Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT5G53592 Arabidopsis thaliana HOM05D000051 ORTHO05D000015 1.5e-56 222.6 112 100.0
AL8G28370 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 1.7e-28 129.4 86 75.6
AL8G28360 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 1.2e-26 123.2 88 71.6
AL8G28380 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 5.9e-21 104.4 85 71.8
AL8G28350 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 4.0e-17 91.7 86 66.3
Carub.0008s1387 Capsella rubella HOM05D000051 ORTHO05D000015 6.3e-15 84.3 114 53.5
Carub.0008s1388 Capsella rubella HOM05D000051 ORTHO05D000015 3.1e-14 82.0 111 47.7
BolC3t14205H Brassica oleracea HOM05D000051 ORTHO05D000015 7.0e-14 80.9 87 57.5
A03p15410 Brassica napus HOM05D000051 ORTHO05D000015 9.1e-14 80.5 100 54.0
C03p17990 Brassica napus HOM05D000051 ORTHO05D000015 9.1e-14 80.5 100 54.0
BraA03t10831Z Brassica rapa HOM05D000051 ORTHO05D000015 9.1e-14 80.5 100 54.0
BolC9t57236H Brassica oleracea HOM05D000051 ORTHO05D000015 7.7e-13 77.4 91 54.9
BcaB01g04216 Brassica carinata HOM05D000051 ORTHO05D000015 2.2e-12 75.9 84 57.1
Thhalv10013520m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 2.9e-12 75.5 94 44.7
C09p43510 Brassica napus HOM05D000051 ORTHO05D000015 5.0e-12 74.7 88 47.7
A05p27190 Brassica napus HOM05D000051 ORTHO05D000015 8.5e-12 73.9 99 51.5
A10p11070 Brassica napus HOM05D000051 ORTHO05D000015 8.5e-12 73.9 88 52.3
BraA05t21608Z Brassica rapa HOM05D000051 ORTHO05D000015 8.5e-12 73.9 99 51.5
AL3G39560 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 1.5e-11 73.2 111 45.0
C09p43550 Brassica napus HOM05D000051 ORTHO05D000015 2.5e-11 72.4 88 52.3
Thhalv10013489m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 2.5e-11 72.4 106 48.1
CARHR284830 Cardamine hirsuta HOM05D000051 ORTHO05D000015 4.2e-11 71.6 117 41.9
BcaC05g28161 Brassica carinata HOM05D000051 ORTHO05D000015 5.5e-11 71.2 99 50.5
C05p41970 Brassica napus HOM05D000051 ORTHO05D000015 5.5e-11 71.2 99 50.5
BolC5t32931H Brassica oleracea HOM05D000051 ORTHO05D000015 5.5e-11 71.2 99 50.5
Carub.0004s0141 Capsella rubella HOM05D000051 ORTHO05D000015 5.5e-11 71.2 89 51.7
AT3G23955 Arabidopsis thaliana HOM05D000051 ORTHO05D000015 7.2e-11 70.9 72 55.6
Thhalv10015300m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 7.2e-11 70.9 88 48.9
AL8G28580 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 9.4e-11 70.5 116 41.4
Sp6g15230 Schrenkiella parvula HOM05D000051 ORTHO05D000015 9.4e-11 70.5 117 46.2
BraA10t43199Z Brassica rapa HOM05D000051 ORTHO05D000015 2.7e-10 68.9 87 46.0
Carub.0008s1381 Capsella rubella HOM05D000051 ORTHO05D000015 3.6e-10 68.6 116 43.1
Thhalv10001850m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 3.6e-10 68.6 78 53.8
Carub.0008s1384 Capsella rubella HOM05D000051 ORTHO05D000015 4.7e-10 68.2 93 47.3
C03p18000 Brassica napus HOM05D000051 ORTHO05D000015 8.0e-10 67.4 92 47.8
Thhalv10001812m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 8.0e-10 67.4 72 55.6
BcaB05g22062 Brassica carinata HOM05D000051 ORTHO05D000015 1.4e-09 66.6 84 50.0
AT5G53637 Arabidopsis thaliana HOM05D000051 ORTHO05D000015 3.0e-09 65.5 119 43.7
AL8G28500 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 4.0e-09 65.1 114 41.2
AL8G28590 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 4.0e-09 65.1 72 55.6
Carub.0006s2044 Capsella rubella HOM05D000051 ORTHO05D000015 8.8e-09 63.9 110 40.0
AL8G28490 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 1.2e-08 63.5 91 44.0
AT5G22730 Arabidopsis thaliana HOM05D000051 ORTHO05D000015 1.2e-08 63.5 115 40.0
AT5G53635 Arabidopsis thaliana HOM05D000051 ORTHO05D000015 1.5e-08 63.2 72 52.8
A02p10940 Brassica napus HOM05D000051 ORTHO05D000015 1.5e-08 63.2 84 47.6
C02p18150 Brassica napus HOM05D000051 ORTHO05D000015 1.5e-08 63.2 84 47.6
BraA02t06159Z Brassica rapa HOM05D000051 ORTHO05D000015 1.5e-08 63.2 84 47.6
BcaC03g14400 Brassica carinata HOM05D000051 ORTHO05D000015 7.5e-08 60.8 84 46.4
BolC2t07945H Brassica oleracea HOM05D000051 ORTHO05D000015 7.5e-08 60.8 84 46.4
AL6G33720 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 9.8e-08 60.5 110 35.5
Thhalv10015239m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 9.8e-08 60.5 72 47.2
Carub.0008s0328 Capsella rubella HOM05D000051 ORTHO05D000015 3.7e-07 58.5 90 41.1
Carub.0008s1378 Capsella rubella HOM05D000051 ORTHO05D000015 3.7e-07 58.5 112 41.1
Thhalv10015873m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 4.8e-07 58.2 113 38.9
Thhalv10015301m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 8.3e-07 57.4 74 44.6
AL6G33690 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 1.1e-06 57.0 111 37.8
BcaB08g35731 Brassica carinata HOM05D000051 ORTHO05D000015 1.1e-06 57.0 103 39.8
BraA03t10395Z Brassica rapa HOM05D000051 ORTHO05D000015 2.4e-06 55.8 118 33.1
Carub.0002s1227 Capsella rubella HOM05D000051 ORTHO05D000015 3.1e-06 55.5 70 47.1
Carub.0008s1393 Capsella rubella HOM05D000051 ORTHO05D000015 3.1e-06 55.5 73 42.5
Thhalv10015350m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 3.1e-06 55.5 74 43.2
BcaC01g06573 Brassica carinata HOM05D000051 ORTHO05D000015 4.1e-06 55.1 118 33.1
C03p12490 Brassica napus HOM05D000051 ORTHO05D000015 4.1e-06 55.1 118 33.1
C06p52640 Brassica napus HOM05D000051 ORTHO05D000015 4.1e-06 55.1 73 46.6
BolC6t40283H Brassica oleracea HOM05D000051 ORTHO05D000015 4.1e-06 55.1 73 46.6
CARHR190860 Cardamine hirsuta HOM05D000051 ORTHO05D000015 4.1e-06 55.1 70 44.3
AT5G22670 Arabidopsis thaliana HOM05D000051 ORTHO05D000015 5.4e-06 54.7 111 38.7
A03p10850 Brassica napus HOM05D000051 ORTHO05D000015 5.4e-06 54.7 118 33.1
BraA03t10394Z Brassica rapa HOM05D000051 ORTHO05D000015 5.4e-06 54.7 72 47.2
CARHR190910 Cardamine hirsuta HOM05D000051 ORTHO05D000015 5.4e-06 54.7 109 37.6
C05p15180 Brassica napus HOM05D000051 ORTHO05D000015 7.0e-06 54.3 74 47.3


User provided reference genes

Program Settings