Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT5G50030 Arabidopsis thaliana HOM05D007751 ORTHO05D009813 4.5e-98 361.3 188 100.0
AL8G24030 Arabidopsis lyrata HOM05D007751 ORTHO05D009813 2.0e-93 345.9 188 95.2
Thhalv10014776m.g Eutrema salsugineum HOM05D007751 ORTHO05D009813 2.0e-82 309.3 188 83.0
Carub.0008s0994 Capsella rubella HOM05D007751 ORTHO05D009813 4.2e-80 301.6 188 84.0
CARHR258630 Cardamine hirsuta HOM05D007751 ORTHO05D009813 7.2e-80 300.8 188 83.0
Sp6g11860 Schrenkiella parvula HOM05D007751 ORTHO05D009813 1.7e-76 289.7 188 76.6
A10p08560 Brassica napus HOM05D007751 ORTHO05D009813 2.7e-74 282.3 189 76.7
BraSC37t46147Z Brassica rapa HOM05D007751 ORTHO05D009813 5.9e-74 281.2 189 76.2
Aa31sc47G40 Aethionema arabicum HOM05D007751 ORTHO05D009813 1.4e-62 243.4 182 70.3
BolC9t56709H Brassica oleracea HOM05D007751 ORTHO05D009813 1.9e-56 223.0 161 73.3
Thhalv10026329m.g Eutrema salsugineum HOM05D007751 ORTHO05D009813 6.8e-54 214.5 188 62.2
AL7G28560 Arabidopsis lyrata HOM05D007751 ORTHO05D009813 1.7e-52 209.9 188 60.6
AT4G24640 Arabidopsis thaliana HOM05D007751 ORTHO05D009813 3.7e-52 208.8 188 60.6
Carub.0007s1642 Capsella rubella HOM05D007751 ORTHO05D009813 1.0e-49 200.7 188 57.4
BcaNung04957 Brassica carinata HOM05D007751 ORTHO05D009813 3.9e-49 198.7 188 56.9
C09p38520 Brassica napus HOM05D007751 ORTHO05D009813 3.9e-49 198.7 177 62.7
Sp7g22630 Schrenkiella parvula HOM05D007751 ORTHO05D009813 1.9e-48 196.4 188 57.4
CARHR232030 Cardamine hirsuta HOM05D007751 ORTHO05D009813 2.5e-48 196.1 188 55.9
THA.LOC104799810 Tarenaya hassleriana HOM05D007751 ORTHO05D009813 1.8e-46 189.9 190 56.3
A01p15990 Brassica napus HOM05D007751 ORTHO05D009813 4.0e-46 188.7 188 55.9
BraA01t01533Z Brassica rapa HOM05D007751 ORTHO05D009813 4.0e-46 188.7 188 55.9
C01p19970 Brassica napus HOM05D007751 ORTHO05D009813 6.8e-46 188.0 188 55.3
BcaC09g50845 Brassica carinata HOM05D007751 ORTHO05D009813 1.5e-45 186.8 188 54.8
BolC1t01925H Brassica oleracea HOM05D007751 ORTHO05D009813 1.5e-45 186.8 188 55.3
Sp6g11910 Schrenkiella parvula HOM05D007751 ORTHO05D009813 5.4e-43 178.3 175 58.3
AL8G24060 Arabidopsis lyrata HOM05D007751 ORTHO05D009813 4.6e-42 175.3 178 56.7
THA.LOC104800050 Tarenaya hassleriana HOM05D007751 ORTHO05D009813 4.6e-42 175.3 186 52.2
CARHR257930 Cardamine hirsuta HOM05D007751 ORTHO05D009813 8.6e-41 171.0 175 58.3
Carub.0008s1001 Capsella rubella HOM05D007751 ORTHO05D009813 1.9e-40 169.9 174 52.3
AT5G50040 Arabidopsis thaliana HOM05D007751 ORTHO05D009813 2.5e-40 169.5 175 57.1
AT5G50070 Arabidopsis thaliana HOM05D007751 ORTHO05D009813 4.3e-40 168.7 178 54.5
BraA04t16992Z Brassica rapa HOM05D007751 ORTHO05D009813 5.6e-40 168.3 175 53.7
A04p13370 Brassica napus HOM05D007751 ORTHO05D009813 1.2e-39 167.2 175 53.7
C04p47120 Brassica napus HOM05D007751 ORTHO05D009813 2.1e-39 166.4 175 53.7
AL8G24050 Arabidopsis lyrata HOM05D007751 ORTHO05D009813 2.8e-39 166.0 163 55.8
Carub.0008s1007 Capsella rubella HOM05D007751 ORTHO05D009813 2.8e-39 166.0 175 52.0
BolC4t26306H Brassica oleracea HOM05D007751 ORTHO05D009813 3.6e-39 165.6 175 53.1
Thhalv10015309m.g Eutrema salsugineum HOM05D007751 ORTHO05D009813 8.1e-39 164.5 173 55.5
Aa31sc47G80 Aethionema arabicum HOM05D007751 ORTHO05D009813 1.8e-38 163.3 149 55.0
AL8G24070 Arabidopsis lyrata HOM05D007751 ORTHO05D009813 8.9e-38 161.0 187 50.3
CARHR258610 Cardamine hirsuta HOM05D007751 ORTHO05D009813 1.3e-36 157.1 175 53.1
Carub.0008s0995 Capsella rubella HOM05D007751 ORTHO05D009813 2.2e-36 156.4 177 53.7
Carub.0002s0822 Capsella rubella HOM05D007751 ORTHO05D009813 2.9e-36 156.0 177 50.3
AL8G24040 Arabidopsis lyrata HOM05D007751 ORTHO05D009813 3.7e-36 155.6 179 54.2
Sp6g11920 Schrenkiella parvula HOM05D007751 ORTHO05D009813 3.7e-36 155.6 175 47.4
Carub.0008s1002 Capsella rubella HOM05D007751 ORTHO05D009813 1.1e-35 154.1 178 51.7
AT1G54980 Arabidopsis thaliana HOM05D007751 ORTHO05D009813 1.4e-35 153.7 165 52.1
Sp6g11880 Schrenkiella parvula HOM05D007751 ORTHO05D009813 1.4e-35 153.7 175 50.3
BcaB01g04307 Brassica carinata HOM05D007751 ORTHO05D009813 2.4e-35 152.9 174 50.6
BcaC01g06316 Brassica carinata HOM05D007751 ORTHO05D009813 2.4e-35 152.9 174 50.6
BolC3t14109H Brassica oleracea HOM05D007751 ORTHO05D009813 2.4e-35 152.9 174 50.6
BcaC07g38163 Brassica carinata HOM05D007751 ORTHO05D009813 4.1e-35 152.1 119 66.4
BraA03t10746Z Brassica rapa HOM05D007751 ORTHO05D009813 7.1e-35 151.4 174 50.6
BcaC01g04833 Brassica carinata HOM05D007751 ORTHO05D009813 9.2e-35 151.0 175 48.6
A03p14510 Brassica napus HOM05D007751 ORTHO05D009813 9.2e-35 151.0 174 50.0
C03p33340 Brassica napus HOM05D007751 ORTHO05D009813 9.2e-35 151.0 175 48.0
Carub.0008s0996 Capsella rubella HOM05D007751 ORTHO05D009813 9.2e-35 151.0 175 50.9
CARHR284460 Cardamine hirsuta HOM05D007751 ORTHO05D009813 1.0e-33 147.5 176 47.2
C03p16960 Brassica napus HOM05D007751 ORTHO05D009813 1.3e-33 147.1 174 48.9
Carub.0008s1000 Capsella rubella HOM05D007751 ORTHO05D009813 1.3e-33 147.1 175 49.7
Aa31LG4G9710 Aethionema arabicum HOM05D007751 ORTHO05D009813 2.3e-33 146.4 124 60.5
Carub.0008s0999 Capsella rubella HOM05D007751 ORTHO05D009813 5.1e-33 145.2 173 49.7
AT5G50060 Arabidopsis thaliana HOM05D007751 ORTHO05D009813 1.9e-32 143.3 163 48.5
BolC8t48582H Brassica oleracea HOM05D007751 ORTHO05D009813 1.2e-31 140.6 122 62.3
Carub.0008s0997 Capsella rubella HOM05D007751 ORTHO05D009813 2.1e-31 139.8 175 46.9
A08p21410 Brassica napus HOM05D007751 ORTHO05D009813 6.2e-31 138.3 135 57.8
Aa31sc47G50 Aethionema arabicum HOM05D007751 ORTHO05D009813 6.8e-30 134.8 176 43.2
AL1G65530 Arabidopsis lyrata HOM05D007751 ORTHO05D009813 5.8e-29 131.7 136 54.4
Carub.0008s0998 Capsella rubella HOM05D007751 ORTHO05D009813 9.9e-29 131.0 177 46.9
BraA02t06621Z Brassica rapa HOM05D007751 ORTHO05D009813 2.9e-28 129.4 177 44.1
AT5G50050 Arabidopsis thaliana HOM05D007751 ORTHO05D009813 2.4e-27 126.3 177 46.9
C02p25780 Brassica napus HOM05D007751 ORTHO05D009813 3.2e-27 125.9 177 43.5
Carub.0002s0821 Capsella rubella HOM05D007751 ORTHO05D009813 9.2e-27 124.4 175 44.6
CARHR258620 Cardamine hirsuta HOM05D007751 ORTHO05D009813 1.3e-25 120.6 173 42.8
Carub.0008s1006 Capsella rubella HOM05D007751 ORTHO05D009813 1.7e-25 120.2 181 44.8
Carub.0008s1005 Capsella rubella HOM05D007751 ORTHO05D009813 3.3e-24 115.9 181 43.1
BolC2t08647H Brassica oleracea HOM05D007751 ORTHO05D009813 1.8e-22 110.2 145 44.8
BolC2t08679H Brassica oleracea HOM05D007751 ORTHO05D009813 4.0e-22 109.0 182 37.9
A01p20050 Brassica napus HOM05D007751 ORTHO05D009813 1.5e-21 107.1 182 37.4
BraA01t01929Z Brassica rapa HOM05D007751 ORTHO05D009813 2.0e-21 106.7 182 37.4
A02p15670 Brassica napus HOM05D007751 ORTHO05D009813 4.4e-21 105.5 182 37.4
BraA02t06629Z Brassica rapa HOM05D007751 ORTHO05D009813 4.4e-21 105.5 182 37.4
C02p26100 Brassica napus HOM05D007751 ORTHO05D009813 7.6e-21 104.8 182 36.8
BcaC03g15060 Brassica carinata HOM05D007751 ORTHO05D009813 4.9e-20 102.1 160 38.8
Carub.0008s1003 Capsella rubella HOM05D007751 ORTHO05D009813 5.6e-16 88.6 181 38.1
Carub.0002s0820 Capsella rubella HOM05D007751 ORTHO05D009813 1.6e-15 87.0 175 33.7
A02p15600 Brassica napus HOM05D007751 ORTHO05D009813 3.1e-14 82.8 126 38.1
BcaB01g02924 Brassica carinata HOM05D007751 ORTHO05D009813 1.2e-10 70.9 60 58.3
Carub.0008s1004 Capsella rubella HOM05D007751 ORTHO05D009813 2.1e-10 70.1 139 35.3
MD10G1032600 Malus domestica HOM05D004894 ORTHO05D005689 2.7e-10 69.7 118 32.2
BolC4t26309H Brassica oleracea HOM05D007751 ORTHO05D009813 1.8e-09 67.0 76 51.3
TWI34G1211 Tripterygium wilfordii HOM05D004894 ORTHO05D005689 3.7e-07 59.3 140 29.3
Lalb_Chr03g0035461 Lupinus albus HOM05D004894 ORTHO05D005689 8.1e-07 58.2 129 33.3
MD10G1032700 Malus domestica HOM05D004894 ORTHO05D005689 1.1e-06 57.8 136 26.5


User provided reference genes

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