Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT5G57230 Arabidopsis thaliana HOM05D006321 ORTHO05D007929 1.2e-114 416.4 199 100.0
BraA10t43551Z Brassica rapa HOM05D006321 ORTHO05D007929 2.2e-95 352.4 174 96.0
BolC9t57758H Brassica oleracea HOM05D006321 ORTHO05D007929 1.3e-92 343.2 180 91.1
AL8G33200 Arabidopsis lyrata HOM05D006321 ORTHO05D007929 2.5e-91 339.0 161 98.8
Carub.0008s1773 Capsella rubella HOM05D006321 ORTHO05D007929 3.3e-91 338.6 161 98.1
Thhalv10014893m.g Eutrema salsugineum HOM05D006321 ORTHO05D007929 2.8e-90 335.5 161 96.9
BcaC04g19986 Brassica carinata HOM05D006321 ORTHO05D007929 3.6e-90 335.1 161 96.3
A10p14640 Brassica napus HOM05D006321 ORTHO05D007929 1.1e-89 333.6 161 96.3
CARHR271020 Cardamine hirsuta HOM05D006321 ORTHO05D007929 1.8e-89 332.8 161 95.7
BcaB08g36085 Brassica carinata HOM05D006321 ORTHO05D007929 2.4e-89 332.4 161 96.3
Sp6g18970 Schrenkiella parvula HOM05D006321 ORTHO05D007929 6.9e-89 330.9 161 95.0
C09p49090 Brassica napus HOM05D006321 ORTHO05D007929 1.3e-87 326.6 169 91.1
Aa31LG3G13120 Aethionema arabicum HOM05D006321 ORTHO05D007929 5.5e-86 321.2 161 91.9
COL.COLO4_27457 Corchorus olitorius HOM05D006321 ORTHO05D007929 2.7e-77 292.4 161 80.7
THA.LOC104817778 Tarenaya hassleriana HOM05D006321 ORTHO05D007929 4.6e-77 291.6 162 82.7
Aqoxy3G01064 Aquilegia oxysepala HOM05D006321 ORTHO05D007929 1.9e-75 286.2 161 77.0
Glyma.01G110600 Glycine max HOM05D006321 ORTHO05D007929 1.9e-75 286.2 161 77.6
Dinv25432 Davidia involucrata HOM05D006321 ORTHO05D007929 4.3e-75 285.0 162 76.5
Glyma.03G076300 Glycine max HOM05D006321 ORTHO05D007929 7.4e-75 284.3 161 76.4
Medtr3g465100 Medicago truncatula HOM05D006321 ORTHO05D007929 1.3e-74 283.5 161 77.0
Rhsim01G0118600 Rhododendron simsii HOM05D006321 ORTHO05D007929 1.3e-74 283.5 163 75.5
TPR.G32885 Trifolium pratense HOM05D006321 ORTHO05D007929 2.1e-74 282.7 162 76.5
Duzib251G0486 Durio zibethinus HOM05D006321 ORTHO05D007929 2.8e-74 282.3 162 79.0
Sc03g0007150 Simmondsia chinensis HOM05D006321 ORTHO05D007929 3.7e-74 282.0 161 77.0
CiPaw.08G033200 Carya illinoinensis HOM05D006321 ORTHO05D007929 4.8e-74 281.6 161 75.8
Potri.018G143500 Populus trichocarpa HOM05D006321 ORTHO05D007929 4.8e-74 281.6 162 79.0
QL02p047686 Quercus lobata HOM05D006321 ORTHO05D007929 6.3e-74 281.2 160 75.0
arahy.Tifrunner.gnm1.ann1.CI6UTV Arachis hypogaea HOM05D006321 ORTHO05D007929 8.2e-74 280.8 159 76.7
Nitab4.5_0002365g0010 Nicotiana tabacum HOM05D006321 ORTHO05D007929 8.2e-74 280.8 163 74.2
Sed0024765 Sechium edule HOM05D006321 ORTHO05D007929 8.2e-74 280.8 154 79.2
Thecc.09G184700 Theobroma cacao HOM05D006321 ORTHO05D007929 8.2e-74 280.8 156 80.1
CSS0046955 Camellia sinensis var. sinensis HOM05D006321 ORTHO05D007929 1.8e-73 279.6 158 77.2
COL.COLO4_07534 Corchorus olitorius HOM05D006321 ORTHO05D007929 1.8e-73 279.6 148 83.8
Nitab4.5_0000366g0180 Nicotiana tabacum HOM05D006321 ORTHO05D007929 1.8e-73 279.6 163 74.8
Gohir.A06G171500 Gossypium hirsutum HOM05D006321 ORTHO05D007929 3.1e-73 278.9 159 77.4
Gorai.010G210200 Gossypium raimondii HOM05D006321 ORTHO05D007929 3.1e-73 278.9 159 77.4
Ca_14974_v3 Cicer arietinum L. HOM05D006321 ORTHO05D007929 4.1e-73 278.5 161 76.4
Psat4g027120 Pisum sativum HOM05D006321 ORTHO05D007929 4.1e-73 278.5 161 75.8
Psat2g182520 Pisum sativum HOM05D006321 ORTHO05D004512 5.3e-73 278.1 160 75.6
Gohir.D06G179600 Gossypium hirsutum HOM05D006321 ORTHO05D007929 1.2e-72 276.9 159 76.7
VMungo0540G0928 Vigna mungo HOM05D006321 ORTHO05D007929 1.2e-72 276.9 161 76.4
CSS0021189 Camellia sinensis var. sinensis HOM05D006321 ORTHO05D007929 1.5e-72 276.6 158 75.9
Lalb_Chr04g0263391 Lupinus albus HOM05D006321 ORTHO05D007929 2.0e-72 276.2 159 74.8
CSS0019729 Camellia sinensis var. sinensis HOM05D006321 ORTHO05D007929 2.6e-72 275.8 158 75.9
arahy.Tifrunner.gnm1.ann1.N3I1N2 Arachis hypogaea HOM05D006321 ORTHO05D007929 7.6e-72 274.2 152 78.3
Eucgr.C00122 Eucalyptus grandis HOM05D006321 ORTHO05D007929 1.0e-71 273.9 159 73.0
TWI60G1509 Tripterygium wilfordii HOM05D006321 ORTHO05D007929 1.3e-71 273.5 161 72.7
CAN.G547.21 Capsicum annuum HOM05D006321 ORTHO05D007929 1.7e-71 273.1 158 74.1
RcHm_v2.0_Chr4g0399821 Rosa chinensis HOM05D006321 ORTHO05D007929 1.7e-71 273.1 161 74.5
Solyc07g008910.3 Solanum lycopersicum HOM05D006321 ORTHO05D007929 1.7e-71 273.1 158 72.8
MELO3C012967.2 Cucumis melo HOM05D006321 ORTHO05D007929 2.2e-71 272.7 154 76.6
Phvul.006G013600 Phaseolus vulgaris HOM05D006321 ORTHO05D007929 2.2e-71 272.7 161 75.8
PGSC0003DMG400028738 Solanum tuberosum HOM05D006321 ORTHO05D007929 2.2e-71 272.7 158 74.1
Atru.chr7.791 Acer truncatum HOM05D006321 ORTHO05D007929 2.9e-71 272.3 161 74.5
CAN.G279.32 Capsicum annuum HOM05D006321 ORTHO05D007929 2.9e-71 272.3 158 74.1
FvH4_4g07380 Fragaria vesca HOM05D006321 ORTHO05D007929 2.9e-71 272.3 158 76.6
FAN12G2844 Fragaria x ananassa HOM05D006321 ORTHO05D007929 2.9e-71 272.3 158 76.6
FAN22G1279 Fragaria x ananassa HOM05D006321 ORTHO05D007929 2.9e-71 272.3 158 76.6
Ciclev10008911m.g Citrus clementina HOM05D006321 ORTHO05D007929 5.0e-71 271.6 160 73.8
CsaV3_3G025050 Cucumis sativus L. HOM05D006321 ORTHO05D007929 6.5e-71 271.2 154 76.6
Manes.02G106300 Manihot esculenta HOM05D006321 ORTHO05D007929 6.5e-71 271.2 161 75.2
Phvul.003G138800 Phaseolus vulgaris HOM05D006321 ORTHO05D007929 6.5e-71 271.2 161 74.5
Phvul.003G139178 Phaseolus vulgaris HOM05D006321 ORTHO05D007929 6.5e-71 271.2 161 74.5
Migut.L01889 Erythranthe guttata HOM05D006321 ORTHO05D007929 1.1e-70 270.4 158 75.3
Potri.006G076300 Populus trichocarpa HOM05D006321 ORTHO05D007929 1.1e-70 270.4 162 75.3
EL10Ac5g11827 Beta vulgaris HOM05D006321 ORTHO05D007929 3.2e-70 268.9 161 72.0
TAR622G0244 Trochodendron aralioides HOM05D006321 ORTHO05D007929 3.2e-70 268.9 161 72.7
GSVIVG01010872001 Vitis vinifera HOM05D006321 ORTHO05D007929 3.2e-70 268.9 155 74.8
Prupe.1G076700 Prunus persica HOM05D006321 ORTHO05D007929 4.2e-70 268.5 161 72.7
MSTRG.10445 Avicennia marina HOM05D006321 ORTHO05D007929 7.2e-70 267.7 161 74.5
Cc06_g21570 Coffea canephora HOM05D006321 ORTHO05D007929 7.2e-70 267.7 161 72.7
FAN07G2214 Fragaria x ananassa HOM05D006321 ORTHO05D007929 2.7e-69 265.8 152 77.6
CANSAT11G0316 Cannabis sativa HOM05D006321 ORTHO05D007929 3.6e-69 265.4 162 72.2
PGR142G1933 Punica granatum HOM05D006321 ORTHO05D007929 3.6e-69 265.4 161 72.7
HPP92_002000 Vanilla planifolia HOM05D006321 ORTHO05D007929 6.1e-69 264.6 157 72.6
HanXRQChr16g0529271 Helianthus annuus HOM05D006321 ORTHO05D007929 1.0e-68 263.8 161 69.6
Lj6g0010246 Lotus japonicus HOM05D006321 ORTHO05D007929 1.3e-68 263.5 161 73.3
ECA240G2363 Erigeron canadensis HOM05D006321 ORTHO05D007929 2.3e-68 262.7 161 71.4
HanXRQChr03g0068421 Helianthus annuus HOM05D006321 ORTHO05D007929 2.3e-68 262.7 152 73.7
MBI17_g07973_MAGBIO Magnolia biondii HOM05D006321 ORTHO05D007929 2.3e-68 262.7 158 72.2
AUR62030699 Chenopodium quinoa HOM05D006321 ORTHO05D007929 8.7e-68 260.8 161 67.7
Lsat_1_v5_gn_7_55681 Lactuca sativa HOM05D006321 ORTHO05D007929 1.1e-67 260.4 160 73.8
ECA234G0872 Erigeron canadensis HOM05D006321 ORTHO05D007929 1.5e-67 260.0 161 70.8
AUR62030694 Chenopodium quinoa HOM05D006321 ORTHO05D007929 1.9e-67 259.6 161 67.1
Os06g0482200 Oryza sativa ssp. japonica HOM05D006321 ORTHO05D007929 1.9e-67 259.6 155 71.6
SGA_v2.0_scaffold21G09650 Striga asiatica HOM05D006321 ORTHO05D007929 1.9e-67 259.6 159 71.1
Os10g0162834 Oryza sativa ssp. japonica HOM05D006321 ORTHO05D007929 8.2e-66 254.2 155 69.7
PSO339G6079 Papaver somniferum HOM05D006321 ORTHO05D007929 8.2e-66 254.2 162 68.5
Actinidia01283 Actinidia chinensis HOM05D006321 ORTHO05D007929 1.4e-65 253.4 161 73.9
Hund14984 Selenicereus undatus HOM05D006321 ORTHO05D007929 1.5e-64 250.0 214 53.7
MD16G1249800 Malus domestica HOM05D006321 ORTHO05D007929 2.0e-64 249.6 148 76.4
Cpa.g.sc95.16 Carica papaya HOM05D006321 ORTHO05D007929 3.4e-64 248.8 161 70.8
PSO384G3851 Papaver somniferum HOM05D006321 ORTHO05D007929 7.7e-64 247.7 162 66.7
Zm00001eb161640 Zea mays HOM05D006321 ORTHO05D007929 2.2e-63 246.1 149 71.1
Ah.12g059430 Amaranthus hybridus HOM05D006321 ORTHO05D007929 1.1e-62 243.8 156 67.9
Nn2g12444 Nelumbo nucifera HOM05D006321 ORTHO05D007929 1.9e-62 243.0 135 79.3
CDE06G2300 Ceratophyllum demersum HOM05D006321 ORTHO05D007929 1.6e-61 240.0 138 76.1
SEGI_34333 Sequoiadendron giganteum HOM05D006321 ORTHO05D007929 3.9e-60 235.3 155 65.8
AUR62036340 Chenopodium quinoa HOM05D006321 ORTHO05D007929 2.0e-59 233.0 135 72.6
Sopen07g004840 Solanum pennellii HOM05D003168 ORTHO05D003590 2.0e-59 233.0 135 74.1
unitig_736.g22252 Utricularia gibba HOM05D006321 ORTHO05D007929 3.3e-59 232.3 138 72.5
MD13G1243200 Malus domestica HOM05D006321 ORTHO05D007929 1.4e-57 226.9 138 73.2
Haze_22010 Corylus avellana HOM05D006321 ORTHO05D007929 2.2e-55 219.5 151 67.5
Sabra18G0117000 Salix brachista HOM05D003168 ORTHO05D003525 6.5e-55 218.0 117 82.1
Psat5g235880 Pisum sativum HOM05D006321 ORTHO05D007929 2.5e-54 216.1 121 76.0
vmacro20823 Vaccinium macrocarpon HOM05D006321 ORTHO05D007929 1.5e-51 206.8 141 66.0
Sabra06G0057200 Salix brachista HOM05D006321 ORTHO05D007929 3.3e-51 205.7 183 56.3
Mapoly0003s0233 Marchantia polymorpha HOM05D006321 ORTHO05D007929 5.7e-51 204.9 141 61.0
Pp3c22_13020 Physcomitrium patens HOM05D006321 ORTHO05D007929 9.7e-51 204.1 153 59.5
Migut.G01073 Erythranthe guttata HOM05D006321 ORTHO05D007929 6.3e-50 201.4 116 75.9
BcaB05g22329 Brassica carinata HOM05D006321 ORTHO05D007929 1.4e-49 200.3 157 68.8
Oeu044678.1 Olea europaea HOM05D006321 ORTHO05D007929 1.8e-49 199.9 113 76.1
Mapoly0003s0169 Marchantia polymorpha HOM05D006321 ORTHO05D007929 4.1e-49 198.7 141 59.6
Oeu030095.1 Olea europaea HOM05D006321 ORTHO05D007929 3.5e-48 195.7 115 74.8
FAN17G2672 Fragaria x ananassa HOM05D006321 ORTHO05D007929 1.0e-47 194.1 160 60.0
Aqoxy108s003 Aquilegia oxysepala HOM05D006321 ORTHO05D007929 1.5e-46 190.3 138 62.3
Peaxi162Scf00324g00017 Petunia axillaris HOM05D006321 ORTHO05D007929 9.4e-46 187.6 105 77.1
ATR1152G025 Amborella trichopoda HOM05D006321 ORTHO05D007929 3.6e-45 185.7 105 77.1
PSO541G2755 Papaver somniferum HOM05D006321 ORTHO05D007929 1.4e-44 183.7 113 69.9
Lj6A87G16 Lonicera japonica HOM05D006321 ORTHO05D007929 1.5e-43 180.3 94 81.9
DCAR_005801 Daucus carota HOM05D006321 ORTHO05D007929 2.0e-40 169.9 102 71.6
CBR_g19745 Chara braunii HOM05D006321 ORTHO05D007929 5.2e-36 155.2 132 56.1
COL.COLO4_32845 Corchorus olitorius HOM05D006321 ORTHO05D007929 5.2e-36 155.2 85 82.4
Dinv41168 Davidia involucrata HOM05D000015 ORTHO05D003525 1.4e-33 147.1 87 75.9
TAR629G2308 Trochodendron aralioides HOM05D006321 ORTHO05D007929 1.4e-33 147.1 135 54.1
Lj6A100T20 Lonicera japonica HOM05D006321 ORTHO05D007929 6.8e-28 128.3 73 78.1
BolC2t07570H Brassica oleracea HOM05D006321 ORTHO05D007929 3.8e-23 112.5 60 90.0
Sopen00g012850 Solanum pennellii HOM05D006321 ORTHO05D007929 4.9e-18 95.5 52 75.0
C02p14450 Brassica napus HOM05D006321 ORTHO05D007929 3.9e-15 85.9 70 64.3


User provided reference genes

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