Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT5G51545 Arabidopsis thaliana HOM05D007220 ORTHO05D009058 1.6e-95 352.8 186 100.0
AL8G25850 Arabidopsis lyrata HOM05D007220 ORTHO05D009058 6.9e-83 310.8 190 88.9
Carub.0008s1158 Capsella rubella HOM05D007220 ORTHO05D009058 1.0e-78 297.0 189 85.7
BcaC01g06128 Brassica carinata HOM05D007220 ORTHO05D009058 7.4e-69 264.2 188 75.5
C03p18980 Brassica napus HOM05D007220 ORTHO05D009058 7.4e-69 264.2 188 75.5
BolC3t14287H Brassica oleracea HOM05D007220 ORTHO05D009058 7.4e-69 264.2 188 75.5
CARHR264320 Cardamine hirsuta HOM05D007220 ORTHO05D009058 1.8e-67 259.6 191 77.0
BraA03t10902Z Brassica rapa HOM05D007220 ORTHO05D009058 4.1e-67 258.5 189 74.1
BcaB01g04168 Brassica carinata HOM05D007220 ORTHO05D009058 6.7e-62 241.1 188 69.7
Sp6g13740 Schrenkiella parvula HOM05D007220 ORTHO05D009058 1.1e-61 240.4 188 71.3
THA.LOC104811513 Tarenaya hassleriana HOM05D007220 ORTHO05D009058 3.8e-57 225.3 192 67.2
A03p16110 Brassica napus HOM05D007220 ORTHO05D009058 2.7e-55 219.2 188 65.4
Aa31LG3G7960 Aethionema arabicum HOM05D007220 ORTHO05D009058 1.0e-54 217.2 188 66.0
Duzib205G1715 Durio zibethinus HOM05D007220 ORTHO05D009058 5.7e-45 184.9 193 55.4
Thecc.03G158900 Theobroma cacao HOM05D007220 ORTHO05D009058 2.2e-44 183.0 192 56.2
Manes.14G034000 Manihot esculenta HOM05D007220 ORTHO05D009058 5.3e-43 178.3 200 51.5
COL.COLO4_14153 Corchorus olitorius HOM05D007220 ORTHO05D009058 2.6e-42 176.0 189 52.9
MELO3C006826.2 Cucumis melo HOM05D007220 ORTHO05D009058 1.0e-41 174.1 199 55.3
TWI39G1186 Tripterygium wilfordii HOM05D007220 ORTHO05D009058 3.8e-41 172.2 195 53.8
ClCG05G007450 Citrullus lanatus HOM05D007220 ORTHO05D009058 5.0e-41 171.8 198 52.5
CsaV3_3G016270 Cucumis sativus L. HOM05D007220 ORTHO05D009058 1.5e-40 170.2 198 54.0
Cpa.g.sc3.292 Carica papaya HOM05D007220 ORTHO05D009058 4.2e-40 168.7 193 52.8
Cfa008220 Carpinus fangiana HOM05D007220 ORTHO05D009058 2.0e-37 159.8 200 50.0
Dinv28549 Davidia involucrata HOM05D007220 ORTHO05D009058 2.0e-37 159.8 207 49.8
Haze_13838 Corylus avellana HOM05D007220 ORTHO05D009058 4.4e-37 158.7 197 50.8
GSVIVG01018558001 Vitis vinifera HOM05D007220 ORTHO05D009058 4.4e-37 158.7 185 51.4
FvH4_7g27960 Fragaria vesca HOM05D007220 ORTHO05D009058 5.7e-37 158.3 154 58.4
RcHm_v2.0_Chr1g0374911 Rosa chinensis HOM05D007220 ORTHO05D009058 7.5e-37 157.9 166 55.4
FAN06G4318 Fragaria x ananassa HOM05D007220 ORTHO05D009058 9.7e-37 157.5 168 55.4
Eucgr.A02878 Eucalyptus grandis HOM05D007220 ORTHO05D009058 1.3e-36 157.1 199 50.3
FAN03G0488 Fragaria x ananassa HOM05D007220 ORTHO05D009058 3.7e-36 155.6 168 54.8
FAN03G2818 Fragaria x ananassa HOM05D007220 ORTHO05D009058 3.7e-36 155.6 168 54.8
FAN10G3220 Fragaria x ananassa HOM05D007220 ORTHO05D009058 3.7e-36 155.6 168 54.8
Ciclev10005924m.g Citrus clementina HOM05D007220 ORTHO05D009058 4.8e-36 155.2 210 48.1
FAN06G0674 Fragaria x ananassa HOM05D007220 ORTHO05D009058 4.8e-36 155.2 168 54.2
Dinv22967 Davidia involucrata HOM05D007220 ORTHO05D009058 1.1e-35 154.1 139 61.9
Actinidia25024 Actinidia chinensis HOM05D007220 ORTHO05D009058 1.8e-35 153.3 187 49.7
Nn4g26358 Nelumbo nucifera HOM05D007220 ORTHO05D009058 1.8e-35 153.3 201 47.3
MD01G1184500 Malus domestica HOM05D007220 ORTHO05D009058 5.3e-35 151.8 199 50.3
FAN01G2832 Fragaria x ananassa HOM05D007220 ORTHO05D009058 1.6e-34 150.2 154 55.8
Cc02_g04040 Coffea canephora HOM05D007220 ORTHO05D009058 4.5e-34 148.7 141 58.9
Gohir.A07G038900 Gossypium hirsutum HOM05D007220 ORTHO05D009058 7.7e-34 147.9 186 45.7
SGA_v2.0_scaffold2G01175 Striga asiatica HOM05D007220 ORTHO05D009058 1.0e-33 147.5 192 50.0
SGA_v2.0_scaffold486G52391 Striga asiatica HOM05D007220 ORTHO05D009058 1.3e-33 147.1 191 49.2
Potri.015G129600 Populus trichocarpa HOM05D007220 ORTHO05D009058 1.7e-33 146.7 191 49.2
AUR62016183 Chenopodium quinoa HOM05D007220 ORTHO05D009058 6.5e-33 144.8 200 47.5
Sabra15G0142900 Salix brachista HOM05D007220 ORTHO05D009058 6.5e-33 144.8 191 48.2
vmacro09892 Vaccinium macrocarpon HOM05D007220 ORTHO05D009058 6.5e-33 144.8 206 47.1
Glyma.09G232600 Glycine max HOM05D007220 ORTHO05D009058 1.5e-32 143.7 157 52.2
Gorai.001G046100 Gossypium raimondii HOM05D007220 ORTHO05D009058 1.9e-32 143.3 186 44.6
Gohir.D07G043100 Gossypium hirsutum HOM05D007220 ORTHO05D009058 2.5e-32 142.9 186 44.6
CiPaw.04G061800 Carya illinoinensis HOM05D007220 ORTHO05D009058 3.2e-32 142.5 203 44.8
Atru.chr1.664 Acer truncatum HOM05D007220 ORTHO05D009058 5.5e-32 141.7 194 46.4
arahy.Tifrunner.gnm1.ann1.0IXC5E Arachis hypogaea HOM05D007220 ORTHO05D009058 5.5e-32 141.7 109 65.1
MSTRG.27183 Avicennia marina HOM05D007220 ORTHO05D009058 1.6e-31 140.2 193 46.6
Rhsim09G0192800 Rhododendron simsii HOM05D007220 ORTHO05D009058 1.6e-31 140.2 141 58.9
Sc19g0001910 Simmondsia chinensis HOM05D007220 ORTHO05D009058 8.0e-31 137.9 192 47.4
HanXRQChr08g0223851 Helianthus annuus HOM05D007220 ORTHO05D009058 1.0e-30 137.5 156 53.8
PGR042G1708 Punica granatum HOM05D007220 ORTHO05D009058 1.0e-30 137.5 200 43.5
SalBow4G2286 Salvia bowleyana HOM05D007220 ORTHO05D009058 3.0e-30 136.0 190 46.8
QL09p019051 Quercus lobata HOM05D007220 ORTHO05D009058 5.2e-30 135.2 206 43.7
EL10Ac3g05813 Beta vulgaris HOM05D007220 ORTHO05D009058 8.8e-30 134.4 207 45.4
Lsat_1_v5_gn_8_9340 Lactuca sativa HOM05D007220 ORTHO05D009058 7.5e-29 131.3 162 52.5
Nitab4.5_0001548g0050 Nicotiana tabacum HOM05D007220 ORTHO05D009058 9.8e-29 131.0 134 55.2
CSS0026352 Camellia sinensis var. sinensis HOM05D007220 ORTHO05D009058 1.3e-28 130.6 103 64.1
Phvul.011G004500 Phaseolus vulgaris HOM05D007220 ORTHO05D009058 1.3e-28 130.6 161 49.1
Nitab4.5_0000072g0560 Nicotiana tabacum HOM05D007220 ORTHO05D009058 2.2e-28 129.8 111 60.4
Aqoxy7G00673 Aquilegia oxysepala HOM05D007220 ORTHO05D009058 3.7e-28 129.0 133 53.4
CDE09G0763 Ceratophyllum demersum HOM05D007220 ORTHO05D009058 3.7e-28 129.0 145 51.0
CAN.G152.17 Capsicum annuum HOM05D007220 ORTHO05D009058 4.8e-28 128.6 109 60.6
Migut.F00451 Erythranthe guttata HOM05D007220 ORTHO05D009058 4.8e-28 128.6 101 64.4
VMungo1127G0384 Vigna mungo HOM05D007220 ORTHO05D009058 8.3e-28 127.9 162 48.1
Medtr4g035825 Medicago truncatula HOM05D007220 ORTHO05D009058 1.4e-27 127.1 191 43.5
unitig_46.g18768 Utricularia gibba HOM05D007220 ORTHO05D009058 1.4e-27 127.1 181 44.8
Solyc03g083570.3 Solanum lycopersicum HOM05D007220 ORTHO05D009058 3.1e-27 125.9 199 45.2
Ca_30916_v3 Cicer arietinum L. HOM05D007220 ORTHO05D009058 5.4e-27 125.2 167 47.9
Lj3g0016008 Lotus japonicus HOM05D007220 ORTHO05D009058 1.2e-26 124.0 129 54.3
ECA233G2338 Erigeron canadensis HOM05D007220 ORTHO05D009058 4.5e-26 122.1 158 49.4
Lj8A39T34 Lonicera japonica HOM05D007220 ORTHO05D009058 4.5e-26 122.1 195 43.6
Psat7g150000 Pisum sativum HOM05D007220 ORTHO05D009058 5.9e-26 121.7 181 43.6
Sopen03g023380 Solanum pennellii HOM05D007220 ORTHO05D009058 1.0e-25 120.9 110 57.3
Peaxi162Scf00241g00624 Petunia axillaris HOM05D007220 ORTHO05D009058 2.3e-25 119.8 133 51.1
Thhalv10015015m.g Eutrema salsugineum HOM05D007220 ORTHO05D009058 2.9e-25 119.4 115 61.7
PSO782G3417 Papaver somniferum HOM05D007220 ORTHO05D009058 1.9e-24 116.7 113 54.0
Zm00001eb230760 Zea mays HOM05D007220 ORTHO05D009058 3.3e-24 115.9 148 50.0
PSO478G4327 Papaver somniferum HOM05D007220 ORTHO05D009058 7.2e-24 114.8 113 53.1
arahy.Tifrunner.gnm1.ann1.83G6QR Arachis hypogaea HOM05D007220 ORTHO05D009058 2.8e-23 112.8 85 64.7
SEGI_29714 Sequoiadendron giganteum HOM05D007220 ORTHO05D009058 1.4e-22 110.5 150 48.0
Sed0003033 Sechium edule HOM05D007220 ORTHO05D009058 4.9e-20 102.1 156 48.1
ATR0730G016 Amborella trichopoda HOM05D007220 ORTHO05D009058 1.1e-19 100.9 115 52.2
HPP92_002073 Vanilla planifolia HOM05D007220 ORTHO05D009058 2.4e-19 99.8 206 36.4
TPR.G15117 Trifolium pratense HOM05D007220 ORTHO05D009058 4.1e-19 99.0 71 64.8
AUR62035102 Chenopodium quinoa HOM05D007220 ORTHO05D009058 1.7e-17 93.6 199 37.2
Prupe.2G280700 Prunus persica HOM05D007220 ORTHO05D009058 2.9e-17 92.8 148 45.3
Potri.012G128000 Populus trichocarpa HOM05D007220 ORTHO05D009058 6.6e-17 91.7 193 37.8
PGSC0003DMG400023001 Solanum tuberosum HOM05D007220 ORTHO05D009058 7.3e-16 88.2 177 35.0
DCAR_009422 Daucus carota HOM05D007220 ORTHO05D009058 5.2e-14 82.0 165 41.2
DCAR_009423 Daucus carota HOM05D007220 ORTHO05D009058 5.2e-14 82.0 165 41.2
MD07G1256600 Malus domestica HOM05D007220 ORTHO05D009058 2.9e-12 76.3 53 64.2
TAR629G2293 Trochodendron aralioides HOM05D007220 ORTHO05D009058 2.9e-12 76.3 97 44.3
Mapoly0002s0242 Marchantia polymorpha HOM05D007220 ORTHO05D009058 2.4e-11 73.2 77 45.5
Pp3c26_11240 Physcomitrium patens HOM05D007220 ORTHO05D009058 3.5e-10 69.3 127 40.2
HanXRQChr04g0107801 Helianthus annuus HOM05D000901 ORTHO05D001160 4.6e-10 68.9 147 36.7
MBI12_g20320_MAGBIO Magnolia biondii HOM05D007220 ORTHO05D009058 7.8e-10 68.2 44 68.2
AagrBONN_evm.TU.Sc2ySwM_228.5821 Anthoceros agrestis HOM05D007220 ORTHO05D009058 1.0e-09 67.8 173 32.9
MBI12_g14970_MAGBIO Magnolia biondii HOM05D007220 ORTHO05D009058 1.9e-08 63.5 55 58.2
Ca_20051_v3 Cicer arietinum L. HOM05D007220 ORTHO05D009058 3.3e-08 62.8 125 39.2


User provided reference genes

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