Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT5G51130 Arabidopsis thaliana HOM05D004971 ORTHO05D006289 3.2e-165 585.1 319 100.0
AL8G25390 Arabidopsis lyrata HOM05D004971 ORTHO05D006289 1.6e-156 556.2 319 91.5
Carub.0008s1117 Capsella rubella HOM05D004971 ORTHO05D006289 1.2e-143 513.5 340 82.1
CARHR256940 Cardamine hirsuta HOM05D004971 ORTHO05D006289 1.0e-134 483.8 265 89.4
Thhalv10014188m.g Eutrema salsugineum HOM05D004971 ORTHO05D006289 3.3e-133 478.8 262 89.7
Sp6g13340 Schrenkiella parvula HOM05D004971 ORTHO05D006289 1.2e-130 470.3 263 87.5
BraA02t06311Z Brassica rapa HOM05D004971 ORTHO05D006289 2.6e-130 469.2 263 86.7
A02p12480 Brassica napus HOM05D004971 ORTHO05D006289 9.9e-130 467.2 262 86.6
Aa31LG3G7640 Aethionema arabicum HOM05D004971 ORTHO05D006289 8.3e-129 464.2 319 75.5
BcaC03g14623 Brassica carinata HOM05D004971 ORTHO05D006289 2.1e-127 459.5 262 84.7
BolC2t08195H Brassica oleracea HOM05D004971 ORTHO05D006289 2.1e-127 459.5 262 84.7
C02p20580 Brassica napus HOM05D004971 ORTHO05D006289 2.3e-126 456.1 262 84.4
BcaB05g24018 Brassica carinata HOM05D004971 ORTHO05D006289 8.1e-124 447.6 262 83.6
THA.LOC104811095 Tarenaya hassleriana HOM05D004971 ORTHO05D006289 1.4e-123 446.8 321 70.1
C03p19180 Brassica napus HOM05D004971 ORTHO05D006289 1.5e-122 443.4 320 71.9
BcaC01g06098 Brassica carinata HOM05D004971 ORTHO05D006289 1.2e-119 433.7 263 81.7
BolC3t14306H Brassica oleracea HOM05D004971 ORTHO05D006289 1.2e-119 433.7 263 81.7
BcaC01g06076 Brassica carinata HOM05D004971 ORTHO05D006289 2.3e-118 429.5 263 81.7
A03p16290 Brassica napus HOM05D004971 ORTHO05D006289 9.6e-117 424.1 262 80.9
BraA03t10920Z Brassica rapa HOM05D004971 ORTHO05D006289 9.9e-114 414.1 263 79.1
CANSAT56G2306 Cannabis sativa HOM05D004971 ORTHO05D006289 9.6e-101 370.9 269 64.7
CANSAT56G1645 Cannabis sativa HOM05D004971 ORTHO05D006289 2.4e-99 366.3 269 64.3
Lalb_Chr05g0223101 Lupinus albus HOM05D004971 ORTHO05D006289 2.0e-98 363.2 269 63.6
Potri.018G084700 Populus trichocarpa HOM05D004971 ORTHO05D006289 3.4e-98 362.5 267 65.2
CiPaw.03G227700 Carya illinoinensis HOM05D004971 ORTHO05D006289 1.7e-97 360.1 267 65.9
Atru.chr7.1418 Acer truncatum HOM05D004971 ORTHO05D006289 4.9e-97 358.6 270 64.4
VMungo0251G3379 Vigna mungo HOM05D004971 ORTHO05D006289 1.4e-96 357.1 269 63.9
Prupe.7G224700 Prunus persica HOM05D004971 ORTHO05D006289 1.9e-96 356.7 265 63.4
Thecc.09G104800 Theobroma cacao HOM05D004971 ORTHO05D006289 1.9e-96 356.7 270 63.7
Sabra18G0073100 Salix brachista HOM05D004971 ORTHO05D006289 4.2e-96 355.5 265 64.9
Glyma.08G035500 Glycine max HOM05D004971 ORTHO05D006289 7.9e-95 351.3 269 61.7
PGR102G0147 Punica granatum HOM05D004971 ORTHO05D006289 1.3e-94 350.5 253 67.2
QL01p004043 Quercus lobata HOM05D004971 ORTHO05D006289 1.3e-94 350.5 265 65.3
RcHm_v2.0_Chr2g0091361 Rosa chinensis HOM05D004971 ORTHO05D006289 1.3e-94 350.5 268 62.3
Phvul.002G310900 Phaseolus vulgaris HOM05D004971 ORTHO05D006289 3.9e-94 349.0 268 62.7
GSVIVG01015340001 Vitis vinifera HOM05D004971 ORTHO05D006289 1.1e-93 347.4 271 63.1
MD15G1192600 Malus domestica HOM05D004971 ORTHO05D006289 1.9e-93 346.7 264 62.1
Medtr8g102950 Medicago truncatula HOM05D004971 ORTHO05D006289 4.1e-91 339.0 267 61.8
Eucgr.C03795 Eucalyptus grandis HOM05D004971 ORTHO05D006289 1.5e-90 337.0 270 60.7
CSS0031404 Camellia sinensis var. sinensis HOM05D004971 ORTHO05D006289 4.5e-90 335.5 271 62.4
FvH4_1g05710 Fragaria vesca HOM05D004971 ORTHO05D006289 7.6e-90 334.7 266 59.8
Dinv41645 Davidia involucrata HOM05D004971 ORTHO05D006289 1.3e-89 334.0 267 61.8
Gohir.D07G007800 Gossypium hirsutum HOM05D004971 ORTHO05D006289 2.2e-89 333.2 271 60.1
Gorai.001G007500 Gossypium raimondii HOM05D004971 ORTHO05D006289 2.2e-89 333.2 271 60.1
FAN19G1252 Fragaria x ananassa HOM05D001382 ORTHO05D001266 5.0e-89 332.0 261 60.5
FAN28G1806 Fragaria x ananassa HOM05D001382 ORTHO05D006289 5.0e-89 332.0 264 60.2
FAN26G3039 Fragaria x ananassa HOM05D001382 ORTHO05D001266 6.5e-89 331.6 264 60.2
arahy.Tifrunner.gnm1.ann1.050WC1 Arachis hypogaea HOM05D004971 ORTHO05D006289 1.1e-88 330.9 278 57.9
FAN23G0317 Fragaria x ananassa HOM05D001382 ORTHO05D006289 1.4e-88 330.5 265 59.6
TPR.G23453 Trifolium pratense HOM05D004971 ORTHO05D006289 1.4e-88 330.5 270 60.4
ECA240G1764 Erigeron canadensis HOM05D004971 ORTHO05D006289 1.9e-88 330.1 291 57.0
Lj4g0001585 Lotus japonicus HOM05D004971 ORTHO05D006289 3.2e-88 329.3 269 59.9
AUR62021639 Chenopodium quinoa HOM05D004971 ORTHO05D006289 4.2e-88 328.9 268 60.8
MSTRG.19566 Avicennia marina HOM05D004971 ORTHO05D006289 7.2e-88 328.2 271 60.9
Gohir.A07G004400 Gossypium hirsutum HOM05D004971 ORTHO05D006289 9.3e-88 327.8 271 59.0
Hund26242 Selenicereus undatus HOM05D004971 ORTHO05D006289 1.2e-87 327.4 266 59.8
HanXRQChr09g0239411 Helianthus annuus HOM05D004971 ORTHO05D006289 1.6e-87 327.0 266 60.2
Nitab4.5_0000066g0130 Nicotiana tabacum HOM05D004971 ORTHO05D006289 1.6e-87 327.0 271 59.8
Nn3g18146 Nelumbo nucifera HOM05D004971 ORTHO05D006289 7.9e-87 324.7 270 59.3
Rhsim03G0239000 Rhododendron simsii HOM05D004971 ORTHO05D006289 7.9e-87 324.7 262 61.1
Solyc05g050000.3 Solanum lycopersicum HOM05D004971 ORTHO05D006289 7.9e-87 324.7 267 60.3
Lsat_1_v5_gn_7_41360 Lactuca sativa HOM05D004971 ORTHO05D006289 1.8e-86 323.6 265 58.5
Psat7g014440 Pisum sativum HOM05D004971 ORTHO05D006289 2.5e-85 319.7 254 61.8
Sopen05g028390 Solanum pennellii HOM05D004971 ORTHO05D006289 3.3e-85 319.3 269 59.1
Nitab4.5_0003331g0010 Nicotiana tabacum HOM05D004971 ORTHO05D006289 4.3e-85 318.9 267 59.2
ClCG06G008900 Citrullus lanatus HOM05D004971 ORTHO05D006289 5.7e-85 318.5 261 59.4
SGA_v2.0_scaffold20G09148 Striga asiatica HOM05D004971 ORTHO05D006289 5.7e-85 318.5 266 59.8
TAR636G2606 Trochodendron aralioides HOM05D004971 ORTHO05D006289 5.7e-85 318.5 270 58.1
TAR626G1908 Trochodendron aralioides HOM05D001382 ORTHO05D006289 7.4e-85 318.2 270 58.1
SGA_v2.0_scaffold22G09903 Striga asiatica HOM05D004971 ORTHO05D006289 1.6e-84 317.0 268 58.2
Cc06_g10130 Coffea canephora HOM05D004971 ORTHO05D006289 2.8e-84 316.2 261 59.8
Oeu000366.2 Olea europaea HOM05D004971 ORTHO05D006289 3.7e-84 315.8 287 56.4
COL.COLO4_34800 Corchorus olitorius HOM05D004971 ORTHO05D006289 4.8e-84 315.5 243 61.3
TWI12G1172 Tripterygium wilfordii HOM05D004971 ORTHO05D006289 4.8e-84 315.5 264 57.6
arahy.Tifrunner.gnm1.ann1.R8N6MQ Arachis hypogaea HOM05D004971 ORTHO05D006289 1.4e-83 313.9 279 56.6
PSO541G6366 Papaver somniferum HOM05D004971 ORTHO05D006289 6.9e-83 311.6 267 58.1
Migut.J01131 Erythranthe guttata HOM05D004971 ORTHO05D006289 1.2e-82 310.8 264 58.7
Os08g0540500 Oryza sativa ssp. japonica HOM05D004971 ORTHO05D006289 2.6e-82 309.7 259 55.6
unitig_748.g8739 Utricularia gibba HOM05D004971 ORTHO05D006289 4.5e-82 308.9 266 57.1
Sc08g0007770 Simmondsia chinensis HOM05D004971 ORTHO05D006289 5.9e-82 308.5 269 56.9
PSO675G4950 Papaver somniferum HOM05D004971 ORTHO05D006289 7.7e-82 308.1 267 57.3
Thhalv10027350m.g Eutrema salsugineum HOM05D004971 ORTHO05D006289 2.9e-81 306.2 221 73.3
Aqoxy7G01513 Aquilegia oxysepala HOM05D004971 ORTHO05D006289 3.6e-79 299.3 267 55.1
Peaxi162Scf00539g00614 Petunia axillaris HOM05D004971 ORTHO05D006289 4.6e-79 298.9 268 56.0
PGSC0003DMG400021659 Solanum tuberosum HOM05D004971 ORTHO05D006289 3.9e-78 295.8 251 58.6
SHI02711 Sapria himalayana HOM05D004971 ORTHO05D006289 2.5e-77 293.1 265 58.1
CAN.G399.3 Capsicum annuum HOM05D004971 ORTHO05D006289 4.3e-77 292.4 247 59.1
Thhalv10006518m.g Eutrema salsugineum HOM05D004971 ORTHO05D006289 4.3e-77 292.4 215 69.3
Thhalv10027230m.g Eutrema salsugineum HOM05D004971 ORTHO05D006289 4.3e-77 292.4 215 69.3
Cfa003218 Carpinus fangiana HOM05D001382 ORTHO05D001266 9.7e-77 291.2 216 63.9
CsaV3_1G020790 Cucumis sativus L. HOM05D004971 ORTHO05D006289 3.7e-76 289.3 263 55.5
Oeu017816.1 Olea europaea HOM05D004971 ORTHO05D006289 3.7e-76 289.3 242 60.3
Thhalv10026861m.g Eutrema salsugineum HOM05D004971 ORTHO05D006289 3.1e-75 286.2 215 68.4
Thhalv10027410m.g Eutrema salsugineum HOM05D004971 ORTHO05D006289 3.1e-75 286.2 215 68.4
HanXRQChr03g0061421 Helianthus annuus HOM05D004971 ORTHO05D006289 3.1e-75 286.2 249 55.8
Lj7A659G31 Lonicera japonica HOM05D004971 ORTHO05D006289 3.1e-75 286.2 239 60.3
HPP92_012921 Vanilla planifolia HOM05D004971 ORTHO05D006289 3.1e-75 286.2 272 52.9
AUR62008451 Chenopodium quinoa HOM05D004971 ORTHO05D006289 4.1e-75 285.8 268 56.0
Actinidia32663 Actinidia chinensis HOM05D004971 ORTHO05D006289 5.3e-75 285.4 271 54.6
Sed0000382 Sechium edule HOM05D004971 ORTHO05D006289 5.3e-75 285.4 239 59.0
Ciclev10009268m.g Citrus clementina HOM05D004971 ORTHO05D006289 1.5e-74 283.9 299 50.5
HPP92_012900 Vanilla planifolia HOM05D004971 ORTHO05D006289 4.5e-74 282.3 268 52.2
MELO3C024707.2 Cucumis melo HOM05D004971 ORTHO05D006289 1.3e-73 280.8 259 54.4
Manes.16G112100 Manihot esculenta HOM05D004971 ORTHO05D006289 2.1e-71 273.5 212 63.2
vmacro06238 Vaccinium macrocarpon HOM05D004971 ORTHO05D006289 5.1e-70 268.9 300 48.7
AagrBONN_evm.TU.Sc2ySwM_117.3390 Anthoceros agrestis HOM05D004971 ORTHO05D006289 3.3e-69 266.2 257 49.8
DCAR_028679 Daucus carota HOM05D004971 ORTHO05D006289 9.1e-67 258.1 248 55.2
Mapoly0002s0233 Marchantia polymorpha HOM05D004971 ORTHO05D006289 2.7e-63 246.5 296 44.3
Lalb_Chr14g0371731 Lupinus albus HOM05D004971 ORTHO05D006289 3.6e-63 246.1 256 50.0
Duzib150G1337 Durio zibethinus HOM05D004971 ORTHO05D006289 2.3e-62 243.4 191 61.3
SMO232G0003 Selaginella moellendorffii HOM05D004971 ORTHO05D006289 8.8e-62 241.5 265 43.4
CDE11G0552 Ceratophyllum demersum HOM05D004971 ORTHO05D006289 1.5e-61 240.7 264 48.1
SEGI_33858 Sequoiadendron giganteum HOM05D004971 ORTHO05D006289 2.0e-61 240.4 335 40.3
SMO241G0030 Selaginella moellendorffii HOM05D004971 ORTHO05D006289 7.0e-59 231.9 272 43.4
Nitab4.5_0002165g0080 Nicotiana tabacum HOM05D004971 ORTHO05D006289 5.2e-54 215.7 265 44.2
Pp3c17_15270 Physcomitrium patens HOM05D004971 ORTHO05D006289 2.6e-53 213.4 276 39.5
CSS0049746 Camellia sinensis var. sinensis HOM05D004971 ORTHO05D006289 3.7e-52 209.5 196 56.6
Lalb_Chr24g0397391 Lupinus albus HOM05D004971 ORTHO05D006289 7.7e-50 201.8 191 49.7
ATR0315G075 Amborella trichopoda HOM05D004971 ORTHO05D006289 7.5e-45 185.3 208 46.6
MD02G1058100 Malus domestica HOM05D004971 ORTHO05D006289 8.3e-44 181.8 245 40.8
CDE05G3470 Ceratophyllum demersum HOM05D004971 ORTHO05D006289 1.0e-41 174.9 123 65.9
Ca_17315_v3 Cicer arietinum L. HOM05D004971 ORTHO05D006289 1.2e-39 167.9 159 55.3
CBR_g687 Chara braunii HOM05D004971 ORTHO05D006289 4.7e-39 166.0 425 27.8
MCO09G154 Micromonas commoda HOM05D004971 ORTHO05D006289 1.8e-38 164.1 292 33.2
EL10Ac8g18422 Beta vulgaris HOM05D004971 ORTHO05D006289 4.4e-37 159.5 145 57.9
Zm00001eb198370 Zea mays HOM05D004971 ORTHO05D006289 4.6e-34 149.4 157 49.0
Haze_02526 Corylus avellana HOM05D004971 ORTHO05D006289 5.9e-34 149.1 130 56.9
MBI04_g02609_MAGBIO Magnolia biondii HOM05D004971 ORTHO05D000022 5.2e-30 136.0 143 50.3
PRCOL_00000240 Prasinoderma coloniale HOM05D004971 ORTHO05D006289 2.0e-29 134.0 303 30.0
Haze_02523 Corylus avellana HOM05D004971 ORTHO05D006289 2.6e-29 133.7 120 55.8
Cre15.g636450 Chlamydomonas reinhardtii HOM05D004971 ORTHO05D006289 7.5e-29 132.1 386 27.2
Lj4g0009518 Lotus japonicus HOM05D004971 ORTHO05D006289 6.4e-28 129.0 76 72.4
arahy.Tifrunner.gnm1.ann1.D57MTL Arachis hypogaea HOM05D004971 ORTHO05D006289 3.3e-24 116.7 151 43.0
Cpa.g.sc40.24 Carica papaya HOM05D004971 ORTHO05D006289 1.8e-22 110.9 53 86.8
arahy.Tifrunner.gnm1.ann1.2J0XRF Arachis hypogaea HOM05D004971 ORTHO05D006289 4.4e-21 106.3 151 39.1
CSS0032398 Camellia sinensis var. sinensis HOM05D004971 ORTHO05D006289 1.1e-19 101.7 58 75.9
Nitab4.5_0002165g0090 Nicotiana tabacum HOM05D004971 ORTHO05D006289 1.0e-17 95.1 57 68.4
Lalb_Chr24g0397371 Lupinus albus HOM05D004971 ORTHO05D006289 1.5e-16 91.3 135 40.0
MBI19_g42779_MAGBIO Magnolia biondii HOM05D004971 ORTHO05D006289 3.3e-16 90.1 165 35.8
Actinidia07401 Actinidia chinensis HOM05D004971 ORTHO05D006289 1.6e-15 87.8 48 79.2
MBI19_g24589_MAGBIO Magnolia biondii HOM05D004971 ORTHO05D006289 9.9e-13 78.6 194 30.9
Nitab4.5_0001706g0070 Nicotiana tabacum HOM05D004971 ORTHO05D006289 3.2e-11 73.6 111 38.7
FvH4_7g02480 Fragaria vesca HOM05D004971 ORTHO05D022553 1.1e-08 65.1 38 71.1
FvH4_7g02600 Fragaria vesca HOM05D004971 ORTHO05D022553 1.1e-08 65.1 38 71.1
Nitab4.5_0001706g0080 Nicotiana tabacum HOM05D004971 ORTHO05D006289 1.6e-07 61.2 29 86.2
CiPaw.05G218700 Carya illinoinensis HOM05D004971 ORTHO05D006289 1.1e-06 58.5 32 75.0
MBI19_g24592_MAGBIO Magnolia biondii HOM05D004971 ORTHO05D006289 1.4e-06 58.2 38 57.9
Haze_02522 Corylus avellana HOM05D004971 ORTHO05D006289 5.2e-06 56.2 87 35.6


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