Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT5G52690 Arabidopsis thaliana HOM05D009421 ORTHO05D023636 6.4e-94 347.4 178 100.0
AL8G27150 Arabidopsis lyrata HOM05D009421 ORTHO05D023636 8.1e-65 250.8 160 81.2
AT5G52680 Arabidopsis thaliana HOM05D009421 ORTHO05D023636 1.8e-64 249.6 160 81.2
Carub.0008s1282 Capsella rubella HOM05D009421 ORTHO05D023636 1.9e-58 229.6 151 78.8
AT5G52700 Arabidopsis thaliana HOM05D009421 ORTHO05D082023 7.4e-50 201.1 187 59.9
Carub.0008s1283 Capsella rubella HOM05D009421 ORTHO05D023636 2.9e-46 189.1 151 66.2
AT5G52710 Arabidopsis thaliana HOM05D009421 ORTHO05D081762 8.2e-41 171.0 158 59.5
Carub.0008s1286 Capsella rubella HOM05D009421 ORTHO05D114062 1.8e-40 169.9 161 58.4
Carub.0008s1284 Capsella rubella HOM05D009421 ORTHO05D012578 2.8e-33 146.0 150 54.0
Carub.0008s1285 Capsella rubella HOM05D009421 ORTHO05D012578 1.5e-31 140.2 160 53.8
Sp6g14960 Schrenkiella parvula HOM05D009421 ORTHO05D371178 2.4e-24 116.3 138 48.6
AL8G27160 Arabidopsis lyrata HOM05D009421 ORTHO05D012578 6.3e-17 91.7 69 68.1
BraA03t10850Z Brassica rapa HOM05D009421 ORTHO05D012578 5.2e-11 72.0 65 60.0
AT5G52670 Arabidopsis thaliana HOM05D009421 ORTHO05D012578 1.1e-10 70.9 74 54.1
AL8G27140 Arabidopsis lyrata HOM05D009421 ORTHO05D012578 2.0e-10 70.1 70 55.7
Sp6g14840 Schrenkiella parvula HOM05D009421 ORTHO05D012578 2.6e-10 69.7 67 56.7
Sp6g14850 Schrenkiella parvula HOM05D009421 ORTHO05D012578 3.3e-10 69.3 65 60.0
BcaB01g04209 Brassica carinata HOM05D009421 ORTHO05D012578 4.4e-10 68.9 65 55.4
CARHR265660 Cardamine hirsuta HOM05D009421 ORTHO05D012578 4.4e-10 68.9 75 52.0
Carub.0008s1281 Capsella rubella HOM05D009421 ORTHO05D012578 3.7e-09 65.9 57 57.9
Thhalv10015036m.g Eutrema salsugineum HOM05D009421 ORTHO05D012578 4.8e-09 65.5 83 48.2
AT5G52720 Arabidopsis thaliana HOM05D009421 ORTHO05D012578 3.5e-07 59.3 79 45.6
Thhalv10015441m.g Eutrema salsugineum HOM05D009421 ORTHO05D012578 5.9e-07 58.5 62 48.4
Sp6g14970 Schrenkiella parvula HOM05D009421 ORTHO05D371589 1.7e-06 57.0 120 37.5
Thhalv10015970m.g Eutrema salsugineum HOM05D009421 ORTHO05D012578 6.5e-06 55.1 92 40.2


User provided reference genes

Program Settings