Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT5G50410 Arabidopsis thaliana HOM05D007169 ORTHO05D007243 2.2e-143 512.3 260 100.0
AL8G24630 Arabidopsis lyrata HOM05D007169 ORTHO05D007243 1.8e-134 482.6 257 95.7
Carub.0008s1052 Capsella rubella HOM05D007169 ORTHO05D007243 2.3e-132 475.7 257 94.2
Sp6g12560 Schrenkiella parvula HOM05D007169 ORTHO05D007243 1.4e-121 439.9 263 87.5
SpUn0015_0080 Schrenkiella parvula HOM05D007169 ORTHO05D007243 1.4e-121 439.9 263 87.5
SpUn0039_0020 Schrenkiella parvula HOM05D007169 ORTHO05D007243 1.4e-121 439.9 263 87.5
Thhalv10014456m.g Eutrema salsugineum HOM05D007169 ORTHO05D007243 8.9e-121 437.2 262 84.4
Aa31LG3G6930 Aethionema arabicum HOM05D007169 ORTHO05D007243 8.6e-116 420.6 256 85.5
BolC2t08225H Brassica oleracea HOM05D007169 ORTHO05D007243 4.9e-111 404.8 259 82.6
A02p12790 Brassica napus HOM05D007169 ORTHO05D007243 9.2e-110 400.6 259 81.5
BraA02t06336Z Brassica rapa HOM05D007169 ORTHO05D007243 9.2e-110 400.6 259 81.5
BcaC03g14651 Brassica carinata HOM05D007169 ORTHO05D007243 1.2e-109 400.2 259 81.5
BcaB05g24052 Brassica carinata HOM05D007169 ORTHO05D007243 2.1e-109 399.4 259 79.9
C02p20850 Brassica napus HOM05D007169 ORTHO05D007243 6.0e-109 397.9 255 82.4
CARHR257950 Cardamine hirsuta HOM05D007169 ORTHO05D007243 2.8e-106 389.0 260 77.3
THA.LOC104803148 Tarenaya hassleriana HOM05D007169 ORTHO05D007243 4.0e-97 358.6 271 73.1
Cpa.g.sc13.118 Carica papaya HOM05D007169 ORTHO05D007243 6.7e-76 288.1 258 59.3
Duzib068G0521 Durio zibethinus HOM05D007169 ORTHO05D007243 2.9e-71 272.7 261 55.6
Thecc.03G128900 Theobroma cacao HOM05D007169 ORTHO05D007243 2.9e-71 272.7 256 57.0
Ciclev10018838m.g Citrus clementina HOM05D003858 ORTHO05D005878 2.3e-68 263.1 229 60.3
Gohir.D09G247400 Gossypium hirsutum HOM05D007169 ORTHO05D007243 9.7e-67 257.7 261 54.4
Gorai.006G271900 Gossypium raimondii HOM05D007169 ORTHO05D007243 9.7e-67 257.7 261 54.4
Manes.01G190300 Manihot esculenta HOM05D007169 ORTHO05D007243 9.7e-67 257.7 255 56.9
Gohir.A09G246900 Gossypium hirsutum HOM05D007169 ORTHO05D007243 2.8e-66 256.1 258 54.7
Sabra15G0116800 Salix brachista HOM05D007169 ORTHO05D007243 1.4e-65 253.8 262 55.7
TWI23G0849 Tripterygium wilfordii HOM05D007169 ORTHO05D007243 4.1e-65 252.3 265 53.6
Potri.015G096000 Populus trichocarpa HOM05D007169 ORTHO05D007243 1.5e-64 250.4 262 54.2
Potri.012G097500 Populus trichocarpa HOM05D007169 ORTHO05D007243 5.9e-64 248.4 227 58.1
Atru.chr9.1127 Acer truncatum HOM05D007169 ORTHO05D007243 7.7e-64 248.1 266 51.1
Prupe.5G151300 Prunus persica HOM05D007169 ORTHO05D007243 7.7e-64 248.1 266 51.5
FvH4_5g08300 Fragaria vesca HOM05D007169 ORTHO05D007243 3.8e-63 245.7 218 57.3
arahy.Tifrunner.gnm1.ann1.NVZ1RT Arachis hypogaea HOM05D007169 ORTHO05D007243 6.5e-63 245.0 219 58.4
arahy.Tifrunner.gnm1.ann1.ZT3MCZ Arachis hypogaea HOM05D007169 ORTHO05D007243 6.5e-63 245.0 219 58.4
Eucgr.K02727 Eucalyptus grandis HOM05D007169 ORTHO05D007243 1.1e-62 244.2 240 51.7
RcHm_v2.0_Chr7g0190221 Rosa chinensis HOM05D007169 ORTHO05D007243 2.5e-62 243.0 241 53.1
Lj1g0026378 Lotus japonicus HOM05D007169 ORTHO05D007243 4.2e-62 242.3 218 58.7
Ca_16044_v3 Cicer arietinum L. HOM05D007169 ORTHO05D007243 1.2e-61 240.7 228 54.4
FAN04G2393 Fragaria x ananassa HOM05D007169 ORTHO05D007243 1.2e-61 240.7 236 55.1
QL10p002966 Quercus lobata HOM05D007169 ORTHO05D007243 6.1e-61 238.4 260 51.5
Phvul.009G166500 Phaseolus vulgaris HOM05D007169 ORTHO05D007243 1.4e-60 237.3 220 56.4
FAN18G0310 Fragaria x ananassa HOM05D007169 ORTHO05D007243 1.8e-60 236.9 231 54.5
CiPaw.12G042700 Carya illinoinensis HOM05D007169 ORTHO05D007243 8.8e-60 234.6 256 51.6
CsaV3_1G009620 Cucumis sativus L. HOM05D007169 ORTHO05D007243 1.5e-59 233.8 257 53.3
ClCG03G003730 Citrullus lanatus HOM05D007169 ORTHO05D007243 5.7e-59 231.9 250 52.8
MELO3C002358.2 Cucumis melo HOM05D007169 ORTHO05D007243 1.7e-58 230.3 262 52.7
Gorai.004G276100 Gossypium raimondii HOM05D007169 ORTHO05D007243 3.7e-58 229.2 210 58.1
Psat5g051240 Pisum sativum HOM05D007169 ORTHO05D007243 4.8e-58 228.8 237 52.3
TPR.G14220 Trifolium pratense HOM05D007169 ORTHO05D007243 6.3e-58 228.4 229 51.1
Glyma.06G170200 Glycine max HOM05D007169 ORTHO05D007243 8.2e-58 228.0 254 50.8
PGR044G0546 Punica granatum HOM05D007169 ORTHO05D007243 1.1e-57 227.6 256 48.4
Sed0023866 Sechium edule HOM05D007169 ORTHO05D007243 1.1e-57 227.6 239 54.0
Lalb_Chr08g0237141 Lupinus albus HOM05D007169 ORTHO05D007243 6.9e-57 224.9 254 51.6
Medtr3g099350 Medicago truncatula HOM05D007169 ORTHO05D007243 4.5e-56 222.2 232 50.9
RhsimUnG0231000 Rhododendron simsii HOM05D007169 ORTHO05D007243 4.5e-56 222.2 247 48.6
MD06G1142100 Malus domestica HOM05D007169 ORTHO05D007243 6.5e-55 218.4 268 45.1
CANSAT80G1416 Cannabis sativa HOM05D007169 ORTHO05D007243 3.6e-53 212.6 235 53.2
MD14G1157400 Malus domestica HOM05D007169 ORTHO05D007243 7.9e-53 211.5 311 42.4
Sed0005692 Sechium edule HOM05D007169 ORTHO05D007243 4.4e-51 205.7 247 48.2
GSVIVG01008542001 Vitis vinifera HOM05D003858 ORTHO05D005878 5.7e-51 205.3 232 48.7
Gohir.D08G258666 Gossypium hirsutum HOM05D007169 ORTHO05D007243 2.2e-50 203.4 157 64.3
Gorai.008G206100 Gossypium raimondii HOM05D007169 ORTHO05D007243 4.8e-50 202.2 216 52.3
Gohir.D12G191801 Gossypium hirsutum HOM05D007169 ORTHO05D007243 1.8e-49 200.3 216 51.9
Nn3g16473 Nelumbo nucifera HOM05D007169 ORTHO05D007243 1.8e-49 200.3 254 46.1
Sc04g0000670 Simmondsia chinensis HOM05D007169 ORTHO05D007243 2.6e-48 196.4 225 47.6
Hma1.2p1_0014F.1_g009470 Hydrangea macrophylla HOM05D007169 ORTHO05D007243 1.3e-47 194.1 228 47.8
VMungo1309G2045 Vigna mungo HOM05D007169 ORTHO05D007243 2.2e-47 193.4 178 55.6
Cfa018798 Carpinus fangiana HOM05D007169 ORTHO05D007243 5.0e-47 192.2 212 51.9
TAR371G0734 Trochodendron aralioides HOM05D007169 ORTHO05D007243 9.4e-46 188.0 245 44.5
Haze_07134 Corylus avellana HOM05D007169 ORTHO05D007243 1.2e-45 187.6 212 50.0
Rhsim08G0190100 Rhododendron simsii HOM05D007169 ORTHO05D007243 1.2e-45 187.6 223 47.1
CANSAT80G0844 Cannabis sativa HOM05D007169 ORTHO05D007243 3.6e-45 186.0 154 61.0
HanXRQChr02g0034741 Helianthus annuus HOM05D007169 ORTHO05D007243 3.6e-45 186.0 227 43.6
Lsat_1_v5_gn_1_28980 Lactuca sativa HOM05D007169 ORTHO05D007243 1.8e-44 183.7 260 41.5
Medtr2g045120 Medicago truncatula HOM05D007169 ORTHO05D007243 5.2e-44 182.2 180 52.2
Medtr2g445400 Medicago truncatula HOM05D007169 ORTHO05D007243 5.2e-44 182.2 180 52.2
Lalb_Chr23g0273701 Lupinus albus HOM05D007169 ORTHO05D007243 1.2e-43 181.0 217 46.5
COL.COLO4_28120 Corchorus olitorius HOM05D007169 ORTHO05D007243 1.1e-41 174.5 255 43.5
Dinv23144 Davidia involucrata HOM05D007169 ORTHO05D007243 1.8e-41 173.7 194 49.5
ECA247G3219 Erigeron canadensis HOM05D007169 ORTHO05D007243 3.1e-41 172.9 225 41.8
CSS0048648 Camellia sinensis var. sinensis HOM05D007169 ORTHO05D007243 5.9e-40 168.7 142 60.6
SalBow5G3517 Salvia bowleyana HOM05D007169 ORTHO05D007243 7.7e-40 168.3 154 55.2
vmacro07808 Vaccinium macrocarpon HOM05D007169 ORTHO05D007243 1.3e-39 167.5 220 41.8
Oeu006492.1 Olea europaea HOM05D007169 ORTHO05D007243 1.7e-39 167.2 139 61.2
SalBow5G4624 Salvia bowleyana HOM05D007169 ORTHO05D007243 2.9e-39 166.4 154 54.5
TAR374G1569 Trochodendron aralioides HOM05D007169 ORTHO05D007243 2.9e-39 166.4 272 37.9
Actinidia18344 Actinidia chinensis HOM05D007169 ORTHO05D007243 5.0e-39 165.6 148 57.4
MSTRG.11390 Avicennia marina HOM05D007169 ORTHO05D007243 6.5e-39 165.2 147 57.1
AUR62029615 Chenopodium quinoa HOM05D007169 ORTHO05D007243 6.5e-39 165.2 154 55.8
DCAR_016391 Daucus carota HOM05D007169 ORTHO05D007243 1.1e-38 164.5 187 49.7
EL10Ac5g11418 Beta vulgaris HOM05D007169 ORTHO05D007243 1.9e-38 163.7 136 59.6
TAR622G0369 Trochodendron aralioides HOM05D007169 ORTHO05D007243 2.5e-38 163.3 166 50.0
DCAR_021617 Daucus carota HOM05D007169 ORTHO05D007243 3.2e-38 162.9 211 43.6
Lj5A96T48 Lonicera japonica HOM05D007169 ORTHO05D007243 1.6e-37 160.6 152 52.6
Peaxi162Scf00089g01624 Petunia axillaris HOM05D007169 ORTHO05D007243 6.1e-37 158.7 141 58.2
SGA_v2.0_scaffold56G20032 Striga asiatica HOM05D007169 ORTHO05D007243 1.4e-36 157.5 143 54.5
Migut.I00155 Erythranthe guttata HOM05D007169 ORTHO05D007243 2.3e-36 156.8 140 55.0
Solyc03g112570.2 Solanum lycopersicum HOM05D007169 ORTHO05D007243 6.8e-36 155.2 148 58.1
Ah.02g111120 Amaranthus hybridus HOM05D007169 ORTHO05D007243 8.8e-36 154.8 136 58.1
Sopen03g031630 Solanum pennellii HOM05D007169 ORTHO05D007243 8.8e-36 154.8 148 56.1
PGSC0003DMG400018172 Solanum tuberosum HOM05D007169 ORTHO05D007243 1.2e-35 154.5 148 55.4
FAN08G0105 Fragaria x ananassa HOM05D007169 ORTHO05D007243 2.0e-35 153.7 129 58.1
Aqoxy3G00802 Aquilegia oxysepala HOM05D007169 ORTHO05D007243 5.7e-35 152.1 172 45.3
PSO478G3704 Papaver somniferum HOM05D007169 ORTHO05D007243 9.8e-35 151.4 155 51.6
CAN.G338.2 Capsicum annuum HOM05D007169 ORTHO05D007243 8.3e-34 148.3 142 55.6
Cc06_g22780 Coffea canephora HOM05D007169 ORTHO05D007243 4.1e-33 146.0 142 53.5
HPP92_011766 Vanilla planifolia HOM05D007169 ORTHO05D007243 2.7e-32 143.3 212 39.2
PSO017G4677 Papaver somniferum HOM05D007169 ORTHO05D007243 5.9e-32 142.1 180 44.4
ATR0561G062 Amborella trichopoda HOM05D011398 ORTHO05D007243 1.1e-30 137.9 231 35.9
unitig_0.g2530 Utricularia gibba HOM05D007169 ORTHO05D007243 4.2e-30 136.0 149 47.0
HPP92_011770 Vanilla planifolia HOM05D007169 ORTHO05D007243 9.5e-30 134.8 175 42.9
Os08g0531200 Oryza sativa ssp. japonica HOM05D011398 ORTHO05D007243 5.2e-28 129.0 246 35.8
Zm00001eb175120 Zea mays HOM05D011398 ORTHO05D007243 1.8e-25 120.6 171 39.8
Hund26053 Selenicereus undatus HOM05D007169 ORTHO05D007243 4.1e-25 119.4 90 61.1
SEGI_24222 Sequoiadendron giganteum HOM05D007169 ORTHO05D007243 2.8e-21 106.7 78 59.0
Nitab4.5_0011992g0030 Nicotiana tabacum HOM05D007169 ORTHO05D007243 1.0e-20 104.8 85 60.0
Sabra12G0071300 Salix brachista HOM05D000677 ORTHO05D000727 2.2e-18 97.1 78 61.5
arahy.Tifrunner.gnm1.ann1.M1N3UH Arachis hypogaea HOM05D002218 ORTHO05D007243 1.5e-14 84.3 55 67.3
CBR_g46730 Chara braunii HOM05D011398 ORTHO05D007243 1.5e-11 74.3 71 46.5
Mapoly0022s0039 Marchantia polymorpha HOM05D011398 ORTHO05D007243 6.4e-10 68.9 144 29.2
CBR_g30247 Chara braunii HOM05D011398 ORTHO05D007243 5.4e-09 65.9 74 40.5
Pp3c9_18230 Physcomitrium patens HOM05D011398 ORTHO05D007243 6.6e-07 58.9 67 35.8
AagrBONN_evm.TU.Sc2ySwM_344.3697 Anthoceros agrestis HOM05D011398 ORTHO05D007243 4.3e-06 56.2 64 39.1


User provided reference genes

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