Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT5G58630 Arabidopsis thaliana HOM05D011448 ORTHO05D003520 1.1e-204 716.5 373 100.0
AL8G34900 Arabidopsis lyrata HOM05D011448 ORTHO05D003520 8.7e-162 573.9 379 80.5
Thhalv10015324m.g Eutrema salsugineum HOM05D011448 ORTHO05D003520 2.3e-138 496.1 392 72.2
BcaC04g19824 Brassica carinata HOM05D011448 ORTHO05D003520 4.1e-119 432.2 382 67.0
BolC9t57921H Brassica oleracea HOM05D011448 ORTHO05D003520 4.1e-119 432.2 382 67.0
CARHR272490 Cardamine hirsuta HOM05D011448 ORTHO05D003520 7.0e-119 431.4 380 67.6
A10p15630 Brassica napus HOM05D011448 ORTHO05D003520 7.0e-111 404.8 382 64.7
C09p50710 Brassica napus HOM05D011448 ORTHO05D003520 9.2e-111 404.4 382 64.4
Sp6g20330 Schrenkiella parvula HOM05D011448 ORTHO05D003520 1.3e-104 384.0 382 60.2
BraA10t43670Z Brassica rapa HOM05D011448 ORTHO05D003520 2.9e-104 382.9 382 62.8
Carub.0008s1925 Capsella rubella HOM05D011448 ORTHO05D003520 8.3e-96 354.8 315 65.7
THA.LOC104810708 Tarenaya hassleriana HOM05D003726 ORTHO05D003520 6.3e-43 179.1 406 39.7
COL.COLO4_19173 Corchorus olitorius HOM05D003726 ORTHO05D003520 1.4e-26 124.8 418 30.9
TAR623G0590 Trochodendron aralioides HOM05D003726 ORTHO05D003520 1.7e-24 117.9 392 32.9
Cfa011708 Carpinus fangiana HOM05D003726 ORTHO05D003520 2.9e-24 117.1 422 30.8
Thecc.09G299900 Theobroma cacao HOM05D003726 ORTHO05D003520 5.0e-24 116.3 437 33.4
Gorai.009G091100 Gossypium raimondii HOM05D003726 ORTHO05D003520 4.2e-23 113.2 430 31.6
Gohir.A05G087800 Gossypium hirsutum HOM05D003726 ORTHO05D003520 7.2e-23 112.5 430 31.9
Gohir.D05G088900 Gossypium hirsutum HOM05D003726 ORTHO05D003520 1.6e-22 111.3 427 30.9
Cpa.g.sc112.4 Carica papaya HOM05D003726 ORTHO05D003520 8.0e-22 109.0 435 30.6
Sed0002259 Sechium edule HOM05D003726 ORTHO05D003520 2.3e-21 107.5 393 29.3
CiPaw.14G058500 Carya illinoinensis HOM05D003726 ORTHO05D003520 5.2e-21 106.3 421 30.9
CiPaw.13G076400 Carya illinoinensis HOM05D003726 ORTHO05D003520 1.2e-20 105.1 450 30.0
Eucgr.B02248 Eucalyptus grandis HOM05D003726 ORTHO05D003520 2.0e-20 104.4 410 29.8
MD03G1068300 Malus domestica HOM05D003726 ORTHO05D003520 3.3e-20 103.6 388 30.9
QL01p038574 Quercus lobata HOM05D003726 ORTHO05D003520 7.5e-20 102.4 449 30.3
Duzib168G1865 Durio zibethinus HOM05D003726 ORTHO05D003520 1.7e-19 101.3 439 31.0
BcaC09g48271 Brassica carinata HOM05D011448 ORTHO05D003520 3.7e-19 100.1 85 65.9
C01p52290 Brassica napus HOM05D011448 ORTHO05D003520 3.7e-19 100.1 85 65.9
BolC1t05169H Brassica oleracea HOM05D011448 ORTHO05D003520 3.7e-19 100.1 85 65.9
EL10Ac7g16184 Beta vulgaris HOM05D003726 ORTHO05D003520 6.3e-19 99.4 425 29.2
DCAR_005887 Daucus carota HOM05D003726 ORTHO05D003520 6.3e-19 99.4 404 30.9
Duzib170G0773 Durio zibethinus HOM05D003726 ORTHO05D003520 6.3e-19 99.4 325 34.5
Manes.02G118700 Manihot esculenta HOM05D003726 ORTHO05D003520 8.2e-19 99.0 445 29.0
Actinidia23884 Actinidia chinensis HOM05D003726 ORTHO05D003520 1.8e-18 97.8 417 29.5
CANSAT54G2733 Cannabis sativa HOM05D003726 ORTHO05D003520 3.1e-18 97.1 403 29.5
arahy.Tifrunner.gnm1.ann1.P4YYRQ Arachis hypogaea HOM05D003726 ORTHO05D003520 1.2e-17 95.1 387 29.5
Potri.009G046900 Populus trichocarpa HOM05D003726 ORTHO05D003520 1.2e-17 95.1 443 29.1
ClCG03G000690 Citrullus lanatus HOM05D003726 ORTHO05D003520 1.6e-17 94.7 415 30.1
arahy.Tifrunner.gnm1.ann1.IE2B4C Arachis hypogaea HOM05D003726 ORTHO05D003520 2.0e-17 94.4 404 29.0
Haze_24339 Corylus avellana HOM05D003726 ORTHO05D003520 2.0e-17 94.4 414 29.7
Hma1.2p1_0962F.1_g241820 Hydrangea macrophylla HOM05D003726 ORTHO05D003520 3.5e-17 93.6 396 29.3
Sabra09G0034300 Salix brachista HOM05D003726 ORTHO05D003520 4.5e-17 93.2 435 28.3
TAR369G0146 Trochodendron aralioides HOM05D003726 ORTHO05D003520 4.5e-17 93.2 404 27.5
Dinv28651 Davidia involucrata HOM05D003726 ORTHO05D003520 1.7e-16 91.3 430 29.5
Aqoxy4G02538 Aquilegia oxysepala HOM05D003726 ORTHO05D003520 2.9e-16 90.5 407 29.7
Nn2g10861 Nelumbo nucifera HOM05D003726 ORTHO05D003520 3.8e-16 90.1 444 28.4
CSS0031801 Camellia sinensis var. sinensis HOM05D003726 ORTHO05D003520 6.5e-16 89.4 400 27.2
TWI31G1278 Tripterygium wilfordii HOM05D003726 ORTHO05D003520 8.5e-16 89.0 407 27.5
Prupe.6G056200 Prunus persica HOM05D003726 ORTHO05D003520 1.1e-15 88.6 410 29.0
CsaV3_1G036240 Cucumis sativus L. HOM05D003726 ORTHO05D003520 1.5e-15 88.2 415 29.9
Actinidia34457 Actinidia chinensis HOM05D003726 ORTHO05D003520 1.9e-15 87.8 393 28.0
PGR102G0699 Punica granatum HOM05D003726 ORTHO05D003520 1.9e-15 87.8 389 27.2
LjContig00155g0026227 Lotus japonicus HOM05D003726 ORTHO05D003520 2.5e-15 87.4 418 29.4
MELO3C020542.2 Cucumis melo HOM05D003726 ORTHO05D003520 3.2e-15 87.0 416 29.8
FAN21G3554 Fragaria x ananassa HOM05D003726 ORTHO05D003520 9.4e-15 85.5 377 29.4
MD11G1072700 Malus domestica HOM05D003726 ORTHO05D003520 2.7e-14 84.0 378 30.7
Cpa.g.sc11.124 Carica papaya HOM05D003726 ORTHO05D003520 6.1e-14 82.8 420 25.7
BcaC09g48270 Brassica carinata HOM05D011448 ORTHO05D039648 1.4e-13 81.6 71 64.8
Ah.08g221410 Amaranthus hybridus HOM05D003726 ORTHO05D003520 1.8e-13 81.3 385 29.1
Phvul.008G260800 Phaseolus vulgaris HOM05D003726 ORTHO05D003520 1.8e-13 81.3 408 29.9
BolC1t05170H Brassica oleracea HOM05D011448 ORTHO05D039648 6.8e-13 79.3 70 64.3
FAN16G2238 Fragaria x ananassa HOM05D003726 ORTHO05D003520 8.8e-13 79.0 385 28.8
FAN11G0812 Fragaria x ananassa HOM05D003726 ORTHO05D003520 1.2e-12 78.6 380 28.9
Lj6g0007419 Lotus japonicus HOM05D003726 ORTHO05D003520 1.2e-12 78.6 395 29.4
VMungo0647G1535 Vigna mungo HOM05D003726 ORTHO05D003520 1.2e-12 78.6 418 28.0
FvH4_3g38760 Fragaria vesca HOM05D003726 ORTHO05D003520 2.0e-12 77.8 380 28.9
FAN25G1890 Fragaria x ananassa HOM05D003726 ORTHO05D003520 2.6e-12 77.4 385 28.6
TPR.G15189 Trifolium pratense HOM05D003726 ORTHO05D003520 2.6e-12 77.4 419 29.1
CSS0008670 Camellia sinensis var. sinensis HOM05D003726 ORTHO05D003520 3.4e-12 77.0 407 26.5
Atru.chr3.4198 Acer truncatum HOM05D003726 ORTHO05D003520 1.3e-11 75.1 356 28.4
CSS0035019 Camellia sinensis var. sinensis HOM05D003726 ORTHO05D003520 1.3e-11 75.1 398 26.1
Medtr3g464300 Medicago truncatula HOM05D003726 ORTHO05D003520 1.3e-11 75.1 426 28.4
AUR62020147 Chenopodium quinoa HOM05D003726 ORTHO05D003520 2.2e-11 74.3 377 28.4
Actinidia05361 Actinidia chinensis HOM05D003726 ORTHO05D003520 3.7e-11 73.6 155 37.4
Cc01_g14320 Coffea canephora HOM05D003726 ORTHO05D003520 4.8e-11 73.2 426 26.3
Nitab4.5_0008578g0030 Nicotiana tabacum HOM05D003726 ORTHO05D003520 4.8e-11 73.2 394 26.9
Nn2g13146 Nelumbo nucifera HOM05D003726 ORTHO05D003520 8.3e-11 72.4 447 27.3
Glyma.14G194200 Glycine max HOM05D003726 ORTHO05D003520 1.1e-10 72.0 435 26.9
SalBow2G1798 Salvia bowleyana HOM05D003726 ORTHO05D003520 1.8e-10 71.2 378 28.0
MSTRG.12680 Avicennia marina HOM05D003726 ORTHO05D003520 2.4e-10 70.9 392 28.3
Lsat_1_v5_gn_8_70880 Lactuca sativa HOM05D003726 ORTHO05D003520 3.1e-10 70.5 389 29.8
RcHm_v2.0_Chr5g0069911 Rosa chinensis HOM05D003726 ORTHO05D003520 3.1e-10 70.5 398 29.9
Sed0010018 Sechium edule HOM05D003726 ORTHO05D003520 3.1e-10 70.5 395 27.8
Duzib093G1061 Durio zibethinus HOM05D003726 ORTHO05D003520 5.4e-10 69.7 406 27.1
Lalb_Chr18g0050991 Lupinus albus HOM05D003726 ORTHO05D003520 5.4e-10 69.7 407 25.8
PSO339G6116 Papaver somniferum HOM05D003726 ORTHO05D003520 5.4e-10 69.7 375 23.7
TWI53G1918 Tripterygium wilfordii HOM05D003726 ORTHO05D003520 2.0e-09 67.8 399 26.1
Lalb_Chr04g0252221 Lupinus albus HOM05D003726 ORTHO05D003520 4.5e-09 66.6 419 28.6
SalBow4G2563 Salvia bowleyana HOM05D003726 ORTHO05D003520 4.5e-09 66.6 166 34.3
PGSC0003DMG400030244 Solanum tuberosum HOM05D003726 ORTHO05D003520 4.5e-09 66.6 366 24.3
Glyma.18G062100 Glycine max HOM05D003726 ORTHO05D003520 5.9e-09 66.2 438 27.2
Solyc09g005570.3 Solanum lycopersicum HOM05D003726 ORTHO05D003520 5.9e-09 66.2 363 25.1
Sopen09g001480 Solanum pennellii HOM05D003726 ORTHO05D003520 5.9e-09 66.2 363 25.1
CSS0024143 Camellia sinensis var. sinensis HOM05D003726 ORTHO05D003520 1.0e-08 65.5 380 25.0
Nitab4.5_0002020g0040 Nicotiana tabacum HOM05D003726 ORTHO05D003520 1.0e-08 65.5 384 26.0
Psat5g158000 Pisum sativum HOM05D003726 ORTHO05D003520 1.0e-08 65.5 431 26.9
Glyma.11G174300 Glycine max HOM05D003726 ORTHO05D003520 1.7e-08 64.7 441 27.7
COL.COLO4_14518 Corchorus olitorius HOM05D003726 ORTHO05D003520 2.3e-08 64.3 378 27.0
Nitab4.5_0000261g0020 Nicotiana tabacum HOM05D003726 ORTHO05D003520 2.9e-08 63.9 373 25.2
Aa31LG11G410 Aethionema arabicum HOM05D011448 ORTHO05D003520 3.8e-08 63.5 336 30.7
ClCG10G022200 Citrullus lanatus HOM05D003726 ORTHO05D003520 3.8e-08 63.5 376 24.7
Rhsim13G0068300 Rhododendron simsii HOM05D003726 ORTHO05D003520 3.8e-08 63.5 385 27.0
AUR62001632 Chenopodium quinoa HOM05D003726 ORTHO05D003520 5.0e-08 63.2 205 31.7
Duzib128G0808 Durio zibethinus HOM05D003726 ORTHO05D003520 5.0e-08 63.2 398 25.6
Gohir.A09G165800 Gossypium hirsutum HOM05D003726 ORTHO05D003520 5.0e-08 63.2 389 25.7
Thecc.05G014300 Theobroma cacao HOM05D003726 ORTHO05D003520 8.6e-08 62.4 414 25.4
GSVIVG01011170001 Vitis vinifera HOM05D003726 ORTHO05D003520 1.9e-07 61.2 333 28.2
TWI74G0063 Tripterygium wilfordii HOM05D003726 ORTHO05D003520 3.3e-07 60.5 435 24.4
Gorai.006G183100 Gossypium raimondii HOM05D003726 ORTHO05D003520 4.2e-07 60.1 388 25.0
Peaxi162Scf00170g00213 Petunia axillaris HOM05D003726 ORTHO05D003520 5.5e-07 59.7 172 34.9
Gohir.D09G161366 Gossypium hirsutum HOM05D003726 ORTHO05D003520 9.5e-07 58.9 372 23.7
Atru.chr8.2256 Acer truncatum HOM05D003726 ORTHO05D003520 1.2e-06 58.5 407 26.0
Ciclev10011806m.g Citrus clementina HOM05D003726 ORTHO05D003520 1.2e-06 58.5 418 25.1
ECA236G2409 Erigeron canadensis HOM05D000674 ORTHO05D001490 1.6e-06 58.2 313 28.1
Glyma.02G227100 Glycine max HOM05D003726 ORTHO05D003520 1.6e-06 58.2 409 25.9
EL10Ac5g12551 Beta vulgaris HOM05D029928 ORTHO05D003520 2.1e-06 57.8 394 26.9
Dinv03102 Davidia involucrata HOM05D003726 ORTHO05D003520 3.6e-06 57.0 298 28.2
Sed0008005 Sechium edule HOM05D003726 ORTHO05D003520 3.6e-06 57.0 379 25.6
THA.LOC104816197 Tarenaya hassleriana HOM05D013727 ORTHO05D003520 3.6e-06 57.0 421 23.0
Lj1P136T16 Lonicera japonica HOM05D003726 ORTHO05D003520 4.7e-06 56.6 308 27.6
DCAR_024016 Daucus carota HOM05D003726 ORTHO05D003520 8.0e-06 55.8 377 23.3


User provided reference genes

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