Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT5G52670 Arabidopsis thaliana HOM05D009421 ORTHO05D012578 4.2e-53 211.1 104 100.0
AL8G27140 Arabidopsis lyrata HOM05D009421 ORTHO05D012578 1.2e-52 209.5 104 99.0
CARHR265660 Cardamine hirsuta HOM05D009421 ORTHO05D012578 2.9e-46 188.3 102 89.2
Sp6g14840 Schrenkiella parvula HOM05D009421 ORTHO05D012578 6.0e-36 154.1 102 70.6
BcaB01g04209 Brassica carinata HOM05D009421 ORTHO05D012578 2.3e-35 152.1 102 72.5
BraA03t10850Z Brassica rapa HOM05D009421 ORTHO05D012578 9.6e-34 146.7 102 69.6
Thhalv10015896m.g Eutrema salsugineum HOM05D009421 ORTHO05D012578 2.7e-28 128.6 102 63.7
AT5G52720 Arabidopsis thaliana HOM05D009421 ORTHO05D012578 7.9e-28 127.1 94 66.0
Thhalv10015036m.g Eutrema salsugineum HOM05D009421 ORTHO05D012578 6.7e-27 124.0 90 66.7
Carub.0008s1281 Capsella rubella HOM05D009421 ORTHO05D012578 1.9e-26 122.5 104 65.4
Sp6g14850 Schrenkiella parvula HOM05D009421 ORTHO05D012578 7.4e-26 120.6 94 63.8
Thhalv10015441m.g Eutrema salsugineum HOM05D009421 ORTHO05D012578 1.1e-21 106.7 75 68.0
Thhalv10015970m.g Eutrema salsugineum HOM05D009421 ORTHO05D012578 9.3e-21 103.6 103 54.4
AT5G52730 Arabidopsis thaliana HOM05D009421 ORTHO05D012578 4.1e-16 88.2 79 59.5
Thhalv10016007m.g Eutrema salsugineum HOM05D009421 ORTHO05D012578 4.1e-16 88.2 91 53.8
AL8G27150 Arabidopsis lyrata HOM05D009421 ORTHO05D023636 2.1e-12 75.9 77 54.5
Carub.0008s1285 Capsella rubella HOM05D009421 ORTHO05D012578 2.3e-11 72.4 90 48.9
AT5G52690 Arabidopsis thaliana HOM05D009421 ORTHO05D023636 3.0e-11 72.0 74 54.1
BcaC01g06193 Brassica carinata HOM05D009421 ORTHO05D012578 8.8e-11 70.5 102 41.2
Carub.0008s1287 Capsella rubella HOM05D009421 ORTHO05D012578 1.1e-10 70.1 81 45.7
Carub.0008s1283 Capsella rubella HOM05D009421 ORTHO05D023636 5.7e-10 67.8 70 51.4
A01p40530 Brassica napus HOM05D013825 ORTHO05D016025 7.4e-10 67.4 88 40.9
Sp6g14860 Schrenkiella parvula HOM05D013825 ORTHO05D016025 1.7e-09 66.2 90 43.3
Carub.0008s1282 Capsella rubella HOM05D009421 ORTHO05D023636 3.7e-09 65.1 70 50.0
AT5G52680 Arabidopsis thaliana HOM05D009421 ORTHO05D023636 4.8e-09 64.7 64 53.1
Thhalv10015053m.g Eutrema salsugineum HOM05D000607 ORTHO05D000518 1.1e-08 63.5 72 51.4
Carub.0008s1288 Capsella rubella HOM05D000607 ORTHO05D000518 1.4e-08 63.2 81 48.1
AL8G27160 Arabidopsis lyrata HOM05D009421 ORTHO05D012578 3.1e-08 62.0 80 48.8
AT5G52700 Arabidopsis thaliana HOM05D009421 ORTHO05D082023 5.3e-08 61.2 58 51.7
AT5G52740 Arabidopsis thaliana HOM05D000607 ORTHO05D000518 6.9e-08 60.8 84 45.2
C03p18210 Brassica napus HOM05D009421 ORTHO05D012578 1.2e-07 60.1 51 52.9
Eucgr.A02726 Eucalyptus grandis HOM05D000607 ORTHO05D000518 1.2e-07 60.1 89 44.9
Lj5A278G73 Lonicera japonica HOM05D000101 ORTHO05D002559 1.2e-07 60.1 95 38.9
Carub.0008s1286 Capsella rubella HOM05D009421 ORTHO05D114062 1.5e-07 59.7 65 53.8
Sp6g14960 Schrenkiella parvula HOM05D009421 ORTHO05D371178 2.0e-07 59.3 59 45.8
Carub.0008s1284 Capsella rubella HOM05D009421 ORTHO05D012578 2.6e-07 58.9 65 47.7
CARHR000880 Cardamine hirsuta HOM05D000607 ORTHO05D000518 2.6e-07 58.9 100 36.0
C08p53680 Brassica napus HOM05D000607 ORTHO05D000518 3.4e-07 58.5 87 41.4
BolC8t52882H Brassica oleracea HOM05D000607 ORTHO05D000518 3.4e-07 58.5 86 41.9
BraA09t42248Z Brassica rapa HOM05D000607 ORTHO05D000518 3.4e-07 58.5 86 41.9
ClCG07G007940 Citrullus lanatus HOM05D000607 ORTHO05D000518 3.4e-07 58.5 86 39.5
AT1G01490 Arabidopsis thaliana HOM05D000607 ORTHO05D000518 4.5e-07 58.2 102 36.3
BcaB04g21026 Brassica carinata HOM05D013825 ORTHO05D016025 4.5e-07 58.2 92 39.1
BolC5t28841H Brassica oleracea HOM05D000607 ORTHO05D000518 5.9e-07 57.8 102 36.3
AL1G10920 Arabidopsis lyrata HOM05D000607 ORTHO05D000518 7.7e-07 57.4 102 36.3
AT5G52710 Arabidopsis thaliana HOM05D009421 ORTHO05D081762 7.7e-07 57.4 61 52.5
C05p00520 Brassica napus HOM05D000607 ORTHO05D000518 7.7e-07 57.4 102 36.3
Sp1g00820 Schrenkiella parvula HOM05D000607 ORTHO05D000518 7.7e-07 57.4 79 40.5
ECA240G2892 Erigeron canadensis HOM05D000005 ORTHO05D000012 1.0e-06 57.0 79 41.8
CAN.G126.32 Capsicum annuum HOM05D000607 ORTHO05D000518 1.3e-06 56.6 78 44.9
Hund11714 Selenicereus undatus HOM05D000607 ORTHO05D000518 1.7e-06 56.2 95 36.8
BolC1t05155H Brassica oleracea HOM05D013825 ORTHO05D016025 2.2e-06 55.8 116 32.8
MBI04_g35361_MAGBIO Magnolia biondii HOM05D000607 ORTHO05D000518 2.2e-06 55.8 79 39.2
Migut.E01209 Erythranthe guttata HOM05D000607 ORTHO05D000518 2.9e-06 55.5 87 44.8
Nn6g35654 Nelumbo nucifera HOM05D000607 ORTHO05D000518 2.9e-06 55.5 79 41.8
Nitab4.5_0003001g0020 Nicotiana tabacum HOM05D004004 ORTHO05D003284 2.9e-06 55.5 90 32.2
Nitab4.5_0005980g0010 Nicotiana tabacum HOM05D004004 ORTHO05D003284 2.9e-06 55.5 95 30.5
Peaxi162Scf00444g00231 Petunia axillaris HOM05D000607 ORTHO05D000518 2.9e-06 55.5 77 41.6
Solyc03g007870.3 Solanum lycopersicum HOM05D000607 ORTHO05D000518 2.9e-06 55.5 78 43.6
Sopen03g003810 Solanum pennellii HOM05D000607 ORTHO05D000518 2.9e-06 55.5 78 43.6
PGSC0003DMG400009507 Solanum tuberosum HOM05D000607 ORTHO05D000518 2.9e-06 55.5 78 43.6
PGSC0003DMG400031424 Solanum tuberosum HOM05D000607 ORTHO05D000518 2.9e-06 55.5 78 43.6
Nitab4.5_0007116g0010 Nicotiana tabacum HOM05D000607 ORTHO05D000518 3.8e-06 55.1 78 43.6
Nitab4.5_0006014g0030 Nicotiana tabacum HOM05D000607 ORTHO05D000518 5.0e-06 54.7 78 42.3
TAR636G0645 Trochodendron aralioides HOM05D000607 ORTHO05D000518 5.0e-06 54.7 79 40.5
BcaC07g42357 Brassica carinata HOM05D000607 ORTHO05D000518 6.5e-06 54.3 102 35.3
A03p15570 Brassica napus HOM05D005974 ORTHO05D007201 6.5e-06 54.3 29 86.2
Duzib187G1158 Durio zibethinus HOM05D004004 ORTHO05D003284 6.5e-06 54.3 88 30.7
Oeu003345.3 Olea europaea HOM05D000033 ORTHO05D013503 6.5e-06 54.3 84 41.7
GSVIVG01028844001 Vitis vinifera HOM05D000607 ORTHO05D000518 6.5e-06 54.3 78 42.3
EL10Ac3g05412 Beta vulgaris HOM05D000607 ORTHO05D000518 8.5e-06 53.9 78 41.0
Migut.E01208 Erythranthe guttata HOM05D000607 ORTHO05D000518 8.5e-06 53.9 86 44.2
THA.LOC104811951 Tarenaya hassleriana HOM05D000607 ORTHO05D000518 8.5e-06 53.9 92 40.2
GSVIVG01026961001 Vitis vinifera HOM05D000607 ORTHO05D000518 8.5e-06 53.9 74 39.2


User provided reference genes

Program Settings