Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT5G46320 Arabidopsis thaliana HOM05D013731 ORTHO05D011863 5.1e-55 217.6 119 100.0
AL8G12110 Arabidopsis lyrata HOM05D013731 ORTHO05D011863 7.9e-40 167.2 132 74.2
Sp2g11170 Schrenkiella parvula HOM05D013731 ORTHO05D011863 3.4e-19 98.6 137 46.7
Carub.0008s0159 Capsella rubella HOM05D027938 ORTHO05D011863 7.7e-19 97.4 86 65.1
AL1G54120 Arabidopsis lyrata HOM05D016617 ORTHO05D011863 8.2e-13 77.4 120 44.2
Sp2g11160 Schrenkiella parvula HOM05D013731 ORTHO05D011863 8.2e-13 77.4 134 42.5
AT1G47760 Arabidopsis thaliana HOM05D016617 ORTHO05D011863 1.1e-12 77.0 113 43.4
Thhalv10001168m.g Eutrema salsugineum HOM05D013731 ORTHO05D011863 1.1e-12 77.0 127 40.2
Thhalv10001151m.g Eutrema salsugineum HOM05D013731 ORTHO05D011863 1.2e-11 73.6 127 39.4
BcaC06g31481 Brassica carinata HOM05D013731 ORTHO05D011863 5.9e-11 71.2 87 51.7
SpUn0037_0040 Schrenkiella parvula HOM05D027938 ORTHO05D011863 1.2e-08 63.5 82 45.1
Sp2g06850 Schrenkiella parvula HOM05D027938 ORTHO05D011863 2.1e-08 62.8 79 45.6
AL1G54190 Arabidopsis lyrata HOM05D016617 ORTHO05D011863 1.4e-07 60.1 113 39.8
Carub.0001s3675 Capsella rubella HOM05D016617 ORTHO05D011863 3.3e-06 55.5 114 35.1
Carub.0001s3667 Capsella rubella HOM05D016617 ORTHO05D011863 4.4e-06 55.1 114 33.3
Carub.0001s3661 Capsella rubella HOM05D016617 ORTHO05D011863 5.7e-06 54.7 114 33.3


User provided reference genes

Program Settings