Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT5G52100 Arabidopsis thaliana HOM05D005936 ORTHO05D007967 1.8e-162 575.9 299 100.0
Carub.0008s1218 Capsella rubella HOM05D005936 ORTHO05D007967 5.0e-160 567.8 299 98.0
AL8G26470 Arabidopsis lyrata HOM05D005936 ORTHO05D007967 1.6e-158 562.8 299 97.7
Sp6g14350 Schrenkiella parvula HOM05D005936 ORTHO05D007967 3.6e-158 561.6 299 96.3
SpUn0060_0040 Schrenkiella parvula HOM05D005936 ORTHO05D007967 3.6e-158 561.6 299 96.3
BcaB01g04183 Brassica carinata HOM05D005936 ORTHO05D007967 3.0e-157 558.5 301 96.3
BcaC01g06163 Brassica carinata HOM05D005936 ORTHO05D007967 6.8e-157 557.4 301 96.7
BolC3t14249H Brassica oleracea HOM05D005936 ORTHO05D007967 6.8e-157 557.4 301 96.7
BraA03t10875Z Brassica rapa HOM05D005936 ORTHO05D007967 8.3e-155 550.4 301 95.7
A03p15850 Brassica napus HOM05D005936 ORTHO05D007967 2.8e-150 535.4 290 96.2
Aa31LG3G8470 Aethionema arabicum HOM05D005936 ORTHO05D007967 1.3e-147 526.6 305 90.8
C03p18520 Brassica napus HOM05D005936 ORTHO05D007967 1.1e-146 523.5 315 88.9
THA.LOC104811994 Tarenaya hassleriana HOM05D005936 ORTHO05D007967 1.1e-143 513.5 298 90.3
Thecc.03G170800 Theobroma cacao HOM05D005936 ORTHO05D007967 5.4e-130 468.0 303 78.9
Cfa008280 Carpinus fangiana HOM05D005936 ORTHO05D007967 7.1e-130 467.6 303 79.5
Potri.015G135400 Populus trichocarpa HOM05D005936 ORTHO05D007967 1.0e-128 463.8 302 79.5
Duzib084G0661 Durio zibethinus HOM05D005936 ORTHO05D007967 2.3e-128 462.6 302 79.1
Gohir.D09G040700 Gossypium hirsutum HOM05D005936 ORTHO05D007967 3.9e-128 461.8 303 79.2
Gorai.006G046600 Gossypium raimondii HOM05D005936 ORTHO05D007967 3.9e-128 461.8 303 79.2
Peaxi162Scf00915g00243 Petunia axillaris HOM05D005936 ORTHO05D007967 3.3e-127 458.8 303 76.9
CiPaw.04G067400 Carya illinoinensis HOM05D005936 ORTHO05D007967 7.3e-127 457.6 303 77.6
Nitab4.5_0005024g0030 Nicotiana tabacum HOM05D005936 ORTHO05D007967 1.2e-126 456.8 306 75.8
Migut.F00375 Erythranthe guttata HOM05D005936 ORTHO05D007967 2.8e-126 455.7 300 77.3
CSS0027176 Camellia sinensis var. sinensis HOM05D005936 ORTHO05D007967 4.7e-126 454.9 282 82.3
CSS0048625 Camellia sinensis var. sinensis HOM05D005936 ORTHO05D007967 4.7e-126 454.9 282 82.3
Gohir.A09G039900 Gossypium hirsutum HOM05D005936 ORTHO05D007967 4.7e-126 454.9 303 77.9
Nitab4.5_0001083g0080 Nicotiana tabacum HOM05D005936 ORTHO05D007967 1.8e-125 453.0 308 75.3
ClCG05G007820 Citrullus lanatus HOM05D005936 ORTHO05D007967 6.9e-125 451.1 302 78.1
Eucgr.A02812 Eucalyptus grandis HOM05D005936 ORTHO05D007967 9.0e-125 450.7 302 76.8
CsaV3_3G016820 Cucumis sativus L. HOM05D005936 ORTHO05D007967 1.5e-124 449.9 301 77.7
GSVIVG01010618001 Vitis vinifera HOM05D005936 ORTHO05D007967 2.0e-124 449.5 278 82.0
Sabra15G0147400 Salix brachista HOM05D005936 ORTHO05D007967 2.6e-124 449.1 298 77.5
Solyc03g026210.4 Solanum lycopersicum HOM05D005936 ORTHO05D007967 2.6e-124 449.1 300 77.0
AUR62021235 Chenopodium quinoa HOM05D005936 ORTHO05D007967 4.4e-124 448.4 299 76.6
FvH4_7g29020 Fragaria vesca HOM05D005936 ORTHO05D007967 4.4e-124 448.4 303 76.9
FAN06G1408 Fragaria x ananassa HOM05D005936 ORTHO05D007967 4.4e-124 448.4 303 76.9
QL09p014981 Quercus lobata HOM05D005936 ORTHO05D007967 4.4e-124 448.4 301 76.7
Ah.13g068310 Amaranthus hybridus HOM05D005936 ORTHO05D007967 5.8e-124 448.0 300 76.7
Nn1g01364 Nelumbo nucifera HOM05D005936 ORTHO05D007967 7.6e-124 447.6 303 74.6
MD07G1264500 Malus domestica HOM05D005936 ORTHO05D007967 9.9e-124 447.2 304 77.0
PGSC0003DMG400014268 Solanum tuberosum HOM05D005936 ORTHO05D007967 9.9e-124 447.2 300 76.3
FAN06G0122 Fragaria x ananassa HOM05D005936 ORTHO05D007967 2.2e-123 446.0 303 76.6
PGR042G3346 Punica granatum HOM05D005936 ORTHO05D007967 2.2e-123 446.0 281 80.4
Actinidia34080 Actinidia chinensis HOM05D005936 ORTHO05D007967 2.9e-123 445.7 282 80.5
FAN03G0200 Fragaria x ananassa HOM05D005936 ORTHO05D007967 3.8e-123 445.3 302 76.5
vmacro06722 Vaccinium macrocarpon HOM05D005936 ORTHO05D007967 3.8e-123 445.3 284 80.3
FAN03G0500 Fragaria x ananassa HOM05D005936 ORTHO05D007967 6.4e-123 444.5 302 76.2
Oeu021758.1 Olea europaea HOM05D005936 ORTHO05D007967 1.4e-122 443.4 302 76.8
Prupe.2G290400 Prunus persica HOM05D005936 ORTHO05D007967 2.4e-122 442.6 282 80.5
AUR62016030 Chenopodium quinoa HOM05D005936 ORTHO05D007967 4.2e-122 441.8 307 74.9
SalBow1G7635 Salvia bowleyana HOM05D005936 ORTHO05D007967 7.1e-122 441.0 302 76.5
Hma1.2p1_0270F.1_g108440 Hydrangea macrophylla HOM05D005936 ORTHO05D007967 9.3e-122 440.7 302 75.8
CANSAT21G0538 Cannabis sativa HOM05D005936 ORTHO05D007967 1.2e-121 440.3 305 75.4
DCAR_018171 Daucus carota HOM05D005936 ORTHO05D007967 1.2e-121 440.3 303 75.2
Cc00_g24160 Coffea canephora HOM05D005936 ORTHO05D007967 1.6e-121 439.9 305 74.4
TAR374G0336 Trochodendron aralioides HOM05D005936 ORTHO05D007967 2.7e-121 439.1 286 78.3
PSO478G3778 Papaver somniferum HOM05D005936 ORTHO05D007967 4.6e-121 438.3 303 74.9
CANSAT21G1747 Cannabis sativa HOM05D005936 ORTHO05D007967 6.0e-121 438.0 301 75.4
VMungo0720G1210 Vigna mungo HOM05D005936 ORTHO05D007967 3.9e-120 435.3 305 74.8
Lsat_1_v5_gn_8_7461 Lactuca sativa HOM05D005936 ORTHO05D007967 6.6e-120 434.5 288 76.4
Rhsim03G0177300 Rhododendron simsii HOM05D005936 ORTHO05D007967 6.6e-120 434.5 294 76.9
RcHm_v2.0_Chr1g0376731 Rosa chinensis HOM05D005936 ORTHO05D007967 8.7e-120 434.1 301 75.7
TPR.G17430 Trifolium pratense HOM05D005936 ORTHO05D007967 1.9e-119 433.0 306 75.2
Aqoxy7G00442 Aquilegia oxysepala HOM05D005936 ORTHO05D007967 1.3e-118 430.3 281 77.2
Ciclev10005510m.g Citrus clementina HOM05D005936 ORTHO05D007967 1.6e-118 429.9 284 77.8
COL.COLO4_14264 Corchorus olitorius HOM05D005936 ORTHO05D007967 1.6e-118 429.9 302 74.8
ATR0757G004 Amborella trichopoda HOM05D005936 ORTHO05D007967 2.8e-118 429.1 297 73.1
Medtr1g101400 Medicago truncatula HOM05D005936 ORTHO05D007967 3.6e-118 428.7 305 75.4
Lalb_Chr21g0304951 Lupinus albus HOM05D005936 ORTHO05D007967 6.2e-118 427.9 288 76.0
Phvul.007G066600 Phaseolus vulgaris HOM05D005936 ORTHO05D007967 6.2e-118 427.9 305 73.1
HanXRQChr13g0405681 Helianthus annuus HOM05D005936 ORTHO05D007967 1.4e-117 426.8 286 74.5
Glyma.10G238800 Glycine max HOM05D005936 ORTHO05D007967 3.1e-117 425.6 277 79.4
LjContig00238g0017909 Lotus japonicus HOM05D005936 ORTHO05D007967 5.3e-117 424.9 303 73.3
Thhalv10014460m.g Eutrema salsugineum HOM05D005936 ORTHO05D007967 2.6e-116 422.5 227 95.2
PSO782G1152 Papaver somniferum HOM05D005936 ORTHO05D007967 1.3e-115 420.2 293 74.4
EL10Ac3g05696 Beta vulgaris HOM05D005936 ORTHO05D007967 2.2e-115 419.5 299 72.6
ECA233G0165 Erigeron canadensis HOM05D005936 ORTHO05D007967 4.9e-115 418.3 272 76.5
arahy.Tifrunner.gnm1.ann1.UTGK89 Arachis hypogaea HOM05D005936 ORTHO05D007967 2.4e-114 416.0 310 71.3
Hma1.2p1_0010F.1_g006890 Hydrangea macrophylla HOM05D005936 ORTHO05D007967 1.2e-113 413.7 262 79.4
Manes.06G143900 Manihot esculenta HOM05D005936 ORTHO05D007967 2.0e-108 396.4 262 77.1
Os03g0118600 Oryza sativa ssp. japonica HOM05D005936 ORTHO05D007967 1.1e-106 390.6 277 70.0
arahy.Tifrunner.gnm1.ann1.AYWY8E Arachis hypogaea HOM05D005936 ORTHO05D007967 3.2e-106 389.0 298 71.8
Haze_13754 Corylus avellana HOM05D005936 ORTHO05D007967 4.2e-106 388.7 272 74.6
MELO3C006876.2 Cucumis melo HOM05D005936 ORTHO05D007967 9.3e-106 387.5 264 76.9
Dinv28478 Davidia involucrata HOM05D005936 ORTHO05D007967 4.6e-105 385.2 264 75.8
TWI23G0201 Tripterygium wilfordii HOM05D005936 ORTHO05D007967 1.1e-103 380.6 294 68.7
Lj1C993G3 Lonicera japonica HOM05D005936 ORTHO05D007967 1.9e-103 379.8 303 67.0
unitig_0.g2488 Utricularia gibba HOM05D005936 ORTHO05D007967 5.6e-103 378.3 264 72.0
Psat6g200960 Pisum sativum HOM05D005936 ORTHO05D007967 9.6e-103 377.5 241 79.3
MBI12_g29760_MAGBIO Magnolia biondii HOM05D005936 ORTHO05D007967 3.1e-101 372.5 301 68.1
Ca_10793_v3 Cicer arietinum L. HOM05D005936 ORTHO05D007967 1.0e-99 367.5 264 73.9
CDE09G1316 Ceratophyllum demersum HOM05D005936 ORTHO05D007967 1.3e-99 367.1 241 75.9
Sed0016287 Sechium edule HOM05D005936 ORTHO05D007967 2.5e-95 352.8 220 80.9
SEGI_11434 Sequoiadendron giganteum HOM05D005936 ORTHO05D007967 1.3e-91 340.5 282 59.2
TAR375G0526 Trochodendron aralioides HOM05D005936 ORTHO05D007967 3.6e-89 332.4 263 68.4
Actinidia32894 Actinidia chinensis HOM05D005936 ORTHO05D007967 3.7e-86 322.4 244 70.5
Pp3c21_9920 Physcomitrium patens HOM05D005936 ORTHO05D007967 2.5e-82 309.7 280 54.6
Mapoly0001s0282 Marchantia polymorpha HOM05D005936 ORTHO05D007967 4.7e-81 305.4 276 58.3
Glyma.20G155600 Glycine max HOM05D005936 ORTHO05D007967 8.8e-80 301.2 220 73.2
vmacro06720 Vaccinium macrocarpon HOM05D005936 ORTHO05D007967 2.2e-78 296.6 265 62.3
CARHR265020 Cardamine hirsuta HOM05D005936 ORTHO05D007967 4.8e-78 295.4 155 96.8
SMO367G1305 Selaginella moellendorffii HOM05D005936 ORTHO05D007967 5.9e-76 288.5 280 52.9
Hund04704 Selenicereus undatus HOM05D005936 ORTHO05D007967 1.2e-73 280.8 250 62.0
MD01G1197100 Malus domestica HOM05D005936 ORTHO05D007967 3.5e-68 262.7 323 52.0
Zm00001eb001140 Zea mays HOM05D005936 ORTHO05D007967 5.9e-68 261.9 190 70.5
CBR_g30244 Chara braunii HOM05D005936 ORTHO05D007967 4.7e-65 252.3 284 47.5
MBI12_g45864_MAGBIO Magnolia biondii HOM05D005936 ORTHO05D007967 2.7e-60 236.5 227 60.4
MBI18_g06814_MAGBIO Magnolia biondii HOM05D005936 ORTHO05D007967 2.2e-59 233.4 211 60.7
MBI18_g40469_MAGBIO Magnolia biondii HOM05D005936 ORTHO05D007967 1.1e-58 231.1 182 67.6
MD01G1197000 Malus domestica HOM05D005936 ORTHO05D007967 4.2e-58 229.2 289 50.9
Cpa.g.sc107.7 Carica papaya HOM05D005936 ORTHO05D007967 2.6e-55 219.9 155 71.6
CAN.G548.3 Capsicum annuum HOM05D005936 ORTHO05D007967 1.7e-54 217.2 158 71.5
MSTRG.8763 Avicennia marina HOM05D005936 ORTHO05D007967 2.0e-52 210.3 160 71.2
Duzib205G1997 Durio zibethinus HOM05D005936 ORTHO05D007967 5.0e-51 205.7 227 54.6
AagrBONN_evm.TU.Sc2ySwM_340.388 Anthoceros agrestis HOM05D003851 ORTHO05D005657 1.5e-50 204.1 218 49.5
Sopen03g005080 Solanum pennellii HOM05D005936 ORTHO05D007967 3.3e-50 203.0 155 69.0
MBI09_g40772_MAGBIO Magnolia biondii HOM05D005936 ORTHO05D007967 3.5e-44 183.0 154 63.0
Os03g0117000 Oryza sativa ssp. japonica HOM05D005936 ORTHO05D007967 7.8e-44 181.8 203 52.7
Cpa.g.sc107.8 Carica papaya HOM05D005936 ORTHO05D007967 5.0e-43 179.1 118 77.1
MBI18_g34964_MAGBIO Magnolia biondii HOM05D005936 ORTHO05D007967 3.3e-42 176.4 154 61.0
MBI18_g28463_MAGBIO Magnolia biondii HOM05D005936 ORTHO05D007967 8.0e-41 171.8 155 60.6
FAN01G1428 Fragaria x ananassa HOM05D005936 ORTHO05D007967 2.0e-39 167.2 200 52.0
MBI08_g23116_MAGBIO Magnolia biondii HOM05D005936 ORTHO05D007967 1.2e-36 157.9 139 61.2
MBI07_g12175_MAGBIO Magnolia biondii HOM05D005936 ORTHO05D007967 3.2e-29 133.3 158 50.0
MBI15_g15729_MAGBIO Magnolia biondii HOM05D005936 ORTHO05D007967 1.5e-15 87.8 83 57.8
RcHm_v2.0_Chr1g0376771 Rosa chinensis HOM05D005936 ORTHO05D342530 1.3e-11 74.7 134 39.6
MBI16_g19597_MAGBIO Magnolia biondii HOM05D005936 ORTHO05D007967 1.1e-08 65.1 86 44.2


User provided reference genes

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