Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT5G59105 Arabidopsis thaliana HOM05D009997 ORTHO05D011114 2.7e-41 172.2 78 100.0
AL8G35590 Arabidopsis lyrata HOM05D009997 ORTHO05D011114 4.3e-31 138.3 82 78.0
CARHR037560 Cardamine hirsuta HOM05D009157 ORTHO05D011114 4.2e-18 95.1 77 58.4
Thhalv10015910m.g Eutrema salsugineum HOM05D009997 ORTHO05D011114 2.1e-14 82.8 81 55.6
BolC7t42591H Brassica oleracea HOM05D009997 ORTHO05D011114 8.1e-14 80.9 79 50.6
BraA07t29157Z Brassica rapa HOM05D009997 ORTHO05D011114 3.1e-13 79.0 79 50.6
AT1G15757 Arabidopsis thaliana HOM05D009997 ORTHO05D013470 1.5e-12 76.6 83 51.8
AL1G27870 Arabidopsis lyrata HOM05D009997 ORTHO05D013470 3.4e-12 75.5 83 45.8
BolC3t13839H Brassica oleracea HOM05D009997 ORTHO05D013470 3.2e-10 68.9 82 47.6
C03p13920 Brassica napus HOM05D009997 ORTHO05D013470 5.4e-10 68.2 82 46.3
Thhalv10015154m.g Eutrema salsugineum HOM05D009997 ORTHO05D013470 5.4e-10 68.2 85 45.9
AL2G14490 Arabidopsis lyrata HOM05D012646 ORTHO05D017422 1.2e-09 67.0 85 41.2
A03p11850 Brassica napus HOM05D009997 ORTHO05D013470 1.2e-09 67.0 82 46.3
Thhalv10012291m.g Eutrema salsugineum HOM05D009997 ORTHO05D013470 1.6e-09 66.6 83 45.8
BraA03t10496Z Brassica rapa HOM05D009997 ORTHO05D013470 2.7e-09 65.9 82 45.1
Sp1g14050 Schrenkiella parvula HOM05D009997 ORTHO05D013470 3.5e-09 65.5 83 45.8
Carub.0001s1553 Capsella rubella HOM05D009997 ORTHO05D013470 6.0e-09 64.7 85 43.5
AL2G14480 Arabidopsis lyrata HOM05D012646 ORTHO05D017422 2.3e-08 62.8 90 36.7
Carub.0007s3316 Capsella rubella HOM05D009997 ORTHO05D013470 3.9e-08 62.0 84 41.7
AT2G20465 Arabidopsis thaliana HOM05D018394 ORTHO05D038745 8.7e-08 60.8 83 42.2
BolC5t31817H Brassica oleracea HOM05D009779 ORTHO05D013534 1.1e-07 60.5 82 41.5
BraA09t41495Z Brassica rapa HOM05D009997 ORTHO05D013470 3.3e-07 58.9 85 40.0
Carub.0002s0338 Capsella rubella HOM05D012646 ORTHO05D017422 3.3e-07 58.9 89 38.2
CARHR247500 Cardamine hirsuta HOM05D022922 ORTHO05D024512 3.3e-07 58.9 68 39.7
AT2G40995 Arabidopsis thaliana HOM05D009157 ORTHO05D011114 4.3e-07 58.5 80 43.8
BcaB03g14524 Brassica carinata HOM05D009997 ORTHO05D013470 7.3e-07 57.8 85 38.8
A09p61230 Brassica napus HOM05D009997 ORTHO05D013470 7.3e-07 57.8 85 38.8
BraA06t24784Z Brassica rapa HOM05D009157 ORTHO05D011114 7.3e-07 57.8 78 39.7
A02p11740 Brassica napus HOM05D009157 ORTHO05D011114 9.6e-07 57.4 77 41.6
BNapus_Darmor_BZH_scaffold_232p00090 Brassica napus HOM05D009157 ORTHO05D011114 9.6e-07 57.4 77 41.6
C02p19560 Brassica napus HOM05D009157 ORTHO05D011114 9.6e-07 57.4 77 41.6
BolC2t08093H Brassica oleracea HOM05D009157 ORTHO05D011114 9.6e-07 57.4 77 41.6
BraA02t06239Z Brassica rapa HOM05D009157 ORTHO05D011114 9.6e-07 57.4 77 41.6
Carub.0002s0341 Capsella rubella HOM05D012646 ORTHO05D017422 9.6e-07 57.4 87 37.9
Carub.0002s0344 Capsella rubella HOM05D012646 ORTHO05D114488 2.1e-06 56.2 86 38.4
AT4G08028 Arabidopsis thaliana HOM05D009779 ORTHO05D011114 3.6e-06 55.5 79 39.2
BcaC07g41482 Brassica carinata HOM05D009997 ORTHO05D013470 3.6e-06 55.5 88 38.6
A04p32620 Brassica napus HOM05D011156 ORTHO05D027830 3.6e-06 55.5 85 40.0
C05p19330 Brassica napus HOM05D009157 ORTHO05D011114 3.6e-06 55.5 78 41.0
C08p44800 Brassica napus HOM05D009997 ORTHO05D013470 3.6e-06 55.5 88 38.6
BolC8t52025H Brassica oleracea HOM05D009997 ORTHO05D013470 3.6e-06 55.5 88 38.6
BraA04t18726Z Brassica rapa HOM05D011156 ORTHO05D027830 3.6e-06 55.5 85 40.0
A06p16760 Brassica napus HOM05D009157 ORTHO05D011114 4.8e-06 55.1 78 37.2
A03p15620 Brassica napus HOM05D009157 ORTHO05D011114 8.1e-06 54.3 75 38.7
Carub.0003s2867 Capsella rubella HOM05D009157 ORTHO05D011114 8.1e-06 54.3 81 35.8
Thhalv10023783m.g Eutrema salsugineum HOM05D040754 ORTHO05D011114 8.1e-06 54.3 77 36.4


User provided reference genes

Program Settings