Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT5G52190 Arabidopsis thaliana HOM05D006363 ORTHO05D007920 4.7e-112 407.9 209 100.0
AL8G26570 Arabidopsis lyrata HOM05D006363 ORTHO05D007920 7.0e-100 367.5 201 94.0
CARHR265110 Cardamine hirsuta HOM05D006363 ORTHO05D007920 9.7e-94 347.1 210 86.2
Carub.0008s1228 Capsella rubella HOM05D006363 ORTHO05D007920 2.7e-91 339.0 209 85.2
Thhalv10015742m.g Eutrema salsugineum HOM05D006363 ORTHO05D007920 1.0e-90 337.0 209 82.3
BraA03t10870Z Brassica rapa HOM05D006363 ORTHO05D007920 3.2e-89 332.0 209 82.3
BcaC01g06171 Brassica carinata HOM05D006363 ORTHO05D007920 6.1e-88 327.8 209 81.3
BcaB01g04190 Brassica carinata HOM05D006363 ORTHO05D007920 2.3e-87 325.9 209 79.9
BolC3t14244H Brassica oleracea HOM05D006363 ORTHO05D007920 3.0e-87 325.5 209 80.4
C03p18470 Brassica napus HOM05D006363 ORTHO05D007920 4.0e-87 325.1 209 80.9
Sp6g14440 Schrenkiella parvula HOM05D006363 ORTHO05D007920 1.1e-84 317.0 209 78.0
THA.LOC104811988 Tarenaya hassleriana HOM05D006363 ORTHO05D007920 6.8e-79 297.7 209 72.7
QL09p014582 Quercus lobata HOM05D006363 ORTHO05D007920 6.3e-77 291.2 204 73.0
Medtr1g100753 Medicago truncatula HOM05D006363 ORTHO05D007920 1.8e-76 289.7 203 71.4
Aa31LG3G8570 Aethionema arabicum HOM05D006363 ORTHO05D007920 5.4e-76 288.1 201 74.1
TPR.G14326 Trifolium pratense HOM05D006363 ORTHO05D007920 7.0e-76 287.7 208 69.2
Psat6g200600 Pisum sativum HOM05D006363 ORTHO05D007920 1.2e-75 287.0 208 70.2
Ca_10782_v3 Cicer arietinum L. HOM05D006363 ORTHO05D007920 2.0e-75 286.2 204 71.1
CiPaw.03G104700 Carya illinoinensis HOM05D006363 ORTHO05D007920 3.5e-75 285.4 201 72.6
Potri.015G140600 Populus trichocarpa HOM05D006363 ORTHO05D007920 7.8e-75 284.3 201 70.1
Cfa008303 Carpinus fangiana HOM05D006363 ORTHO05D007920 1.3e-74 283.5 201 70.6
Manes.07G111200 Manihot esculenta HOM05D006363 ORTHO05D007920 1.3e-74 283.5 199 72.4
Sabra15G0151200 Salix brachista HOM05D006363 ORTHO05D007920 1.3e-74 283.5 201 71.1
Haze_13734 Corylus avellana HOM05D006363 ORTHO05D007920 2.3e-74 282.7 201 71.1
Glyma.10G237500 Glycine max HOM05D006363 ORTHO05D007920 2.3e-74 282.7 209 68.4
TWI39G0139 Tripterygium wilfordii HOM05D006363 ORTHO05D007920 2.9e-74 282.3 201 69.2
Glyma.20G157100 Glycine max HOM05D006363 ORTHO05D007920 5.6e-73 278.1 209 68.4
MD01G1199000 Malus domestica HOM05D006363 ORTHO05D007920 9.5e-73 277.3 200 72.0
Ciclev10007013m.g Citrus clementina HOM05D006363 ORTHO05D007920 1.2e-72 276.9 209 67.5
FAN06G3284 Fragaria x ananassa HOM05D006363 ORTHO05D007920 3.6e-72 275.4 208 68.8
FAN06G3928 Fragaria x ananassa HOM05D006363 ORTHO05D007920 3.6e-72 275.4 208 68.8
FAN10G0438 Fragaria x ananassa HOM05D006363 ORTHO05D007920 6.1e-72 274.6 208 68.3
FvH4_7g29240 Fragaria vesca HOM05D006363 ORTHO05D007920 8.0e-72 274.2 208 68.3
PGR042G3170 Punica granatum HOM05D006363 ORTHO05D007920 1.8e-71 273.1 205 68.3
Cpa.g.sc107.33 Carica papaya HOM05D006363 ORTHO05D007920 2.3e-71 272.7 205 66.8
RcHm_v2.0_Chr1g0376991 Rosa chinensis HOM05D006363 ORTHO05D007920 2.3e-71 272.7 208 67.8
Atru.chr1.482 Acer truncatum HOM05D006363 ORTHO05D007920 3.1e-71 272.3 202 68.8
LjContig00238g0019616 Lotus japonicus HOM05D006363 ORTHO05D007920 4.0e-71 271.9 201 68.2
Phvul.007G068100 Phaseolus vulgaris HOM05D006363 ORTHO05D007920 5.2e-71 271.6 199 69.8
Prupe.2G292400 Prunus persica HOM05D006363 ORTHO05D007920 6.8e-71 271.2 209 67.9
FAN03G1027 Fragaria x ananassa HOM05D006363 ORTHO05D007920 2.0e-70 269.6 208 68.3
VMungo0720G1872 Vigna mungo HOM05D006363 ORTHO05D007920 2.0e-70 269.6 201 68.7
CsaV3_3G016980 Cucumis sativus L. HOM05D006363 ORTHO05D007920 9.8e-70 267.3 204 65.2
Lalb_Chr02g0140961 Lupinus albus HOM05D006363 ORTHO05D007920 1.3e-69 266.9 199 68.3
Gohir.A12G258900 Gossypium hirsutum HOM05D006363 ORTHO05D007920 2.9e-69 265.8 201 69.7
Duzib205G1779 Durio zibethinus HOM05D006363 ORTHO05D007920 4.9e-69 265.0 201 70.1
Gorai.008G278600 Gossypium raimondii HOM05D006363 ORTHO05D007920 6.4e-69 264.6 201 69.2
COL.COLO4_14288 Corchorus olitorius HOM05D006363 ORTHO05D007920 1.9e-68 263.1 201 69.2
MD07G1266800 Malus domestica HOM05D006363 ORTHO05D007920 1.9e-68 263.1 201 68.7
MELO3C006895.2 Cucumis melo HOM05D006363 ORTHO05D007920 3.2e-68 262.3 204 65.2
Gohir.D12G260100 Gossypium hirsutum HOM05D006363 ORTHO05D007920 4.1e-68 261.9 201 69.2
Peaxi162Scf00915g00018 Petunia axillaris HOM05D006363 ORTHO05D007920 9.2e-68 260.8 209 66.0
Thecc.03G174500 Theobroma cacao HOM05D006363 ORTHO05D007920 1.2e-67 260.4 201 68.2
Oeu062762.2 Olea europaea HOM05D006363 ORTHO05D007920 2.0e-67 259.6 209 66.0
FAN03G1282 Fragaria x ananassa HOM05D006363 ORTHO05D007920 4.6e-67 258.5 208 66.8
Sed0019375 Sechium edule HOM05D006363 ORTHO05D007920 7.8e-67 257.7 202 66.8
CSS0028509 Camellia sinensis var. sinensis HOM05D006363 ORTHO05D007920 1.3e-66 256.9 209 65.6
vmacro09843 Vaccinium macrocarpon HOM05D006363 ORTHO05D007920 1.7e-66 256.5 201 68.7
CSS0002932 Camellia sinensis var. sinensis HOM05D006363 ORTHO05D007920 2.3e-66 256.1 209 65.6
Rhsim09G0197500 Rhododendron simsii HOM05D006363 ORTHO05D007920 6.6e-66 254.6 201 68.2
PGSC0003DMG400014325 Solanum tuberosum HOM05D006363 ORTHO05D007920 4.3e-65 251.9 209 67.0
AUR62021214 Chenopodium quinoa HOM05D006363 ORTHO05D007920 1.2e-64 250.4 206 64.6
AUR62016007 Chenopodium quinoa HOM05D006363 ORTHO05D007920 1.6e-64 250.0 198 67.2
CANSAT21G0627 Cannabis sativa HOM05D006363 ORTHO05D007920 2.8e-64 249.2 205 65.4
Lj8C25T12 Lonicera japonica HOM05D006363 ORTHO05D007920 3.6e-64 248.8 201 65.7
MSTRG.8448 Avicennia marina HOM05D006363 ORTHO05D007920 4.7e-64 248.4 209 64.1
EL10Ac3g05667 Beta vulgaris HOM05D006363 ORTHO05D007920 1.1e-63 247.3 204 64.2
Sopen03g004810 Solanum pennellii HOM05D006363 ORTHO05D007920 1.4e-63 246.9 203 66.5
Cc03_g13850 Coffea canephora HOM05D006363 ORTHO05D007920 2.3e-63 246.1 201 64.7
Solyc03g025990.1 Solanum lycopersicum HOM05D006363 ORTHO05D007920 3.1e-63 245.7 203 66.5
Nitab4.5_0000716g0210 Nicotiana tabacum HOM05D006363 ORTHO05D007920 5.2e-63 245.0 209 64.1
Dinv28459 Davidia involucrata HOM05D006363 ORTHO05D007920 8.9e-63 244.2 205 62.4
CANSAT21G2254 Cannabis sativa HOM05D006363 ORTHO05D007920 1.5e-62 243.4 206 65.0
Migut.F01133 Erythranthe guttata HOM05D006363 ORTHO05D007920 2.0e-62 243.0 205 61.0
Nitab4.5_0001508g0030 Nicotiana tabacum HOM05D006363 ORTHO05D007920 2.6e-62 242.7 209 62.7
Eucgr.A02801 Eucalyptus grandis HOM05D006363 ORTHO05D007920 1.1e-60 237.3 204 61.8
Aqoxy7G00395 Aquilegia oxysepala HOM05D006363 ORTHO05D007920 2.4e-60 236.1 211 58.8
Lsat_1_v5_gn_2_133820 Lactuca sativa HOM05D006363 ORTHO05D007920 2.4e-60 236.1 209 59.3
A03p15800 Brassica napus HOM05D006363 ORTHO05D007920 3.2e-60 235.7 145 84.1
HanXRQChr14g0462221 Helianthus annuus HOM05D006363 ORTHO05D007920 5.4e-60 235.0 209 61.7
ECA238G0548 Erigeron canadensis HOM05D006363 ORTHO05D007920 9.2e-60 234.2 203 63.1
GSVIVG01010552001 Vitis vinifera HOM05D006363 ORTHO05D007920 2.7e-59 232.6 205 62.0
Nn6g34197 Nelumbo nucifera HOM05D006363 ORTHO05D007920 1.0e-58 230.7 203 60.6
PSO782G5704 Papaver somniferum HOM05D006363 ORTHO05D007920 1.0e-58 230.7 216 57.9
unitig_60.g25545 Utricularia gibba HOM05D006363 ORTHO05D007920 1.7e-58 229.9 205 61.0
PSO478G1739 Papaver somniferum HOM05D006363 ORTHO05D007920 1.1e-57 227.3 215 58.1
DCAR_018188 Daucus carota HOM05D006363 ORTHO05D007920 1.9e-57 226.5 209 58.4
CAN.G947.11 Capsicum annuum HOM05D006363 ORTHO05D007920 2.5e-57 226.1 204 61.8
Ah.13g075440 Amaranthus hybridus HOM05D006363 ORTHO05D007920 7.3e-57 224.6 196 61.7
MBI04_g04731_MAGBIO Magnolia biondii HOM05D006363 ORTHO05D007920 3.4e-54 215.7 207 54.6
TAR375G0304 Trochodendron aralioides HOM05D006363 ORTHO05D007920 7.8e-51 204.5 202 55.4
CDE04G1845 Ceratophyllum demersum HOM05D006363 ORTHO05D007920 5.1e-50 201.8 190 56.3
ATR0757G111 Amborella trichopoda HOM05D006363 ORTHO05D007920 7.3e-49 198.0 204 52.9
FAN01G1422 Fragaria x ananassa HOM05D006363 ORTHO05D007920 4.0e-47 192.2 208 51.0
A08p37210 Brassica napus HOM05D006363 ORTHO05D007920 5.2e-47 191.8 139 74.1
HPP92_021110 Vanilla planifolia HOM05D006363 ORTHO05D007920 1.2e-46 190.7 188 56.4
Zm00001eb428810 Zea mays HOM05D006363 ORTHO05D007920 1.2e-46 190.7 204 52.9
Os04g0568600 Oryza sativa ssp. japonica HOM05D006363 ORTHO05D007920 7.1e-44 181.4 197 51.8
SEGI_31787 Sequoiadendron giganteum HOM05D006363 ORTHO05D007920 1.3e-40 170.6 206 46.6
Pp3c6_24270 Physcomitrium patens HOM05D006363 ORTHO05D007920 2.8e-40 169.5 214 45.3
Sc25g0000440 Simmondsia chinensis HOM05D006363 ORTHO05D007920 2.0e-38 163.3 155 59.4
SalBow2G2214 Salvia bowleyana HOM05D006363 ORTHO05D007920 4.4e-38 162.2 151 57.6
BcaC01g06168 Brassica carinata HOM05D006363 ORTHO05D007920 9.3e-36 154.5 102 77.5
SMO367G0077 Selaginella moellendorffii HOM05D006363 ORTHO05D007920 2.7e-35 152.9 174 54.6
BcaC06g36545 Brassica carinata HOM05D006363 ORTHO05D007920 8.4e-29 131.3 86 76.7
Mapoly0047s0087 Marchantia polymorpha HOM05D006363 ORTHO05D007920 3.2e-20 102.8 136 46.3
BolC5t32613H Brassica oleracea HOM05D006363 ORTHO05D007920 1.0e-18 97.8 68 73.5
C05p38730 Brassica napus HOM05D006363 ORTHO05D007920 3.9e-18 95.9 68 72.1
Pp3c17_12800 Physcomitrium patens HOM05D006363 ORTHO05D007920 7.4e-17 91.7 310 27.1
TPR.G33086 Trifolium pratense HOM05D006363 ORTHO05D007920 2.8e-16 89.7 62 75.8
BcaC01g06167 Brassica carinata HOM05D006363 ORTHO05D007920 9.0e-15 84.7 46 91.3
TAR291G0005 Trochodendron aralioides HOM05D006363 ORTHO05D007920 1.3e-13 80.9 89 52.8
TAR375G0495 Trochodendron aralioides HOM05D006363 ORTHO05D007920 1.3e-13 80.9 89 52.8
TAR624G1193 Trochodendron aralioides HOM05D006363 ORTHO05D007920 1.3e-13 80.9 89 52.8
TAR633G0106 Trochodendron aralioides HOM05D006363 ORTHO05D007920 3.8e-13 79.3 89 50.6
BcaC05g27871 Brassica carinata HOM05D006363 ORTHO05D007920 5.0e-13 79.0 106 50.0
TAR383G0849 Trochodendron aralioides HOM05D003653 ORTHO05D004249 8.4e-13 78.2 106 43.4
TAR629G0450 Trochodendron aralioides HOM05D006363 ORTHO05D007920 1.1e-12 77.8 89 51.7
TAR633G1276 Trochodendron aralioides HOM05D006363 ORTHO05D007920 7.1e-12 75.1 89 49.4
Actinidia03116 Actinidia chinensis HOM05D006363 ORTHO05D007920 9.3e-12 74.7 110 44.5
TAR614G0003 Trochodendron aralioides HOM05D006363 ORTHO05D007920 1.6e-11 73.9 89 48.3
A01p23910 Brassica napus HOM05D006363 ORTHO05D007920 2.5e-09 66.6 49 69.4
BraA01t02298Z Brassica rapa HOM05D006363 ORTHO05D007920 2.5e-09 66.6 49 69.4
A03p67130 Brassica napus HOM05D006363 ORTHO05D007920 2.6e-06 56.6 47 61.7
BraA01t02765Z Brassica rapa HOM05D006363 ORTHO05D007920 2.6e-06 56.6 47 61.7


User provided reference genes

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