Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT5G46915 Arabidopsis thaliana HOM05D007600 ORTHO05D009132 1.2e-161 573.2 289 100.0
AT2G16210 Arabidopsis thaliana HOM05D007600 ORTHO05D009132 4.3e-84 315.5 288 63.2
AL3G52300 Arabidopsis lyrata HOM05D007600 ORTHO05D009132 4.8e-75 285.4 287 58.5
Carub.0003s2950 Capsella rubella HOM05D007600 ORTHO05D009132 4.2e-63 245.7 295 51.5
AL6G20180 Arabidopsis lyrata HOM05D007600 ORTHO05D009132 2.4e-58 229.9 299 48.8
AL457U10020 Arabidopsis lyrata HOM05D007600 ORTHO05D009132 4.2e-55 219.2 298 48.3
Carub.0006s0819 Capsella rubella HOM05D007600 ORTHO05D009132 5.5e-55 218.8 293 46.1
AT2G35310 Arabidopsis thaliana HOM05D007600 ORTHO05D009132 3.7e-51 206.1 292 44.9
AT5G09780 Arabidopsis thaliana HOM05D007600 ORTHO05D009132 1.4e-45 187.6 306 43.5
Thhalv10022780m.g Eutrema salsugineum HOM05D007600 ORTHO05D009132 2.3e-45 186.8 304 40.5
CARHR291980 Cardamine hirsuta HOM05D007600 ORTHO05D009132 8.3e-43 178.3 307 39.7
Thhalv10023054m.g Eutrema salsugineum HOM05D007600 ORTHO05D009132 2.3e-37 160.2 252 43.3
CARHR106010 Cardamine hirsuta HOM05D007600 ORTHO05D009132 5.0e-32 142.5 281 37.4
Thhalv10014143m.g Eutrema salsugineum HOM05D007600 ORTHO05D009132 1.1e-29 134.8 306 35.6
CARHR195070 Cardamine hirsuta HOM05D007600 ORTHO05D009132 5.8e-28 129.0 301 32.6
Sp6g26220 Schrenkiella parvula HOM05D007600 ORTHO05D009132 1.3e-27 127.9 304 32.6
AL6G29100 Arabidopsis lyrata HOM05D007600 ORTHO05D009132 1.7e-27 127.5 293 35.2
Sp6g26290 Schrenkiella parvula HOM05D007600 ORTHO05D009132 2.9e-27 126.7 301 35.2
AT5G18000 Arabidopsis thaliana HOM05D007600 ORTHO05D009132 4.9e-27 125.9 293 34.5
AL6G29290 Arabidopsis lyrata HOM05D007600 ORTHO05D009132 2.4e-26 123.6 294 31.6
Thhalv10015705m.g Eutrema salsugineum HOM05D007600 ORTHO05D009132 9.2e-26 121.7 293 32.4
Aa31LG8G13300 Aethionema arabicum HOM05D007600 ORTHO05D009132 2.1e-25 120.6 301 32.9
AT5G18090 Arabidopsis thaliana HOM05D007600 ORTHO05D009132 2.7e-25 120.2 297 32.0
Carub.0006s1638 Capsella rubella HOM05D007600 ORTHO05D009132 4.6e-25 119.4 297 32.3
CARHR092260 Cardamine hirsuta HOM05D007600 ORTHO05D009132 1.1e-23 114.8 323 29.7
Sp3g15230 Schrenkiella parvula HOM05D007600 ORTHO05D009132 1.1e-23 114.8 322 31.1
A03p40020 Brassica napus HOM05D007600 ORTHO05D009132 4.3e-23 112.8 293 30.4
Thhalv10015617m.g Eutrema salsugineum HOM05D007600 ORTHO05D009132 5.6e-23 112.5 292 31.8
BcaC04g18726 Brassica carinata HOM05D007600 ORTHO05D009132 9.5e-23 111.7 303 31.7
BolC9t58734H Brassica oleracea HOM05D007600 ORTHO05D009132 9.5e-23 111.7 303 31.7
Carub.0003s2941 Capsella rubella HOM05D007600 ORTHO05D009132 9.5e-23 111.7 140 53.6
Thhalv10022138m.g Eutrema salsugineum HOM05D007600 ORTHO05D009132 9.5e-23 111.7 318 30.2
BcaB04g18922 Brassica carinata HOM05D007600 ORTHO05D009132 3.6e-22 109.8 321 29.9
A10p21410 Brassica napus HOM05D007600 ORTHO05D009132 8.1e-22 108.6 291 30.2
C09p58890 Brassica napus HOM05D007600 ORTHO05D009132 8.1e-22 108.6 302 31.5
BraA03t13149Z Brassica rapa HOM05D007600 ORTHO05D009132 3.1e-21 106.7 288 29.2
BcaB06g25788 Brassica carinata HOM05D007600 ORTHO05D009132 8.9e-21 105.1 288 29.2
BcaC01g03796 Brassica carinata HOM05D007600 ORTHO05D009132 8.9e-21 105.1 288 29.2
BolC3t17132H Brassica oleracea HOM05D007600 ORTHO05D009132 8.9e-21 105.1 288 29.2
BcaC07g38580 Brassica carinata HOM05D007600 ORTHO05D009132 1.5e-20 104.4 287 30.7
C03p48540 Brassica napus HOM05D007600 ORTHO05D009132 2.0e-20 104.0 288 29.2
CARHR037480 Cardamine hirsuta HOM05D007600 ORTHO05D009132 3.4e-20 103.2 181 42.0
BraA10t44204Z Brassica rapa HOM05D007600 ORTHO05D009132 7.6e-20 102.1 292 30.5
CARHR194980 Cardamine hirsuta HOM05D007600 ORTHO05D009132 9.9e-20 101.7 281 29.9
BraA03t13150Z Brassica rapa HOM05D007600 ORTHO05D009132 3.7e-19 99.8 292 29.1
AT3G17010 Arabidopsis thaliana HOM05D007600 ORTHO05D009132 4.9e-19 99.4 298 31.5
BcaB08g36708 Brassica carinata HOM05D007600 ORTHO05D009132 4.9e-19 99.4 302 29.8
A03p40010 Brassica napus HOM05D007600 ORTHO05D009132 6.4e-19 99.0 288 29.5
AL3G29990 Arabidopsis lyrata HOM05D007600 ORTHO05D009132 1.4e-18 97.8 306 31.0
C02p09570 Brassica napus HOM05D007600 ORTHO05D009132 1.9e-18 97.4 291 29.6
BcaC07g38617 Brassica carinata HOM05D007600 ORTHO05D009132 2.4e-18 97.1 268 29.9
BcaB04g18921 Brassica carinata HOM05D007600 ORTHO05D009132 7.1e-18 95.5 274 31.0
A05p32720 Brassica napus HOM05D007600 ORTHO05D009132 7.1e-18 95.5 301 28.9
BolC3t17133H Brassica oleracea HOM05D007600 ORTHO05D009132 1.2e-17 94.7 318 28.0
BolC2t06864H Brassica oleracea HOM05D007600 ORTHO05D009132 1.6e-17 94.4 294 29.3
A08p33850 Brassica napus HOM05D007600 ORTHO05D009132 2.1e-17 94.0 273 32.6
BraA08t35300Z Brassica rapa HOM05D007600 ORTHO05D009132 2.1e-17 94.0 273 32.6
BraA05t22094Z Brassica rapa HOM05D007600 ORTHO05D009132 2.7e-17 93.6 302 28.8
BcaC03g13563 Brassica carinata HOM05D007600 ORTHO05D009132 3.5e-17 93.2 292 29.5
BcaB05g23317 Brassica carinata HOM05D007600 ORTHO05D009132 4.6e-17 92.8 298 30.5
BraA02t05424Z Brassica rapa HOM05D007600 ORTHO05D009132 4.6e-17 92.8 291 28.2
BraA04t18175Z Brassica rapa HOM05D007600 ORTHO05D009132 4.6e-17 92.8 294 31.0
BcaB06g25793 Brassica carinata HOM05D007600 ORTHO05D009132 1.5e-15 87.8 309 27.8
Sp1g09320 Schrenkiella parvula HOM05D007600 ORTHO05D009132 1.9e-15 87.4 220 33.2
A02p04630 Brassica napus HOM05D007600 ORTHO05D009132 2.5e-15 87.0 291 27.1
Aa31LG11G11510 Aethionema arabicum HOM05D007600 ORTHO05D009132 4.3e-15 86.3 251 29.1
BcaC01g03795 Brassica carinata HOM05D007600 ORTHO05D009132 9.6e-15 85.1 311 26.0
C03p48550 Brassica napus HOM05D007600 ORTHO05D009132 1.2e-14 84.7 290 27.2
BolC4t27889H Brassica oleracea HOM05D007600 ORTHO05D009132 1.2e-14 84.7 283 31.8
C05p49420 Brassica napus HOM05D007600 ORTHO05D009132 6.2e-14 82.4 294 27.6
BolC5t33688H Brassica oleracea HOM05D007600 ORTHO05D009132 8.1e-14 82.0 295 27.5
BcaB04g18919 Brassica carinata HOM05D007600 ORTHO05D009132 1.2e-12 78.2 102 40.2
BolC8t49021H Brassica oleracea HOM05D007600 ORTHO05D009132 5.8e-12 75.9 243 30.5
A04p33230 Brassica napus HOM05D007600 ORTHO05D009132 2.2e-11 73.9 270 27.4
BcaB06g25789 Brassica carinata HOM05D007600 ORTHO05D009132 6.4e-11 72.4 206 29.6
Carub.0003s1676 Capsella rubella HOM05D007600 ORTHO05D009132 1.1e-10 71.6 276 27.5
BraA04t18782Z Brassica rapa HOM05D007600 ORTHO05D009132 1.9e-10 70.9 270 27.8
C04p70920 Brassica napus HOM05D007600 ORTHO05D009132 2.4e-10 70.5 256 27.0
BolC4t28592H Brassica oleracea HOM05D007600 ORTHO05D009132 2.4e-10 70.5 256 27.0
BcaC02g07741 Brassica carinata HOM05D007600 ORTHO05D009132 6.0e-09 65.9 102 37.3
Carub.0006s1619 Capsella rubella HOM05D007600 ORTHO05D009132 6.0e-09 65.9 239 28.0
THA.LOC104819596 Tarenaya hassleriana HOM05D007600 ORTHO05D009132 8.7e-08 62.0 282 25.2
A04p26690 Brassica napus HOM05D007600 ORTHO05D009132 1.6e-06 57.8 64 42.2
C08p13860 Brassica napus HOM05D007600 ORTHO05D009132 2.1e-06 57.4 181 32.0
BcaB06g29362 Brassica carinata HOM05D007600 ORTHO05D009132 4.8e-06 56.2 231 26.4
BcaC05g28837 Brassica carinata HOM05D007600 ORTHO05D009132 4.8e-06 56.2 235 25.5
C09p47210 Brassica napus HOM05D007600 ORTHO05D009132 4.8e-06 56.2 198 29.8
C04p64110 Brassica napus HOM05D007600 ORTHO05D009132 6.2e-06 55.8 64 40.6
Sp4g26250 Schrenkiella parvula HOM05D007600 ORTHO05D009132 8.1e-06 55.5 205 28.3


User provided reference genes

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