Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT5G59060 Arabidopsis thaliana HOM05D000003 ORTHO05D010566 4.7e-55 217.6 111 100.0
BcaC09g49882 Brassica carinata HOM05D000003 ORTHO05D000283 2.3e-17 92.4 105 44.8
AT5G18880 Arabidopsis thaliana HOM05D000003 ORTHO05D000283 1.5e-16 89.7 104 45.2
BolC6t37289H Brassica oleracea HOM05D000003 ORTHO05D010566 5.7e-16 87.8 107 44.9
BolC7t44516H Brassica oleracea HOM05D000003 ORTHO05D000283 7.4e-16 87.4 107 43.9
BraA06t23500Z Brassica rapa HOM05D000003 ORTHO05D000283 9.7e-16 87.0 103 44.7
BolC3t18461H Brassica oleracea HOM05D000003 ORTHO05D010566 2.2e-15 85.9 103 43.7
BolC5t30669H Brassica oleracea HOM05D000003 ORTHO05D010566 2.2e-15 85.9 103 45.6
Sp6g08880 Schrenkiella parvula HOM05D000003 ORTHO05D010566 2.2e-15 85.9 101 47.5
AL96U10010 Arabidopsis lyrata HOM05D000003 ORTHO05D000004 1.4e-14 83.2 108 40.7
AL4G13920 Arabidopsis lyrata HOM05D000003 ORTHO05D010566 1.8e-14 82.8 107 43.9
BraA07t31644Z Brassica rapa HOM05D000003 ORTHO05D010566 4.1e-14 81.6 104 48.1
Carub.0007s1219 Capsella rubella HOM05D000003 ORTHO05D000283 4.1e-14 81.6 109 41.3
Thhalv10017884m.g Eutrema salsugineum HOM05D000003 ORTHO05D010566 4.1e-14 81.6 104 43.3
BolC9t55125H Brassica oleracea HOM05D000003 ORTHO05D010566 9.0e-14 80.5 104 45.2
Carub.0005s1087 Capsella rubella HOM05D000003 ORTHO05D000283 9.0e-14 80.5 108 38.9
AL9U10510 Arabidopsis lyrata HOM05D000003 ORTHO05D001498 1.2e-13 80.1 107 42.1
BcaC01g02774 Brassica carinata HOM05D000003 ORTHO05D000283 4.5e-13 78.2 104 38.5
BcaB01g02113 Brassica carinata HOM05D000003 ORTHO05D000283 5.0e-12 74.7 107 40.2
BcaC02g10364 Brassica carinata HOM05D000003 ORTHO05D000283 5.0e-12 74.7 114 42.1
Thhalv10017934m.g Eutrema salsugineum HOM05D000003 ORTHO05D010566 5.0e-12 74.7 102 41.2
BcaC07g42435 Brassica carinata HOM05D000003 ORTHO05D000283 6.5e-12 74.3 104 41.3
BcaB05g24536 Brassica carinata HOM05D000003 ORTHO05D000283 2.5e-11 72.4 106 40.6
BraA02t05808Z Brassica rapa HOM05D000003 ORTHO05D000283 2.5e-11 72.4 105 41.9
BcaC02g12383 Brassica carinata HOM05D000003 ORTHO05D000283 3.2e-11 72.0 109 39.4
BcaB06g27122 Brassica carinata HOM05D000003 ORTHO05D000283 4.2e-11 71.6 102 40.2
BolC5t30537H Brassica oleracea HOM05D000003 ORTHO05D000283 7.2e-11 70.9 104 41.3
BcaC05g26562 Brassica carinata HOM05D000003 ORTHO05D000283 9.4e-11 70.5 106 37.7
BcaB01g03207 Brassica carinata HOM05D000003 ORTHO05D000283 1.6e-10 69.7 102 42.2
BcaC09g50321 Brassica carinata HOM05D000003 ORTHO05D010566 2.1e-10 69.3 102 42.2
BcaC03g13447 Brassica carinata HOM05D000003 ORTHO05D000283 7.9e-10 67.4 103 38.8
BcaB04g20911 Brassica carinata HOM05D000003 ORTHO05D000004 1.0e-09 67.0 89 44.9
BolC3t20532H Brassica oleracea HOM05D000003 ORTHO05D010566 1.4e-09 66.6 104 43.3
BraA10t44187Z Brassica rapa HOM05D000003 ORTHO05D000283 2.3e-09 65.9 105 37.1
BolC5t32258H Brassica oleracea HOM05D000003 ORTHO05D000007 3.9e-09 65.1 103 37.9
THA.LOC109116242 Tarenaya hassleriana HOM05D000003 ORTHO05D000283 5.1e-09 64.7 98 38.8
BcaC07g38548 Brassica carinata HOM05D000003 ORTHO05D010566 6.7e-09 64.3 62 56.5
BraA08t34175Z Brassica rapa HOM05D000003 ORTHO05D010566 6.7e-09 64.3 104 36.5
BcaB03g14902 Brassica carinata HOM05D000003 ORTHO05D000004 1.1e-08 63.5 95 40.0
BcaB07g30860 Brassica carinata HOM05D000003 ORTHO05D000007 1.1e-08 63.5 110 38.2
BcaC01g03694 Brassica carinata HOM05D000003 ORTHO05D000283 1.1e-08 63.5 108 38.0
BcaC02g12237 Brassica carinata HOM05D000003 ORTHO05D000007 1.5e-08 63.2 106 34.9
BcaC05g25976 Brassica carinata HOM05D000003 ORTHO05D010566 1.5e-08 63.2 109 36.7
BraA07t28084Z Brassica rapa HOM05D000003 ORTHO05D010566 1.5e-08 63.2 50 58.0
THA.LOC104820081 Tarenaya hassleriana HOM05D000003 ORTHO05D010566 1.5e-08 63.2 75 46.7
BcaC03g18111 Brassica carinata HOM05D000003 ORTHO05D010566 1.9e-08 62.8 62 54.8
BcaC06g34308 Brassica carinata HOM05D000003 ORTHO05D010566 1.9e-08 62.8 95 42.1
AL6G39210 Arabidopsis lyrata HOM05D000003 ORTHO05D000283 2.5e-08 62.4 106 41.5
BcaC06g34146 Brassica carinata HOM05D000003 ORTHO05D000283 3.3e-08 62.0 103 35.0
BcaC04g21154 Brassica carinata HOM05D000003 ORTHO05D000283 4.3e-08 61.6 106 36.8
BcaC05g27022 Brassica carinata HOM05D000003 ORTHO05D010566 4.3e-08 61.6 72 50.0
BolC5t31604H Brassica oleracea HOM05D000003 ORTHO05D010566 4.3e-08 61.6 72 50.0
BcaB07g30964 Brassica carinata HOM05D000003 ORTHO05D000283 7.4e-08 60.8 104 34.6
BcaC05g25065 Brassica carinata HOM05D000003 ORTHO05D000283 7.4e-08 60.8 105 34.3
C03p70250 Brassica napus HOM05D000003 ORTHO05D010566 7.4e-08 60.8 86 41.9
THA.LOC104815125 Tarenaya hassleriana HOM05D000003 ORTHO05D000283 7.4e-08 60.8 85 38.8
BcaB06g25353 Brassica carinata HOM05D000003 ORTHO05D000283 9.7e-08 60.5 104 34.6
BcaC08g43142 Brassica carinata HOM05D000003 ORTHO05D000283 9.7e-08 60.5 102 38.2
C06p09410 Brassica napus HOM05D000003 ORTHO05D010566 9.7e-08 60.5 72 50.0
AL7G34100 Arabidopsis lyrata HOM05D000003 ORTHO05D000004 1.3e-07 60.1 113 38.1
BcaB04g19079 Brassica carinata HOM05D000003 ORTHO05D000283 1.3e-07 60.1 103 34.0
BcaC09g50945 Brassica carinata HOM05D000003 ORTHO05D000007 1.3e-07 60.1 65 50.8
BolC2t08958H Brassica oleracea HOM05D000003 ORTHO05D010566 1.3e-07 60.1 86 41.9
BolC3t15296H Brassica oleracea HOM05D000003 ORTHO05D000006 1.3e-07 60.1 107 37.4
BolC8t48980H Brassica oleracea HOM05D000003 ORTHO05D010566 1.7e-07 59.7 79 44.3
BcaC04g21713 Brassica carinata HOM05D000003 ORTHO05D000007 2.2e-07 59.3 103 33.0
THA.LOC104803385 Tarenaya hassleriana HOM05D000003 ORTHO05D000283 2.2e-07 59.3 108 32.4
BcaB06g25889 Brassica carinata HOM05D000003 ORTHO05D000007 2.8e-07 58.9 80 45.0
BcaB07g32023 Brassica carinata HOM05D000003 ORTHO05D000283 2.8e-07 58.9 104 33.7
BcaC05g25979 Brassica carinata HOM05D000003 ORTHO05D000007 2.8e-07 58.9 64 45.3
BolC2t07434H Brassica oleracea HOM05D000003 ORTHO05D010566 2.8e-07 58.9 64 45.3
THA.LOC104817072 Tarenaya hassleriana HOM05D000003 ORTHO05D000004 2.8e-07 58.9 85 41.2
THA.LOC104825191 Tarenaya hassleriana HOM05D000003 ORTHO05D000283 2.8e-07 58.9 87 39.1
THA.LOC104825769 Tarenaya hassleriana HOM05D000003 ORTHO05D000004 2.8e-07 58.9 87 39.1
THA.LOC109116848 Tarenaya hassleriana HOM05D000003 ORTHO05D000283 2.8e-07 58.9 88 38.6
AT4G16745 Arabidopsis thaliana HOM05D000191 ORTHO05D000122 3.7e-07 58.5 67 46.3
BcaC01g05180 Brassica carinata HOM05D000003 ORTHO05D000007 3.7e-07 58.5 107 36.4
BcaC02g10935 Brassica carinata HOM05D000003 ORTHO05D039714 3.7e-07 58.5 91 40.7
C04p23510 Brassica napus HOM05D000003 ORTHO05D039714 3.7e-07 58.5 91 40.7
BraA09t36384Z Brassica rapa HOM05D000003 ORTHO05D010566 4.8e-07 58.2 94 40.4
BolC2t12234H Brassica oleracea HOM05D000003 ORTHO05D010566 6.3e-07 57.8 79 43.0
BcaB03g15450 Brassica carinata HOM05D000003 ORTHO05D010566 1.1e-06 57.0 98 40.8
BcaC01g04947 Brassica carinata HOM05D000003 ORTHO05D000283 1.1e-06 57.0 106 34.0
BcaNung03095 Brassica carinata HOM05D000003 ORTHO05D000283 1.1e-06 57.0 103 35.9
BraA05t20597Z Brassica rapa HOM05D000003 ORTHO05D010566 1.1e-06 57.0 86 39.5
BolC7t40749H Brassica oleracea HOM05D000003 ORTHO05D010566 1.4e-06 56.6 97 39.2
A04p00180 Brassica napus HOM05D000003 ORTHO05D010566 1.8e-06 56.2 58 44.8
BraA04t15739Z Brassica rapa HOM05D000003 ORTHO05D010566 1.8e-06 56.2 58 44.8
BcaC07g39338 Brassica carinata HOM05D000003 ORTHO05D000007 3.1e-06 55.5 62 41.9
BolC3t18601H Brassica oleracea HOM05D000003 ORTHO05D010566 3.1e-06 55.5 94 38.3
THA.LOC104799701 Tarenaya hassleriana HOM05D000003 ORTHO05D000283 3.1e-06 55.5 86 32.6
BcaB03g15077 Brassica carinata HOM05D000003 ORTHO05D000283 4.1e-06 55.1 104 33.7
BcaB05g24914 Brassica carinata HOM05D000003 ORTHO05D000283 4.1e-06 55.1 112 32.1
BcaB06g27113 Brassica carinata HOM05D000003 ORTHO05D010566 4.1e-06 55.1 101 34.7
BraA07t30333Z Brassica rapa HOM05D000003 ORTHO05D010566 4.1e-06 55.1 98 34.7
BraA10t42560Z Brassica rapa HOM05D000003 ORTHO05D000283 4.1e-06 55.1 109 33.0
THA.LOC104798680 Tarenaya hassleriana HOM05D000003 ORTHO05D000004 5.3e-06 54.7 88 31.8
BolC6t38647H Brassica oleracea HOM05D000003 ORTHO05D010566 6.9e-06 54.3 60 45.0


User provided reference genes

Program Settings