Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT5G53860 Arabidopsis thaliana HOM05D006845 ORTHO05D009300 2.7e-252 874.8 423 100.0
AL8G28920 Arabidopsis lyrata HOM05D006845 ORTHO05D009300 1.4e-248 862.4 423 98.3
CARHR266990 Cardamine hirsuta HOM05D006845 ORTHO05D009300 9.1e-240 833.2 423 94.6
Carub.0008s1415 Capsella rubella HOM05D006845 ORTHO05D009300 1.2e-239 832.8 423 93.6
C09p43870 Brassica napus HOM05D006845 ORTHO05D009300 1.5e-239 832.4 423 94.6
A10p11250 Brassica napus HOM05D006845 ORTHO05D009300 5.9e-239 830.5 423 94.3
Thhalv10013651m.g Eutrema salsugineum HOM05D006845 ORTHO05D009300 1.0e-238 829.7 423 93.4
Sp6g15920 Schrenkiella parvula HOM05D006845 ORTHO05D009300 6.5e-238 827.0 423 93.9
BcaC04g20411 Brassica carinata HOM05D006845 ORTHO05D009300 1.1e-237 826.2 423 94.1
BcaB08g35745 Brassica carinata HOM05D006845 ORTHO05D009300 4.2e-237 824.3 423 93.4
Aa31LG3G10070 Aethionema arabicum HOM05D006845 ORTHO05D009300 3.8e-222 774.6 402 92.0
BolC9t57269H Brassica oleracea HOM05D006845 ORTHO05D009300 4.7e-220 767.7 434 86.9
BraA10t43218Z Brassica rapa HOM05D006845 ORTHO05D009300 5.7e-218 760.8 468 81.6
THA.LOC104811867 Tarenaya hassleriana HOM05D006845 ORTHO05D009300 9.1e-216 753.4 423 85.3
Thecc.07G091800 Theobroma cacao HOM05D006845 ORTHO05D009300 2.2e-209 732.3 423 79.9
Gohir.D08G031900 Gossypium hirsutum HOM05D006845 ORTHO05D009300 7.8e-207 723.8 423 78.7
Gohir.A08G021200 Gossypium hirsutum HOM05D006845 ORTHO05D009300 3.8e-206 721.5 423 78.5
Gorai.004G029400 Gossypium raimondii HOM05D006845 ORTHO05D009300 3.3e-205 718.4 423 78.3
PGR083G0376 Punica granatum HOM05D006845 ORTHO05D009300 8.0e-204 713.8 423 78.5
Prupe.4G179900 Prunus persica HOM05D006845 ORTHO05D009300 1.8e-203 712.6 423 77.5
Manes.15G087900 Manihot esculenta HOM05D006845 ORTHO05D009300 1.2e-202 709.9 423 78.3
Eucgr.F01150 Eucalyptus grandis HOM05D006845 ORTHO05D009300 9.8e-202 706.8 424 77.1
CANSAT56G3540 Cannabis sativa HOM05D006845 ORTHO05D009300 1.2e-199 699.9 426 75.8
CSS0022560 Camellia sinensis var. sinensis HOM05D006845 ORTHO05D009300 2.0e-199 699.1 425 74.6
Potri.001G398900 Populus trichocarpa HOM05D006845 ORTHO05D009300 3.5e-199 698.4 409 78.5
GSVIVG01014313001 Vitis vinifera HOM05D006845 ORTHO05D009300 4.6e-199 698.0 424 75.5
Potri.011G118000 Populus trichocarpa HOM05D006845 ORTHO05D009300 1.0e-198 696.8 421 75.8
COL.COLO4_27185 Corchorus olitorius HOM05D006845 ORTHO05D009300 1.3e-198 696.4 423 75.4
Ciclev10008389m.g Citrus clementina HOM05D006845 ORTHO05D009300 2.3e-198 695.7 427 75.6
Nn1g06500 Nelumbo nucifera HOM05D006845 ORTHO05D009300 3.0e-198 695.3 423 74.7
Atru.chr2.2481 Acer truncatum HOM05D006845 ORTHO05D009300 8.6e-198 693.7 412 78.2
QL08p022228 Quercus lobata HOM05D006845 ORTHO05D009300 1.5e-197 693.0 422 75.1
RcHm_v2.0_Chr5g0033181 Rosa chinensis HOM05D006845 ORTHO05D009300 1.9e-197 692.6 417 75.8
MD11G1250000 Malus domestica HOM05D006845 ORTHO05D009300 4.3e-197 691.4 420 74.8
Solyc12g013890.2 Solanum lycopersicum HOM05D006845 ORTHO05D009300 5.6e-197 691.0 425 74.4
Sopen12g007210 Solanum pennellii HOM05D006845 ORTHO05D009300 7.3e-197 690.6 425 74.1
ClCG11G018010 Citrullus lanatus HOM05D006845 ORTHO05D009300 3.6e-196 688.3 412 76.0
CiPaw.11G170600 Carya illinoinensis HOM05D006845 ORTHO05D009300 6.2e-196 687.6 423 75.4
Dinv14926 Davidia involucrata HOM05D006845 ORTHO05D009300 2.3e-195 685.6 420 74.8
FvH4_3g19780 Fragaria vesca HOM05D006845 ORTHO05D009300 5.2e-195 684.5 417 75.3
TAR627G0110 Trochodendron aralioides HOM05D006845 ORTHO05D009300 1.2e-194 683.3 424 72.4
CsaV3_4G033630 Cucumis sativus L. HOM05D006845 ORTHO05D009300 4.4e-194 681.4 423 73.8
Sed0008037 Sechium edule HOM05D006845 ORTHO05D009300 7.5e-194 680.6 423 74.0
Lalb_Chr25g0286311 Lupinus albus HOM05D006845 ORTHO05D009300 2.2e-193 679.1 416 76.0
Cfa020572 Carpinus fangiana HOM05D006845 ORTHO05D009300 4.9e-193 677.9 417 76.3
Hma1.2p1_0898F.1_g234490 Hydrangea macrophylla HOM05D006845 ORTHO05D009300 6.4e-193 677.6 407 75.9
CAN.G213.11 Capsicum annuum HOM05D006845 ORTHO05D009300 1.1e-192 676.8 410 75.6
MELO3C016692.2 Cucumis melo HOM05D006845 ORTHO05D009300 4.1e-192 674.9 417 72.9
Lj3g0006633 Lotus japonicus HOM05D006845 ORTHO05D009300 5.4e-192 674.5 417 75.8
TWI39G1089 Tripterygium wilfordii HOM05D006845 ORTHO05D009300 5.4e-192 674.5 423 74.0
Glyma.12G225400 Glycine max HOM05D006845 ORTHO05D009300 1.2e-191 673.3 423 74.5
MD03G1229200 Malus domestica HOM05D006845 ORTHO05D009300 1.6e-191 672.9 421 74.6
PSO541G3085 Papaver somniferum HOM05D006845 ORTHO05D009300 4.6e-191 671.4 424 71.2
PSO675G5588 Papaver somniferum HOM05D006845 ORTHO05D009300 4.6e-191 671.4 424 71.0
arahy.Tifrunner.gnm1.ann1.61G52X Arachis hypogaea HOM05D006845 ORTHO05D009300 5.0e-190 667.9 417 73.4
AUR62039192 Chenopodium quinoa HOM05D006845 ORTHO05D009300 1.1e-189 666.8 424 71.7
Glyma.13G275900 Glycine max HOM05D006845 ORTHO05D009300 1.1e-189 666.8 423 74.0
MSTRG.14352 Avicennia marina HOM05D006845 ORTHO05D009300 1.5e-189 666.4 425 71.1
arahy.Tifrunner.gnm1.ann1.ME6152 Arachis hypogaea HOM05D006845 ORTHO05D009300 2.8e-188 662.1 417 72.7
Migut.H01945 Erythranthe guttata HOM05D006845 ORTHO05D009300 2.8e-188 662.1 425 69.9
Oeu051072.2 Olea europaea HOM05D006845 ORTHO05D009300 8.1e-188 660.6 450 69.6
FAN11G1119 Fragaria x ananassa HOM05D006845 ORTHO05D009300 1.8e-187 659.4 411 74.5
EL10Ac4g08199 Beta vulgaris HOM05D006845 ORTHO05D009300 4.4e-186 654.8 423 70.0
AUR62019438 Chenopodium quinoa HOM05D006845 ORTHO05D009300 5.8e-186 654.4 412 71.6
Duzib213G0603 Durio zibethinus HOM05D006845 ORTHO05D009300 1.3e-185 653.3 423 71.9
FAN21G2917 Fragaria x ananassa HOM05D006845 ORTHO05D009300 1.3e-185 653.3 426 71.6
VMungo1080G1688 Vigna mungo HOM05D006845 ORTHO05D009300 1.7e-185 652.9 424 73.1
HanXRQChr12g0364151 Helianthus annuus HOM05D006845 ORTHO05D009300 1.1e-184 650.2 424 69.3
Aqoxy1G02380 Aquilegia oxysepala HOM05D006845 ORTHO05D009300 3.2e-184 648.7 403 72.5
Phvul.005G073100 Phaseolus vulgaris HOM05D006845 ORTHO05D009300 7.8e-183 644.0 417 72.9
DCAR_017135 Daucus carota HOM05D006845 ORTHO05D009300 3.9e-182 641.7 407 71.0
Nitab4.5_0003378g0090 Nicotiana tabacum HOM05D006845 ORTHO05D009300 1.1e-181 640.2 425 70.4
Actinidia18770 Actinidia chinensis HOM05D006845 ORTHO05D009300 5.6e-181 637.9 387 73.6
FAN25G1923 Fragaria x ananassa HOM05D006845 ORTHO05D009300 9.5e-181 637.1 417 71.0
Peaxi162Scf00000g00345 Petunia axillaris HOM05D006845 ORTHO05D009300 5.2e-179 631.3 425 69.9
CDE02G1035 Ceratophyllum demersum HOM05D006845 ORTHO05D009300 1.2e-178 630.2 423 67.8
Sabra16G0261500 Salix brachista HOM05D006845 ORTHO05D009300 1.5e-178 629.8 540 58.9
Lsat_1_v5_gn_9_97520 Lactuca sativa HOM05D006845 ORTHO05D009300 3.8e-177 625.2 418 68.7
ATR0737G060 Amborella trichopoda HOM05D006845 ORTHO05D009300 7.8e-175 617.5 422 66.4
FAN16G0640 Fragaria x ananassa HOM05D006845 ORTHO05D009300 8.7e-174 614.0 411 70.6
Ca_03508_v3 Cicer arietinum L. HOM05D006845 ORTHO05D009300 4.4e-170 601.7 419 68.5
SGA_v2.0_scaffold70G23678 Striga asiatica HOM05D006845 ORTHO05D009300 5.8e-170 601.3 409 68.5
Ah.06g184430 Amaranthus hybridus HOM05D006845 ORTHO05D009300 3.0e-166 589.0 414 67.6
HPP92_003615 Vanilla planifolia HOM05D006845 ORTHO05D009300 3.3e-165 585.5 422 63.5
Nitab4.5_0000332g0060 Nicotiana tabacum HOM05D006845 ORTHO05D009300 5.6e-165 584.7 453 62.7
Medtr2g079060 Medicago truncatula HOM05D006845 ORTHO05D009300 1.1e-157 560.5 413 66.1
Psat5g242160 Pisum sativum HOM05D006845 ORTHO05D009300 2.0e-154 549.7 401 65.1
Actinidia35244 Actinidia chinensis HOM05D006845 ORTHO05D009300 2.2e-153 546.2 414 62.1
TPR.G7949 Trifolium pratense HOM05D006845 ORTHO05D009300 1.9e-149 533.1 364 68.7
Lj1C841T8 Lonicera japonica HOM05D006845 ORTHO05D009300 9.0e-147 524.2 371 66.3
Sc16g0007040 Simmondsia chinensis HOM05D006845 ORTHO05D009300 1.9e-144 516.5 312 75.6
Cpa.g.sc80.77 Carica papaya HOM05D006845 ORTHO05D009300 7.4e-141 504.6 423 60.3
Haze_09439 Corylus avellana HOM05D006845 ORTHO05D009300 1.6e-140 503.4 380 64.7
ECA240G2176 Erigeron canadensis HOM05D006845 ORTHO05D009300 2.4e-139 499.6 313 72.2
BcaB07g33336 Brassica carinata HOM05D006845 ORTHO05D009300 1.7e-108 397.1 204 91.7
Cc05_g11930 Coffea canephora HOM05D006845 ORTHO05D009300 2.8e-92 343.2 214 71.0
SEGI_13558 Sequoiadendron giganteum HOM05D006845 ORTHO05D009300 5.4e-91 339.0 346 43.6
Pp3c1_32740 Physcomitrium patens HOM05D006845 ORTHO05D009300 1.8e-86 323.9 345 45.2
Cc05_g11920 Coffea canephora HOM05D006845 ORTHO05D009300 5.8e-85 318.9 204 72.5
AagrBONN_evm.TU.Sc2ySwM_344.572 Anthoceros agrestis HOM05D006845 ORTHO05D009300 7.5e-85 318.5 376 41.5
Mapoly0037s0133 Marchantia polymorpha HOM05D006845 ORTHO05D009300 4.3e-72 276.2 347 37.5
SMO143G0137 Selaginella moellendorffii HOM05D006845 ORTHO05D009300 7.3e-64 248.8 280 43.9
unitig_899.g15568 Utricularia gibba HOM05D006845 ORTHO05D009300 9.9e-45 185.3 106 77.4
BcaB04g16942 Brassica carinata HOM05D006845 ORTHO05D009300 2.0e-37 161.0 139 64.7
Sabra11G0103000 Salix brachista HOM05D006845 ORTHO05D009300 4.9e-36 156.4 85 82.4
Lsat_1_v5_gn_7_87221 Lactuca sativa HOM05D003066 ORTHO05D004162 1.9e-35 154.5 103 65.0
Lsat_1_v5_gn_4_31781 Lactuca sativa HOM05D006845 ORTHO05D014206 1.8e-33 147.9 106 62.3
Lsat_1_v5_gn_5_134240 Lactuca sativa HOM05D006845 ORTHO05D014206 1.8e-33 147.9 106 62.3
Lsat_1_v5_gn_7_62660 Lactuca sativa HOM05D006845 ORTHO05D014206 6.7e-33 146.0 103 62.1
FAN12G2298 Fragaria x ananassa HOM05D006845 ORTHO05D014206 1.6e-10 71.6 49 63.3
FAN25G3098 Fragaria x ananassa HOM05D006845 ORTHO05D014206 1.0e-09 68.9 49 61.2
FAN05G4902 Fragaria x ananassa HOM05D006845 ORTHO05D014206 1.4e-09 68.6 50 60.0
MBI02_g32976_MAGBIO Magnolia biondii HOM05D000872 ORTHO05D014206 2.6e-08 64.3 45 62.2
Hma1.2p1_0554F.1_g177810 Hydrangea macrophylla HOM05D006845 ORTHO05D014206 4.8e-07 60.1 46 58.7
FAN09G2373 Fragaria x ananassa HOM05D006845 ORTHO05D014206 8.2e-07 59.3 48 54.2


User provided reference genes

Program Settings