Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT5G61450 Arabidopsis thaliana HOM05D004234 ORTHO05D004670 5.4e-243 844.0 448 100.0
AL8G38140 Arabidopsis lyrata HOM05D004234 ORTHO05D004670 1.8e-222 775.8 451 93.3
Carub.0008s2213 Capsella rubella HOM05D004234 ORTHO05D004670 6.1e-218 760.8 450 91.8
Thhalv10004229m.g Eutrema salsugineum HOM05D004234 ORTHO05D004670 2.5e-211 738.8 453 87.6
Sp2g24650 Schrenkiella parvula HOM05D004234 ORTHO05D004670 5.9e-205 717.6 447 86.4
C07p45120 Brassica napus HOM05D004234 ORTHO05D004670 2.8e-199 698.7 448 84.2
BraA03t13827Z Brassica rapa HOM05D004234 ORTHO05D004670 1.4e-198 696.4 450 83.3
BcaC06g33234 Brassica carinata HOM05D004234 ORTHO05D004670 5.3e-198 694.5 448 83.7
A03p47040 Brassica napus HOM05D004234 ORTHO05D004670 5.3e-198 694.5 450 83.1
BolC7t45034H Brassica oleracea HOM05D004234 ORTHO05D004670 2.0e-197 692.6 449 83.7
BcaC06g33149 Brassica carinata HOM05D004234 ORTHO05D004670 4.7e-186 654.8 447 79.6
Aa31LG11G1950 Aethionema arabicum HOM05D004234 ORTHO05D004670 4.4e-168 595.1 446 73.3
QL09p005405 Quercus lobata HOM05D004234 ORTHO05D004670 1.1e-153 547.4 431 68.4
Hma1.2p1_0432F.1_g151850 Hydrangea macrophylla HOM05D004234 ORTHO05D004670 6.8e-153 544.7 443 67.9
Potri.001G125700 Populus trichocarpa HOM05D004234 ORTHO05D004670 8.9e-153 544.3 426 70.7
COL.COLO4_14105 Corchorus olitorius HOM05D004234 ORTHO05D004670 1.5e-152 543.5 417 71.9
Medtr4g036835 Medicago truncatula HOM05D004234 ORTHO05D004670 7.5e-152 541.2 426 69.0
PGR042G3222 Punica granatum HOM05D004234 ORTHO05D004670 2.9e-151 539.3 442 67.6
CSS0018772 Camellia sinensis var. sinensis HOM05D004234 ORTHO05D004670 1.4e-150 537.0 418 69.9
Dinv06568 Davidia involucrata HOM05D004234 ORTHO05D004670 1.9e-150 536.6 415 69.9
Gohir.D03G106600 Gossypium hirsutum HOM05D004234 ORTHO05D004670 1.9e-150 536.6 418 69.9
ECA233G5771 Erigeron canadensis HOM05D004234 ORTHO05D004670 4.1e-150 535.4 407 71.3
GSVIVG01014047001 Vitis vinifera HOM05D004234 ORTHO05D004670 5.4e-150 535.0 442 65.4
Gohir.A03G059300 Gossypium hirsutum HOM05D004234 ORTHO05D004670 7.1e-150 534.6 426 69.0
Manes.06G133800 Manihot esculenta HOM05D004234 ORTHO05D004670 1.6e-149 533.5 431 69.4
Nn6g33942 Nelumbo nucifera HOM05D004234 ORTHO05D004670 1.6e-149 533.5 439 67.2
Thecc.03G153900 Theobroma cacao HOM05D004234 ORTHO05D004670 2.1e-149 533.1 432 69.0
Potri.003G108000 Populus trichocarpa HOM05D004234 ORTHO05D004670 4.6e-149 531.9 430 69.3
Oeu028187.2 Olea europaea HOM05D004234 ORTHO05D004670 7.8e-149 531.2 414 69.1
Sabra03G0074900 Salix brachista HOM05D004234 ORTHO05D004670 7.8e-149 531.2 421 70.8
RcHm_v2.0_Chr1g0331961 Rosa chinensis HOM05D004234 ORTHO05D004670 1.3e-148 530.4 435 67.6
TWI39G0359 Tripterygium wilfordii HOM05D004234 ORTHO05D004670 1.3e-148 530.4 433 67.9
FAN10G4258 Fragaria x ananassa HOM05D004234 ORTHO05D004670 1.7e-148 530.0 401 73.1
FvH4_7g05310 Fragaria vesca HOM05D004234 ORTHO05D004670 2.3e-148 529.6 402 72.6
FAN03G3162 Fragaria x ananassa HOM05D004234 ORTHO05D004670 2.3e-148 529.6 402 72.6
Actinidia31776 Actinidia chinensis HOM05D004234 ORTHO05D004670 3.9e-148 528.9 409 69.9
Psat7g159560 Pisum sativum HOM05D004234 ORTHO05D004670 5.1e-148 528.5 431 68.9
arahy.Tifrunner.gnm1.ann1.WXBJ4D Arachis hypogaea HOM05D004234 ORTHO05D004670 6.6e-148 528.1 415 69.4
HanXRQChr05g0142531 Helianthus annuus HOM05D004234 ORTHO05D004670 6.6e-148 528.1 403 69.5
MD01G1182200 Malus domestica HOM05D004234 ORTHO05D004670 1.5e-147 526.9 421 69.6
arahy.Tifrunner.gnm1.ann1.11333K Arachis hypogaea HOM05D004234 ORTHO05D004670 1.9e-147 526.6 419 68.7
Sopen03g024080 Solanum pennellii HOM05D004234 ORTHO05D004670 2.5e-147 526.2 416 67.1
Glyma.09G229600 Glycine max HOM05D004234 ORTHO05D004670 5.6e-147 525.0 417 68.6
Lj1A979T78 Lonicera japonica HOM05D004234 ORTHO05D004670 7.3e-147 524.6 407 69.5
MD07G1252500 Malus domestica HOM05D004234 ORTHO05D004670 7.3e-147 524.6 423 69.5
SalBow8G0184 Salvia bowleyana HOM05D004234 ORTHO05D004670 7.3e-147 524.6 401 70.8
SalBow8G4519 Salvia bowleyana HOM05D004234 ORTHO05D004670 7.3e-147 524.6 401 70.8
Lalb_Chr01g0000341 Lupinus albus HOM05D004234 ORTHO05D004670 9.5e-147 524.2 433 65.8
Phvul.011G007500 Phaseolus vulgaris HOM05D004234 ORTHO05D004670 2.1e-146 523.1 416 68.5
Prupe.2G276000 Prunus persica HOM05D004234 ORTHO05D004670 2.1e-146 523.1 420 69.0
Solyc03g093300.3 Solanum lycopersicum HOM05D004234 ORTHO05D004670 2.1e-146 523.1 417 67.1
unitig_46.g18765 Utricularia gibba HOM05D004234 ORTHO05D004670 2.1e-146 523.1 414 69.1
Lj3g0001566 Lotus japonicus HOM05D004234 ORTHO05D004670 3.6e-146 522.3 424 68.6
Gorai.003G113100 Gossypium raimondii HOM05D004234 ORTHO05D004670 6.2e-146 521.5 414 69.1
Sed0010040 Sechium edule HOM05D004234 ORTHO05D004670 8.1e-146 521.2 424 65.8
DCAR_014620 Daucus carota HOM05D004234 ORTHO05D004670 1.4e-145 520.4 423 66.9
Migut.F00484 Erythranthe guttata HOM05D004234 ORTHO05D004670 1.4e-145 520.4 426 67.1
VMungo1127G0923 Vigna mungo HOM05D004234 ORTHO05D004670 1.8e-145 520.0 409 68.5
Actinidia13581 Actinidia chinensis HOM05D004234 ORTHO05D004670 2.4e-145 519.6 423 68.3
Ciclev10004769m.g Citrus clementina HOM05D004234 ORTHO05D004670 2.4e-145 519.6 439 64.7
Gohir.D12G200600 Gossypium hirsutum HOM05D004234 ORTHO05D004670 2.4e-145 519.6 407 68.6
Gorai.008G215700 Gossypium raimondii HOM05D004234 ORTHO05D004670 2.4e-145 519.6 407 68.6
Eucgr.H04780 Eucalyptus grandis HOM05D004234 ORTHO05D004670 6.8e-145 518.1 419 68.3
Duzib084G1335 Durio zibethinus HOM05D004234 ORTHO05D004670 1.2e-144 517.3 418 69.1
Gohir.A12G198000 Gossypium hirsutum HOM05D004234 ORTHO05D004670 1.2e-144 517.3 409 68.5
CsaV3_3G050070 Cucumis sativus L. HOM05D004234 ORTHO05D004670 1.5e-144 516.9 443 65.2
ClCG09G013080 Citrullus lanatus HOM05D004234 ORTHO05D004670 2.0e-144 516.5 429 67.8
PSO238G0034 Papaver somniferum HOM05D004234 ORTHO05D004670 9.9e-144 514.2 425 65.4
Atru.chr1.756 Acer truncatum HOM05D004234 ORTHO05D004670 1.7e-143 513.5 403 67.5
Lsat_1_v5_gn_1_117561 Lactuca sativa HOM05D004234 ORTHO05D004670 4.2e-142 508.8 392 69.4
Sc19g0002070 Simmondsia chinensis HOM05D004234 ORTHO05D004670 7.1e-142 508.1 397 69.8
SGA_v2.0_scaffold2G01218 Striga asiatica HOM05D004234 ORTHO05D004670 7.1e-142 508.1 432 66.0
Peaxi162Scf00241g00030 Petunia axillaris HOM05D004234 ORTHO05D004670 2.1e-141 506.5 425 65.2
Sed0020354 Sechium edule HOM05D004234 ORTHO05D004670 1.7e-140 503.4 412 66.7
Aqoxy1G01638 Aquilegia oxysepala HOM05D004234 ORTHO05D004670 2.3e-140 503.1 438 65.1
Aqoxy5G04150 Aquilegia oxysepala HOM05D004234 ORTHO05D004670 2.3e-140 503.1 438 65.1
ATR0317G048 Amborella trichopoda HOM05D004234 ORTHO05D004670 3.0e-140 502.7 405 67.9
Nitab4.5_0002816g0120 Nicotiana tabacum HOM05D004234 ORTHO05D004670 3.0e-140 502.7 411 66.2
HPP92_020352 Vanilla planifolia HOM05D004234 ORTHO05D004670 3.9e-140 502.3 437 62.9
Cc02_g04370 Coffea canephora HOM05D004234 ORTHO05D004670 5.1e-140 501.9 418 65.6
Os03g0102400 Oryza sativa ssp. japonica HOM05D004234 ORTHO05D004670 2.1e-138 496.5 417 63.8
TAR636G1879 Trochodendron aralioides HOM05D004234 ORTHO05D004670 8.1e-138 494.6 411 67.2
Glyma.12G006700 Glycine max HOM05D004234 ORTHO05D004670 1.4e-137 493.8 421 64.6
MELO3C003311.2 Cucumis melo HOM05D004234 ORTHO05D004670 5.3e-137 491.9 511 57.5
AUR62015488 Chenopodium quinoa HOM05D004234 ORTHO05D004670 9.0e-137 491.1 468 60.3
C07p40880 Brassica napus HOM05D004234 ORTHO05D004670 1.2e-136 490.7 366 74.6
Prupe.2G276100 Prunus persica HOM05D004234 ORTHO05D004670 3.4e-136 489.2 398 64.8
Lsat_1_v5_gn_9_51980 Lactuca sativa HOM05D004234 ORTHO05D004670 5.8e-136 488.4 404 66.1
Os07g0466200 Oryza sativa ssp. japonica HOM05D004234 ORTHO05D004670 6.4e-135 485.0 407 63.9
Zm00001eb404400 Zea mays HOM05D004234 ORTHO05D004670 8.4e-135 484.6 438 61.9
Hund11832 Selenicereus undatus HOM05D004234 ORTHO05D004670 5.4e-134 481.9 423 65.0
BolC7t44614H Brassica oleracea HOM05D004234 ORTHO05D004670 9.3e-134 481.1 366 73.5
Nn1g00980 Nelumbo nucifera HOM05D004234 ORTHO05D004670 6.0e-133 478.4 414 64.0
Rhsim09G0190900 Rhododendron simsii HOM05D004234 ORTHO05D004670 1.1e-131 474.2 529 53.9
Ca_25531_v3 Cicer arietinum L. HOM05D004234 ORTHO05D004670 4.3e-131 472.2 417 63.5
PSO210G3536 Papaver somniferum HOM05D004234 ORTHO05D004670 1.6e-130 470.3 430 60.9
MD07G1252600 Malus domestica HOM05D004234 ORTHO05D004670 6.2e-130 468.4 386 64.5
BcaNung02453 Brassica carinata HOM05D004234 ORTHO05D004670 1.4e-126 457.2 339 74.3
Mapoly0072s0015 Marchantia polymorpha HOM05D004234 ORTHO05D004670 3.2e-126 456.1 487 55.0
Pp3c17_11550 Physcomitrium patens HOM05D004234 ORTHO05D004670 7.1e-126 454.9 398 62.1
FvH4_7g27310 Fragaria vesca HOM05D004234 ORTHO05D004670 7.9e-125 451.4 399 58.6
RcHm_v2.0_Chr1g0374151 Rosa chinensis HOM05D004234 ORTHO05D004670 1.0e-124 451.1 399 57.1
CARHR275210 Cardamine hirsuta HOM05D004234 ORTHO05D004670 1.8e-124 450.3 269 87.7
Pp3c2_13380 Physcomitrium patens HOM05D004234 ORTHO05D004670 1.5e-123 447.2 407 60.9
Pp3c14_12080 Physcomitrium patens HOM05D004234 ORTHO05D004670 9.6e-123 444.5 398 62.3
Ah.07g207720 Amaranthus hybridus HOM05D004234 ORTHO05D004670 6.2e-122 441.8 446 60.1
FAN06G0557 Fragaria x ananassa HOM05D004234 ORTHO05D004670 8.1e-122 441.4 399 58.1
Nitab4.5_0003490g0020 Nicotiana tabacum HOM05D004234 ORTHO05D004670 1.4e-121 440.7 377 63.9
Medtr1g056720 Medicago truncatula HOM05D004234 ORTHO05D004670 2.4e-121 439.9 366 65.6
AagrBONN_evm.TU.Sc2ySwM_117.258 Anthoceros agrestis HOM05D004234 ORTHO05D004670 1.2e-120 437.6 436 58.3
EL10Ac3g05852 Beta vulgaris HOM05D004234 ORTHO05D004670 2.6e-120 436.4 425 59.3
Lsat_1_v5_gn_8_8740 Lactuca sativa HOM05D004234 ORTHO05D004670 3.8e-119 432.6 411 60.1
CAN.G48.41 Capsicum annuum HOM05D004234 ORTHO05D004670 3.3e-115 419.5 394 58.9
SMO357G0012 Selaginella moellendorffii HOM05D004234 ORTHO05D004670 1.4e-113 414.1 409 56.5
Lsat_1_v5_gn_1_117520 Lactuca sativa HOM05D004234 ORTHO05D004670 5.3e-113 412.1 398 59.0
FAN03G0204 Fragaria x ananassa HOM05D004234 ORTHO05D004670 1.2e-112 411.0 411 54.7
AUR62002211 Chenopodium quinoa HOM05D004234 ORTHO05D004670 2.2e-111 406.8 357 65.5
FAN01G2714 Fragaria x ananassa HOM05D004234 ORTHO05D004670 2.9e-111 406.4 402 60.2
Duzib205G0275 Durio zibethinus HOM05D004234 ORTHO05D004670 4.9e-111 405.6 385 62.3
Nitab4.5_0000262g0110 Nicotiana tabacum HOM05D004234 ORTHO05D004670 3.2e-110 402.9 408 58.1
CiPaw.04G059200 Carya illinoinensis HOM05D004234 ORTHO05D004670 1.6e-109 400.6 283 77.0
FAN06G1565 Fragaria x ananassa HOM05D004234 ORTHO05D004670 1.0e-108 397.9 362 58.3
Peaxi162Scf00304g01343 Petunia axillaris HOM05D004234 ORTHO05D004670 8.7e-108 394.8 388 58.2
FAN03G2107 Fragaria x ananassa HOM05D002503 ORTHO05D004670 2.0e-104 383.6 368 56.2
FAN10G3280 Fragaria x ananassa HOM05D002503 ORTHO05D004670 2.6e-104 383.3 367 56.4
CAN.G330.4 Capsicum annuum HOM05D004234 ORTHO05D004670 2.1e-101 373.6 354 57.3
Lj8A43G57 Lonicera japonica HOM05D004234 ORTHO05D004670 1.8e-97 360.5 394 54.8
CBR_g12525 Chara braunii HOM05D004234 ORTHO05D004670 4.1e-89 332.8 581 41.0
FAN10G1071 Fragaria x ananassa HOM05D004234 ORTHO05D004670 4.7e-85 319.3 394 47.7
SMO203G0101 Selaginella moellendorffii HOM05D004234 ORTHO05D004670 1.8e-81 307.4 311 55.6
Sabra01G0096800 Salix brachista HOM05D004234 ORTHO05D004670 5.3e-81 305.8 281 63.3
Solyc06g034180.2 Solanum lycopersicum HOM05D004234 ORTHO05D004670 4.7e-77 292.7 335 51.9
PGSC0003DMG400021593 Solanum tuberosum HOM05D004234 ORTHO05D004670 7.0e-73 278.9 367 46.0
arahy.Tifrunner.gnm1.ann1.EHKS3S Arachis hypogaea HOM05D004234 ORTHO05D004670 7.7e-72 275.4 296 55.7
Lsat_1_v5_gn_1_117540 Lactuca sativa HOM05D004234 ORTHO05D004670 2.1e-61 240.7 283 50.9
Nitab4.5_0000448g0090 Nicotiana tabacum HOM05D004234 ORTHO05D004670 6.1e-61 239.2 291 51.9
Cpa.g.sc4200.1 Carica papaya HOM05D004234 ORTHO05D004670 1.3e-58 231.5 121 92.6
SHI13981 Sapria himalayana HOM05D004234 ORTHO05D004670 1.5e-54 218.0 230 56.1
vmacro09913 Vaccinium macrocarpon HOM05D004234 ORTHO05D004670 4.7e-53 213.0 219 57.5
Cre03.g201000 Chlamydomonas reinhardtii HOM05D004234 ORTHO05D004670 4.3e-46 189.9 322 36.3
Sopen06g015930 Solanum pennellii HOM05D004234 ORTHO05D000001 3.6e-45 186.8 103 85.4
CSS0026342 Camellia sinensis var. sinensis HOM05D004234 ORTHO05D004670 4.1e-41 173.3 101 85.1
arahy.Tifrunner.gnm1.ann1.J8KP6L Arachis hypogaea HOM05D004234 ORTHO05D004670 1.2e-37 161.8 138 67.4
arahy.Tifrunner.gnm1.ann1.AYL6ZU Arachis hypogaea HOM05D004234 ORTHO05D004670 4.0e-36 156.8 156 62.8
Haze_13877 Corylus avellana HOM05D004234 ORTHO05D004670 7.6e-35 152.5 188 54.8
Cpa.g.c29748.2 Carica papaya HOM05D004234 ORTHO05D004670 1.9e-33 147.9 120 68.3
BolC1t03363H Brassica oleracea HOM05D004234 ORTHO05D004670 9.2e-33 145.6 74 94.6
FvH4_2g12100 Fragaria vesca HOM05D004234 ORTHO05D004670 1.7e-26 124.8 97 66.0
arahy.Tifrunner.gnm1.ann1.F7NEP8 Arachis hypogaea HOM05D004234 ORTHO05D004670 2.5e-22 110.9 87 70.1
SEGI_04441 Sequoiadendron giganteum HOM05D004234 ORTHO05D004670 3.6e-21 107.1 82 70.7
SEGI_30601 Sequoiadendron giganteum HOM05D004234 ORTHO05D004670 2.4e-20 104.4 58 86.2
FvH4_c2g00051 Fragaria vesca HOM05D004234 ORTHO05D004670 9.0e-20 102.4 169 46.2
Dinv16843 Davidia involucrata HOM05D004234 ORTHO05D004670 4.9e-18 96.7 56 78.6
SEGI_33806 Sequoiadendron giganteum HOM05D004234 ORTHO05D004670 1.4e-17 95.1 60 73.3
Gorai.011G181500 Gossypium raimondii HOM05D001733 ORTHO05D004670 5.4e-17 93.2 51 84.3
FvH4_3g27272 Fragaria vesca HOM05D004234 ORTHO05D004670 2.1e-16 91.3 162 44.4
Migut.L01142 Erythranthe guttata HOM05D004234 ORTHO05D004670 4.6e-16 90.1 64 67.2
Gorai.009G415200 Gossypium raimondii HOM05D004234 ORTHO05D004670 2.3e-15 87.8 51 82.4
SEGI_09779 Sequoiadendron giganteum HOM05D004234 ORTHO05D004670 3.9e-15 87.0 71 59.2
Lsat_1_v5_gn_5_94641 Lactuca sativa HOM05D004234 ORTHO05D004670 6.6e-15 86.3 59 66.1
Gorai.012G056500 Gossypium raimondii HOM05D004234 ORTHO05D004670 1.1e-14 85.5 51 80.4
Gohir.D04G050932 Gossypium hirsutum HOM05D004234 ORTHO05D004670 7.3e-14 82.8 55 72.7
Actinidia24997 Actinidia chinensis HOM05D004234 ORTHO05D004670 6.2e-13 79.7 60 70.0
Haze_13878 Corylus avellana HOM05D004234 ORTHO05D004670 1.1e-12 79.0 41 90.2
Gohir.D11G243650 Gossypium hirsutum HOM05D001733 ORTHO05D004670 1.8e-12 78.2 51 74.5
FvH4_5g28373 Fragaria vesca HOM05D004234 ORTHO05D004670 4.5e-11 73.6 194 38.1
Cpa.g.sc111.54 Carica papaya HOM05D004234 ORTHO05D004670 2.2e-10 71.2 144 39.6
PRCOL_00000881 Prasinoderma coloniale HOM05D004234 ORTHO05D004670 6.4e-10 69.7 81 51.9
Peaxi162Scf00304g01326 Petunia axillaris HOM05D004234 ORTHO05D004670 2.7e-08 64.3 40 77.5
Rhsim06G0134300 Rhododendron simsii HOM05D000157 ORTHO05D000311 8.7e-07 59.3 36 80.6
Nitab4.5_0003490g0040 Nicotiana tabacum HOM05D004234 ORTHO05D004670 1.9e-06 58.2 30 86.7


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