera HOM05D002866 ORTHO05D008706 8.0e-46 188.3 148 68.2
SEGI_37372 Sequoiadendron giganteum HOM05D002866 ORTHO05D008706 8.5e-40 168.3 140 57.1
CBR_g12377 Chara braunii HOM05D002866 ORTHO05D008706 1.2e-38 164.5 230 44.8
GSVIVG01032275001 Vitis vinifera HOM05D002866 ORTHO05D008706 1.4e-37 161.0 124 67.7
BcaNung07329 Brassica carinata HOM05D002866 ORTHO05D008706 6.8e-37 158.7 86 95.3
GSVIVG01005702001 Vitis vinifera HOM05D002866 ORTHO05D008706 6.3e-35 152.1 126 65.1
Oeu017777.1 Olea europaea HOM05D002866 ORTHO05D008706 2.7e-30 136.7 108 65.7
GSVIVG01032273001 Vitis vinifera HOM05D002866 ORTHO05D008706 1.7e-24 117.5 90 65.6
Cfa024407 Carpinus fangiana HOM05D006418 ORTHO05D008063 9.2e-10 68.6 159 32.1
GSVIVG01006058001 Vitis vinifera HOM05D002866 ORTHO05D441252 3.0e-08 63.5 39 79.5
Lj9A174G23 Lonicera japonica HOM05D002866 ORTHO05D234197 3.9e-08 63.2 115 37.4
GSVIVG01005989001 Vitis vinifera HOM05D002866 ORTHO05D440186 6.6e-08 62.4 39 76.9


User provided reference genes

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