Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT5G52680 Arabidopsis thaliana HOM05D009421 ORTHO05D023636 1.4e-120 436.4 239 100.0
AL8G27150 Arabidopsis lyrata HOM05D009421 ORTHO05D023636 1.4e-80 303.5 235 77.4
AT5G52690 Arabidopsis thaliana HOM05D009421 ORTHO05D023636 1.1e-64 250.8 160 81.2
Carub.0008s1282 Capsella rubella HOM05D009421 ORTHO05D023636 2.7e-63 246.1 181 72.4
AT5G52700 Arabidopsis thaliana HOM05D009421 ORTHO05D082023 1.9e-53 213.4 223 56.1
Carub.0008s1283 Capsella rubella HOM05D009421 ORTHO05D023636 2.2e-49 199.9 187 58.8
AT5G52710 Arabidopsis thaliana HOM05D009421 ORTHO05D081762 3.4e-42 176.0 157 58.6
Carub.0008s1286 Capsella rubella HOM05D009421 ORTHO05D114062 8.1e-36 154.8 172 51.2
Carub.0008s1284 Capsella rubella HOM05D009421 ORTHO05D012578 4.0e-35 152.5 157 55.4
Carub.0008s1285 Capsella rubella HOM05D009421 ORTHO05D012578 1.0e-30 137.9 184 47.8
AL8G27160 Arabidopsis lyrata HOM05D009421 ORTHO05D012578 1.8e-22 110.5 104 58.7
Sp6g14960 Schrenkiella parvula HOM05D009421 ORTHO05D371178 7.4e-21 105.1 138 44.9
BraA03t10850Z Brassica rapa HOM05D009421 ORTHO05D012578 1.0e-09 68.2 64 56.2
BcaB01g04209 Brassica carinata HOM05D009421 ORTHO05D012578 3.8e-09 66.2 64 53.1
Sp6g14850 Schrenkiella parvula HOM05D009421 ORTHO05D012578 3.8e-09 66.2 64 57.8
AL8G27140 Arabidopsis lyrata HOM05D009421 ORTHO05D012578 8.5e-09 65.1 64 53.1
AT5G52670 Arabidopsis thaliana HOM05D009421 ORTHO05D012578 8.5e-09 65.1 64 53.1
Sp6g14840 Schrenkiella parvula HOM05D009421 ORTHO05D012578 1.4e-08 64.3 60 53.3
CARHR265660 Cardamine hirsuta HOM05D009421 ORTHO05D012578 2.5e-08 63.5 64 51.6
Thhalv10015036m.g Eutrema salsugineum HOM05D009421 ORTHO05D012578 5.5e-08 62.4 102 40.2
Sp6g14860 Schrenkiella parvula HOM05D013825 ORTHO05D016025 1.6e-07 60.8 78 47.4
Carub.0008s1281 Capsella rubella HOM05D009421 ORTHO05D012578 7.9e-07 58.5 56 51.8
Thhalv10015441m.g Eutrema salsugineum HOM05D009421 ORTHO05D012578 3.0e-06 56.6 69 44.9


User provided reference genes

Program Settings