Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT5G52760 Arabidopsis thaliana HOM05D000607 ORTHO05D010164 6.7e-47 190.3 92 100.0
AL8G27190 Arabidopsis lyrata HOM05D000607 ORTHO05D010164 2.0e-35 152.1 97 80.4
CARHR265680 Cardamine hirsuta HOM05D000607 ORTHO05D010164 2.2e-26 122.1 94 66.0
A02p11650 Brassica napus HOM05D000607 ORTHO05D010164 2.7e-24 115.2 94 66.0
BraA02t06228Z Brassica rapa HOM05D000607 ORTHO05D010164 8.0e-24 113.6 94 64.9
AL8G27180 Arabidopsis lyrata HOM05D000607 ORTHO05D010164 4.4e-22 107.8 104 59.6
Aa31LG3G9000 Aethionema arabicum HOM05D000607 ORTHO05D010164 1.7e-21 105.9 93 61.3
Aa31LG3G8990 Aethionema arabicum HOM05D000607 ORTHO05D010164 4.8e-21 104.4 93 61.3
A02p11640 Brassica napus HOM05D000607 ORTHO05D010164 6.3e-21 104.0 99 60.6
Carub.0008s1292 Capsella rubella HOM05D000607 ORTHO05D010164 1.8e-20 102.4 102 58.8
Carub.0008s1293 Capsella rubella HOM05D000607 ORTHO05D010164 1.8e-20 102.4 93 60.2
AT5G52750 Arabidopsis thaliana HOM05D000607 ORTHO05D010164 2.4e-20 102.1 104 57.7
Carub.0008s1289 Capsella rubella HOM05D000607 ORTHO05D010164 1.2e-19 99.8 107 56.1
Carub.0008s1290 Capsella rubella HOM05D000607 ORTHO05D010164 1.6e-19 99.4 96 60.4
Carub.0008s1291 Capsella rubella HOM05D000607 ORTHO05D010164 2.0e-19 99.0 102 56.9
Aa31LG3G9010 Aethionema arabicum HOM05D000607 ORTHO05D010164 2.7e-19 98.6 113 50.4
BcaB05g21974 Brassica carinata HOM05D000607 ORTHO05D010164 1.0e-18 96.7 99 57.6
Sp6g14900 Schrenkiella parvula HOM05D000607 ORTHO05D010164 1.5e-17 92.8 99 56.6
Sp6g14880 Schrenkiella parvula HOM05D000607 ORTHO05D010164 1.9e-17 92.4 99 56.6
BcaB05g21973 Brassica carinata HOM05D000607 ORTHO05D010164 2.5e-17 92.0 91 59.3
C02p19470 Brassica napus HOM05D000607 ORTHO05D010164 2.5e-17 92.0 99 56.6
BcaC03g14511 Brassica carinata HOM05D000607 ORTHO05D010164 7.2e-17 90.5 99 55.6
C02p19460 Brassica napus HOM05D000607 ORTHO05D010164 1.2e-16 89.7 73 63.0
BolC2t08080H Brassica oleracea HOM05D000607 ORTHO05D010164 1.2e-16 89.7 73 63.0
BcaB01g04211 Brassica carinata HOM05D000607 ORTHO05D010164 2.1e-16 89.0 97 57.7
BcaC03g14502 Brassica carinata HOM05D000607 ORTHO05D010164 2.8e-16 88.6 72 56.9
BcaC03g14506 Brassica carinata HOM05D000607 ORTHO05D010164 2.8e-16 88.6 99 54.5
A10p10240 Brassica napus HOM05D000607 ORTHO05D010164 3.6e-16 88.2 104 53.8
BraA10t43103Z Brassica rapa HOM05D000607 ORTHO05D010164 3.6e-16 88.2 104 53.8
BcaB08g35624 Brassica carinata HOM05D000607 ORTHO05D010164 4.7e-16 87.8 104 53.8
A02p11630 Brassica napus HOM05D000607 ORTHO05D010164 4.7e-16 87.8 79 53.2
BolC2t08079H Brassica oleracea HOM05D000607 ORTHO05D010164 4.7e-16 87.8 100 52.0
BraA10t43102Z Brassica rapa HOM05D000607 ORTHO05D010164 4.7e-16 87.8 104 53.8
BcaC04g20552 Brassica carinata HOM05D000607 ORTHO05D010164 8.0e-16 87.0 104 53.8
C09p42220 Brassica napus HOM05D000607 ORTHO05D010164 8.0e-16 87.0 104 53.8
BolC9t57103H Brassica oleracea HOM05D000607 ORTHO05D010164 8.0e-16 87.0 104 53.8
BcaC04g20551 Brassica carinata HOM05D000607 ORTHO05D010164 1.0e-15 86.7 104 52.9
A10p10250 Brassica napus HOM05D000607 ORTHO05D010164 1.0e-15 86.7 104 52.9
C09p42230 Brassica napus HOM05D000607 ORTHO05D010164 1.0e-15 86.7 104 52.9
BolC9t57104H Brassica oleracea HOM05D000607 ORTHO05D010164 1.0e-15 86.7 104 52.9
CARHR265710 Cardamine hirsuta HOM05D000607 ORTHO05D010164 1.4e-15 86.3 104 50.0
C03p18170 Brassica napus HOM05D000607 ORTHO05D010164 3.0e-15 85.1 96 58.3
BolC3t14218H Brassica oleracea HOM05D000607 ORTHO05D010164 3.0e-15 85.1 96 58.3
C03p18190 Brassica napus HOM05D000607 ORTHO05D010164 4.0e-15 84.7 96 55.2
BolC3t14220H Brassica oleracea HOM05D000607 ORTHO05D010164 4.0e-15 84.7 96 55.2
A03p15560 Brassica napus HOM05D000607 ORTHO05D010164 6.8e-15 84.0 96 54.2
BraA03t10848Z Brassica rapa HOM05D000607 ORTHO05D010164 6.8e-15 84.0 96 54.2
BcaB01g00906 Brassica carinata HOM05D000607 ORTHO05D010164 4.4e-14 81.3 81 54.3
BcaC03g14510 Brassica carinata HOM05D000607 ORTHO05D010164 7.5e-14 80.5 78 55.1
BcaC04g20541 Brassica carinata HOM05D000607 ORTHO05D010164 9.8e-14 80.1 77 57.1
C09p42340 Brassica napus HOM05D000607 ORTHO05D010164 9.8e-14 80.1 77 57.1
BolC9t57113H Brassica oleracea HOM05D000607 ORTHO05D010164 9.8e-14 80.1 77 57.1
Sp6g14910 Schrenkiella parvula HOM05D000607 ORTHO05D010164 9.8e-14 80.1 94 46.8
BraA02t06224Z Brassica rapa HOM05D000607 ORTHO05D010164 1.3e-13 79.7 59 61.0
Aa31LG3G8030 Aethionema arabicum HOM05D000607 ORTHO05D010164 1.7e-13 79.3 90 50.0
Sp6g14870 Schrenkiella parvula HOM05D000607 ORTHO05D010164 3.7e-13 78.2 78 55.1
CARHR265700 Cardamine hirsuta HOM05D000607 ORTHO05D010164 6.3e-13 77.4 102 47.1
BcaC03g14503 Brassica carinata HOM05D000607 ORTHO05D010164 8.3e-13 77.0 98 50.0
Sp6g09500 Schrenkiella parvula HOM05D000607 ORTHO05D010164 1.8e-12 75.9 99 48.5
BcaB05g21977 Brassica carinata HOM05D000607 ORTHO05D010164 3.1e-12 75.1 80 48.8
BcaC01g06197 Brassica carinata HOM05D000607 ORTHO05D010164 3.1e-12 75.1 91 53.8
BcaC01g06201 Brassica carinata HOM05D000607 ORTHO05D010164 3.1e-12 75.1 91 53.8
C02p19420 Brassica napus HOM05D000607 ORTHO05D010164 4.1e-12 74.7 98 50.0
BolC2t08077H Brassica oleracea HOM05D000607 ORTHO05D010164 4.1e-12 74.7 98 50.0
Thhalv10014994m.g Eutrema salsugineum HOM05D000607 ORTHO05D010164 5.4e-12 74.3 98 50.0
AT5G52770 Arabidopsis thaliana HOM05D000607 ORTHO05D010164 3.5e-11 71.6 65 58.5
Aa31LG3G8020 Aethionema arabicum HOM05D000607 ORTHO05D010164 4.5e-11 71.2 86 43.0
THA.LOC104825116 Tarenaya hassleriana HOM05D000607 ORTHO05D010164 4.5e-11 71.2 97 40.2
C02p19400 Brassica napus HOM05D000607 ORTHO05D010164 1.3e-10 69.7 79 45.6
Aa31LG3G8040 Aethionema arabicum HOM05D000607 ORTHO05D010164 2.9e-10 68.6 76 47.4
AL8G27200 Arabidopsis lyrata HOM05D000607 ORTHO05D010164 2.9e-10 68.6 104 47.1
BraA10t43104Z Brassica rapa HOM05D000607 ORTHO05D010164 5.6e-09 64.3 38 78.9
Aa31LG3G8050 Aethionema arabicum HOM05D000607 ORTHO05D010164 2.1e-08 62.4 62 50.0
CARHR265690 Cardamine hirsuta HOM05D000607 ORTHO05D010164 4.7e-08 61.2 39 74.4
Thecc.03G185200 Theobroma cacao HOM05D000607 ORTHO05D000518 1.8e-07 59.3 99 45.5
Lalb_Chr06g0161361 Lupinus albus HOM05D000607 ORTHO05D000518 6.8e-07 57.4 98 41.8
PSO478G2661 Papaver somniferum HOM05D000607 ORTHO05D000518 6.8e-07 57.4 89 42.7
PSO478G4469 Papaver somniferum HOM05D000607 ORTHO05D000518 6.8e-07 57.4 89 42.7
AL8G27170 Arabidopsis lyrata HOM05D000607 ORTHO05D000518 2.6e-06 55.5 88 38.6
AT5G52740 Arabidopsis thaliana HOM05D000607 ORTHO05D000518 5.7e-06 54.3 89 38.2
PSO782G1183 Papaver somniferum HOM05D000607 ORTHO05D000518 7.5e-06 53.9 73 43.8
VMungo0464G1709 Vigna mungo HOM05D000607 ORTHO05D000518 9.8e-06 53.5 94 39.4


User provided reference genes

Program Settings