Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT5G56850 Arabidopsis thaliana HOM05D006771 ORTHO05D008296 6.6e-267 923.7 544 100.0
AL8G32700 Arabidopsis lyrata HOM05D006771 ORTHO05D008296 1.1e-208 730.3 537 84.7
Sp6g18570 Schrenkiella parvula HOM05D006771 ORTHO05D008296 2.2e-177 626.3 542 69.4
Thhalv10013398m.g Eutrema salsugineum HOM05D006771 ORTHO05D008296 4.7e-172 608.6 538 68.4
Carub.0008s1731 Capsella rubella HOM05D006771 ORTHO05D008296 1.4e-163 580.5 497 69.8
A03p13130 Brassica napus HOM05D006771 ORTHO05D008296 6.6e-158 561.6 537 64.8
BcaB01g04422 Brassica carinata HOM05D006771 ORTHO05D008296 1.6e-156 557.0 536 64.6
BraA03t10624Z Brassica rapa HOM05D006771 ORTHO05D008296 3.9e-150 535.8 557 60.7
C03p15350 Brassica napus HOM05D006771 ORTHO05D008296 4.3e-149 532.3 536 62.3
BolC3t13977H Brassica oleracea HOM05D006771 ORTHO05D008296 1.6e-148 530.4 536 62.3
Aa31LG3G12750 Aethionema arabicum HOM05D006771 ORTHO05D008296 9.4e-80 302.0 439 50.1
Potri.006G151100 Populus trichocarpa HOM05D006771 ORTHO05D008296 1.0e-30 139.0 147 51.7
CiPaw.03G216900 Carya illinoinensis HOM05D006771 ORTHO05D008296 1.8e-30 138.3 549 27.5
Manes.03G033100 Manihot esculenta HOM05D006771 ORTHO05D008296 3.1e-30 137.5 128 56.2
Gohir.A07G010700 Gossypium hirsutum HOM05D006771 ORTHO05D008296 2.0e-29 134.8 152 47.4
Eucgr.C03893 Eucalyptus grandis HOM05D006771 ORTHO05D008296 3.4e-29 134.0 131 51.1
Eucgr.C03649 Eucalyptus grandis HOM05D006771 ORTHO05D008296 1.7e-28 131.7 131 50.4
Duzib187G1830 Durio zibethinus HOM05D006771 ORTHO05D008296 6.4e-28 129.8 593 29.0
GSVIVG01015209001 Vitis vinifera HOM05D006771 ORTHO05D008296 2.4e-27 127.9 332 32.8
Duzib168G0935 Durio zibethinus HOM05D006771 ORTHO05D008296 3.2e-27 127.5 245 38.0
Thecc.09G090100 Theobroma cacao HOM05D006771 ORTHO05D008296 3.2e-27 127.5 600 28.0
Gohir.A06G072300 Gossypium hirsutum HOM05D006771 ORTHO05D008296 4.1e-27 127.1 222 41.0
Gohir.D07G011000 Gossypium hirsutum HOM05D006771 ORTHO05D008296 5.4e-27 126.7 182 42.9
Gorai.001G011400 Gossypium raimondii HOM05D006771 ORTHO05D008296 5.4e-27 126.7 182 42.9
TAR624G0646 Trochodendron aralioides HOM05D006771 ORTHO05D008296 7.0e-27 126.3 137 50.4
MD15G1206500 Malus domestica HOM05D006771 ORTHO05D008296 1.6e-26 125.2 166 44.6
CANSAT56G0603 Cannabis sativa HOM05D006771 ORTHO05D008296 2.7e-26 124.4 548 27.4
Dinv36762 Davidia involucrata HOM05D006771 ORTHO05D008296 6.0e-26 123.2 215 37.2
Migut.L01489 Erythranthe guttata HOM05D006771 ORTHO05D008296 1.3e-25 122.1 236 37.3
SalBow1G1031 Salvia bowleyana HOM05D006771 ORTHO05D008296 1.3e-25 122.1 124 51.6
Ciclev10010605m.g Citrus clementina HOM05D006771 ORTHO05D008296 1.7e-25 121.7 244 35.7
Atru.chr7.1582 Acer truncatum HOM05D006771 ORTHO05D008296 2.3e-25 121.3 238 38.2
Actinidia29883 Actinidia chinensis HOM05D006771 ORTHO05D008296 3.9e-25 120.6 137 48.2
Glyma.09G062700 Glycine max HOM05D006771 ORTHO05D008296 3.9e-25 120.6 183 41.0
Sabra06G0119600 Salix brachista HOM05D006771 ORTHO05D008296 3.9e-25 120.6 125 52.0
COL.COLO4_18206 Corchorus olitorius HOM05D006771 ORTHO05D008296 2.5e-24 117.9 231 38.1
FAN26G2123 Fragaria x ananassa HOM05D006771 ORTHO05D008296 7.3e-24 116.3 239 37.2
Lalb_Chr08g0232051 Lupinus albus HOM05D006771 ORTHO05D008296 9.5e-24 115.9 156 45.5
Ca_02153_v3 Cicer arietinum L. HOM05D006771 ORTHO05D008296 1.6e-23 115.2 250 36.8
Aqoxy7G01223_Aqoxy7G01224 Aquilegia oxysepala HOM05D006771 ORTHO05D008296 2.1e-23 114.8 142 43.7
FAN26G3254 Fragaria x ananassa HOM05D006771 ORTHO05D008296 4.7e-23 113.6 242 36.8
TWI63G0991 Tripterygium wilfordii HOM05D006771 ORTHO05D008296 8.1e-23 112.8 332 31.3
Glyma.15G169200 Glycine max HOM05D006771 ORTHO05D008296 1.4e-22 112.1 243 35.0
Nn8g38880 Nelumbo nucifera HOM05D006771 ORTHO05D008296 1.4e-22 112.1 253 35.2
Sc18g0002030 Simmondsia chinensis HOM05D006771 ORTHO05D008296 1.4e-22 112.1 146 43.2
Gohir.D06G070900 Gossypium hirsutum HOM05D006771 ORTHO05D008296 4.0e-22 110.5 597 26.6
vmacro23430 Vaccinium macrocarpon HOM05D006771 ORTHO05D008296 4.0e-22 110.5 238 37.0
Ah.14g085210 Amaranthus hybridus HOM05D006771 ORTHO05D008296 5.2e-22 110.2 130 44.6
PGR102G2735 Punica granatum HOM05D006771 ORTHO05D008296 6.8e-22 109.8 576 25.2
ClCG11G001770 Citrullus lanatus HOM05D006771 ORTHO05D008296 8.9e-22 109.4 531 26.6
TPR.G35458 Trifolium pratense HOM05D006771 ORTHO05D008296 1.5e-21 108.6 561 26.4
CsaV3_2G001480 Cucumis sativus L. HOM05D006771 ORTHO05D008296 2.0e-21 108.2 490 26.9
PSO832G0455 Papaver somniferum HOM05D006771 ORTHO05D008296 2.0e-21 108.2 242 32.6
DCAR_024688 Daucus carota HOM05D006771 ORTHO05D008296 2.6e-21 107.8 243 33.7
arahy.Tifrunner.gnm1.ann1.H0G9IY Arachis hypogaea HOM05D006771 ORTHO05D008296 3.4e-21 107.5 545 25.9
Nitab4.5_0005033g0010 Nicotiana tabacum HOM05D006771 ORTHO05D008296 3.4e-21 107.5 228 36.0
Phvul.009G232800 Phaseolus vulgaris HOM05D006771 ORTHO05D008296 3.4e-21 107.5 368 31.8
Cfa003093 Carpinus fangiana HOM05D006771 ORTHO05D008296 4.4e-21 107.1 384 30.5
Cc06_g11360 Coffea canephora HOM05D006771 ORTHO05D008296 5.8e-21 106.7 258 33.7
RcHm_v2.0_Chr2g0093251 Rosa chinensis HOM05D006771 ORTHO05D008296 5.8e-21 106.7 246 32.9
vmacro06287 Vaccinium macrocarpon HOM05D006771 ORTHO05D008296 5.8e-21 106.7 247 34.4
arahy.Tifrunner.gnm1.ann1.LUTY24 Arachis hypogaea HOM05D006771 ORTHO05D008296 9.8e-21 105.9 569 24.3
Gorai.010G082600 Gossypium raimondii HOM05D006771 ORTHO05D008296 9.8e-21 105.9 607 26.2
ECA234G3532 Erigeron canadensis HOM05D006771 ORTHO05D008296 1.7e-20 105.1 206 33.5
DCAR_031968 Daucus carota HOM05D006771 ORTHO05D008296 6.4e-20 103.2 216 39.4
CAN.G235.1 Capsicum annuum HOM05D006771 ORTHO05D008296 8.3e-20 102.8 226 33.6
PSO063G0725 Papaver somniferum HOM05D006771 ORTHO05D008296 8.3e-20 102.8 210 31.9
SEGI_22775 Sequoiadendron giganteum HOM05D006771 ORTHO05D008296 8.3e-20 102.8 175 38.3
HanXRQChr12g0354831 Helianthus annuus HOM05D006771 ORTHO05D008296 2.4e-19 101.3 250 31.6
Psat1g141720 Pisum sativum HOM05D006771 ORTHO05D008296 3.2e-19 100.9 563 24.9
PGSC0003DMG401013152 Solanum tuberosum HOM05D006771 ORTHO05D008296 4.1e-19 100.5 241 35.3
FAN19G1581 Fragaria x ananassa HOM05D006771 ORTHO05D008296 1.2e-18 99.0 118 50.0
QL02p062800 Quercus lobata HOM05D006771 ORTHO05D008296 2.7e-18 97.8 573 25.5
FvH4_1g07370 Fragaria vesca HOM05D006771 ORTHO05D008296 4.6e-18 97.1 567 27.0
Peaxi162Scf01121g00112 Petunia axillaris HOM05D006771 ORTHO05D008296 4.6e-18 97.1 236 33.9
CDE06G0351 Ceratophyllum demersum HOM05D006771 ORTHO05D008296 6.0e-18 96.7 236 29.7
SGA_v2.0_scaffold21G09363 Striga asiatica HOM05D006771 ORTHO05D008296 6.0e-18 96.7 128 47.7
Prupe.7G210300 Prunus persica HOM05D006771 ORTHO05D008296 7.8e-18 96.3 567 26.5
HanXRQChr10g0319291 Helianthus annuus HOM05D006771 ORTHO05D008296 1.0e-17 95.9 248 30.2
Medtr2g038710 Medicago truncatula HOM05D006771 ORTHO05D008296 1.3e-17 95.5 587 24.2
AUR62027498 Chenopodium quinoa HOM05D006771 ORTHO05D008296 1.7e-17 95.1 150 37.3
Lsat_1_v5_gn_5_142241 Lactuca sativa HOM05D006771 ORTHO05D008296 1.7e-17 95.1 141 38.3
Nitab4.5_0005634g0020 Nicotiana tabacum HOM05D006771 ORTHO05D008296 3.0e-17 94.4 217 33.2
FAN23G2606 Fragaria x ananassa HOM05D006771 ORTHO05D008296 4.3e-16 90.5 555 25.8
FAN28G0978 Fragaria x ananassa HOM05D006771 ORTHO05D008296 7.3e-16 89.7 596 26.5
Oeu042645.4 Olea europaea HOM05D006771 ORTHO05D008296 9.5e-16 89.4 580 26.2
Sed0013958 Sechium edule HOM05D006771 ORTHO05D008296 3.6e-15 87.4 542 25.6
Solyc07g039190.4 Solanum lycopersicum HOM05D006771 ORTHO05D008296 4.7e-15 87.0 607 27.8
unitig_699.g19301 Utricularia gibba HOM05D006771 ORTHO05D008296 5.2e-14 83.6 76 50.0
Lj6g0004334 Lotus japonicus HOM05D006771 ORTHO05D008296 1.2e-13 82.4 244 29.5
Pp3c15_7000 Physcomitrium patens HOM05D006771 ORTHO05D008296 5.8e-13 80.1 143 35.7
Hund06680 Selenicereus undatus HOM05D006771 ORTHO05D008296 5.8e-13 80.1 173 33.5
AagrBONN_evm.TU.Sc2ySwM_344.5001 Anthoceros agrestis HOM05D062329 ORTHO05D008296 9.9e-13 79.3 126 34.9
Cpa.g.sc93.24 Carica papaya HOM05D006771 ORTHO05D008296 9.9e-13 79.3 577 25.5
Os05g0232200 Oryza sativa ssp. japonica HOM05D006771 ORTHO05D008296 1.7e-12 78.6 227 27.3
MBI04_g34126_MAGBIO Magnolia biondii HOM05D006771 ORTHO05D008296 4.9e-12 77.0 200 34.0
Zm00001eb345250 Zea mays HOM05D006771 ORTHO05D008296 1.6e-10 72.0 186 29.0
Pp3c9_2800 Physcomitrium patens HOM05D006771 ORTHO05D008296 1.7e-09 68.6 140 32.1
Pp3c9_2809 Physcomitrium patens HOM05D006771 ORTHO05D008296 1.7e-09 68.6 140 32.1
ATR0716G111 Amborella trichopoda HOM05D006771 ORTHO05D008296 8.6e-09 66.2 82 39.0
Haze_25906 Corylus avellana HOM05D006771 ORTHO05D008296 1.5e-08 65.5 83 47.0
Mapoly0003s0143 Marchantia polymorpha HOM05D006771 ORTHO05D008296 3.3e-08 64.3 127 29.9


User provided reference genes

Program Settings