Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT5G44150 Arabidopsis thaliana HOM05D006668 ORTHO05D008252 1.0e-183 646.7 356 100.0
AL8G15870 Arabidopsis lyrata HOM05D006668 ORTHO05D008252 1.8e-148 529.6 392 79.1
Carub.0008s0437 Capsella rubella HOM05D006668 ORTHO05D008252 2.3e-127 459.5 386 68.7
Sp2g08980 Schrenkiella parvula HOM05D006668 ORTHO05D008252 6.7e-119 431.4 406 68.0
CARHR179120 Cardamine hirsuta HOM05D006668 ORTHO05D008252 4.2e-113 412.1 367 64.9
Thhalv10003234m.g Eutrema salsugineum HOM05D006668 ORTHO05D008252 1.7e-109 400.2 379 68.9
BolC9t55549H Brassica oleracea HOM05D006668 ORTHO05D008252 3.7e-101 372.5 378 59.5
C09p26530 Brassica napus HOM05D006668 ORTHO05D008252 1.4e-100 370.5 378 59.3
BcaC04g21861 Brassica carinata HOM05D006668 ORTHO05D008252 1.6e-99 367.1 378 59.0
Aa31LG5G3090 Aethionema arabicum HOM05D006668 ORTHO05D008252 5.0e-98 362.1 429 55.0
A09p20930 Brassica napus HOM05D006668 ORTHO05D008252 1.0e-90 337.8 392 54.8
BraA09t37693Z Brassica rapa HOM05D006668 ORTHO05D008252 1.0e-90 337.8 392 54.8
BcaC06g31649 Brassica carinata HOM05D006668 ORTHO05D008252 1.1e-84 317.8 383 60.3
THA.LOC104801157 Tarenaya hassleriana HOM05D006668 ORTHO05D008252 1.1e-76 291.2 430 46.5
BcaC04g21859 Brassica carinata HOM05D006668 ORTHO05D008252 1.9e-52 210.7 183 66.1
Gorai.004G282700 Gossypium raimondii HOM05D006668 ORTHO05D008252 4.7e-48 196.1 420 36.4
Gohir.A08G243900 Gossypium hirsutum HOM05D006668 ORTHO05D008252 1.8e-47 194.1 420 34.5
Cpa.g.sc165.1 Carica papaya HOM05D006668 ORTHO05D008252 1.5e-46 191.0 434 35.5
Thecc.02G187500 Theobroma cacao HOM05D006668 ORTHO05D008252 2.0e-46 190.7 449 35.4
QL08p040692 Quercus lobata HOM05D006668 ORTHO05D008252 7.6e-46 188.7 446 35.9
Gohir.D08G264800 Gossypium hirsutum HOM05D006668 ORTHO05D008252 9.9e-46 188.3 420 36.2
Manes.12G086300 Manihot esculenta HOM05D006668 ORTHO05D008252 3.7e-45 186.4 438 36.1
CiPaw.03G182600 Carya illinoinensis HOM05D006668 ORTHO05D008252 1.1e-44 184.9 437 36.2
COL.COLO4_07343 Corchorus olitorius HOM05D006668 ORTHO05D008252 3.2e-44 183.3 218 50.9
Atru.chr6.2861 Acer truncatum HOM05D006668 ORTHO05D008252 7.1e-44 182.2 407 37.3
FvH4_5g30510 Fragaria vesca HOM05D006668 ORTHO05D008252 3.5e-43 179.9 426 34.7
Oeu036086.1 Olea europaea HOM05D006668 ORTHO05D008252 4.6e-43 179.5 420 35.5
FAN18G2410 Fragaria x ananassa HOM05D006668 ORTHO05D008252 7.8e-43 178.7 426 34.3
Duzib132G0616 Durio zibethinus HOM05D006668 ORTHO05D008252 1.3e-42 177.9 466 32.2
Ciclev10015198m.g Citrus clementina HOM05D006668 ORTHO05D008252 1.7e-42 177.6 469 34.5
GSVIVG01020613001 Vitis vinifera HOM05D006668 ORTHO05D008252 2.3e-42 177.2 446 35.0
DCAR_009761 Daucus carota HOM05D006668 ORTHO05D008252 3.0e-42 176.8 417 36.5
TAR627G0647 Trochodendron aralioides HOM05D006668 ORTHO05D008252 3.0e-42 176.8 453 34.7
Cfa014669 Carpinus fangiana HOM05D006668 ORTHO05D008252 3.9e-42 176.4 449 35.0
vmacro12351 Vaccinium macrocarpon HOM05D006668 ORTHO05D008252 5.1e-42 176.0 385 36.6
FAN08G3049 Fragaria x ananassa HOM05D006668 ORTHO05D008252 6.6e-42 175.6 425 34.8
Rhsim06G0136200 Rhododendron simsii HOM05D006668 ORTHO05D008252 6.6e-42 175.6 383 37.1
Hma1.2p1_0002F.1_g002330 Hydrangea macrophylla HOM05D006668 ORTHO05D008252 1.2e-40 171.4 475 33.1
arahy.Tifrunner.gnm1.ann1.Y4MWM5 Arachis hypogaea HOM05D006668 ORTHO05D008252 4.7e-40 169.5 231 46.8
FAN13G2061 Fragaria x ananassa HOM05D006668 ORTHO05D008252 6.2e-40 169.1 268 41.8
SalBow7G4646 Salvia bowleyana HOM05D006668 ORTHO05D008252 8.1e-40 168.7 395 34.7
Actinidia10993 Actinidia chinensis HOM05D006668 ORTHO05D008252 1.8e-39 167.5 471 32.3
Hma1.2p1_0002F.1_g002320 Hydrangea macrophylla HOM05D006668 ORTHO05D008252 5.2e-39 166.0 205 48.3
PGR142G0029 Punica granatum HOM05D006668 ORTHO05D008252 5.2e-39 166.0 426 34.5
TWI59G1373 Tripterygium wilfordii HOM05D006668 ORTHO05D008252 5.2e-39 166.0 434 35.7
Prupe.2G094200 Prunus persica HOM05D006668 ORTHO05D008252 6.8e-39 165.6 433 34.2
Glyma.12G119000 Glycine max HOM05D006668 ORTHO05D008252 8.9e-39 165.2 264 42.0
Glyma.06G287100 Glycine max HOM05D006668 ORTHO05D008252 1.2e-38 164.9 445 33.9
Lalb_Chr03g0029681 Lupinus albus HOM05D006668 ORTHO05D008252 2.6e-38 163.7 437 34.3
PSO541G3384 Papaver somniferum HOM05D006668 ORTHO05D008252 4.4e-38 162.9 457 34.6
RcHm_v2.0_Chr7g0225261 Rosa chinensis HOM05D006668 ORTHO05D008252 5.8e-38 162.5 434 31.6
CANSAT54G0862 Cannabis sativa HOM05D006668 ORTHO05D008252 9.9e-38 161.8 393 33.3
MD15G1126800 Malus domestica HOM05D006668 ORTHO05D008252 9.9e-38 161.8 412 33.5
PSO675G8266 Papaver somniferum HOM05D006668 ORTHO05D008252 9.9e-38 161.8 448 33.7
MELO3C018863.2 Cucumis melo HOM05D006668 ORTHO05D008252 2.2e-37 160.6 422 34.8
Peaxi162Scf00189g00018 Petunia axillaris HOM05D006668 ORTHO05D008252 9.3e-36 155.2 444 30.9
Sed0009608 Sechium edule HOM05D006668 ORTHO05D008252 9.3e-36 155.2 423 33.6
Psat7g136840 Pisum sativum HOM05D006668 ORTHO05D008252 1.2e-35 154.8 420 32.4
Medtr4g079100 Medicago truncatula HOM05D006668 ORTHO05D008252 4.6e-35 152.9 441 33.1
Aqoxy1G02297 Aquilegia oxysepala HOM05D006668 ORTHO05D008252 6.0e-35 152.5 479 30.5
Cc05_g07800 Coffea canephora HOM05D006668 ORTHO05D008252 7.8e-35 152.1 433 33.9
Lj3g0004052 Lotus japonicus HOM05D006668 ORTHO05D008252 1.0e-34 151.8 213 44.6
Nn1g06398 Nelumbo nucifera HOM05D006668 ORTHO05D008252 1.3e-34 151.4 221 44.3
CsaV3_7G003140 Cucumis sativus L. HOM05D006668 ORTHO05D008252 2.3e-34 150.6 417 32.6
ClCG00G003780 Citrullus lanatus HOM05D006668 ORTHO05D008252 3.0e-34 150.2 435 32.4
ClCG02G002300 Citrullus lanatus HOM05D006668 ORTHO05D008252 3.0e-34 150.2 435 32.4
Sc12g0003270 Simmondsia chinensis HOM05D006668 ORTHO05D008252 5.1e-34 149.4 417 31.7
Sopen07g027510 Solanum pennellii HOM05D006668 ORTHO05D008252 6.6e-34 149.1 420 31.4
VMungo0037G0001 Vigna mungo HOM05D006668 ORTHO05D008252 1.1e-33 148.3 437 32.3
Phvul.010G089800 Phaseolus vulgaris HOM05D006668 ORTHO05D008252 2.5e-33 147.1 217 46.5
Ca_18916_v3 Cicer arietinum L. HOM05D006668 ORTHO05D008252 3.3e-33 146.7 442 31.7
HanXRQChr17g0555041 Helianthus annuus HOM05D006668 ORTHO05D008252 9.6e-33 145.2 370 33.2
Lsat_1_v5_gn_8_69500 Lactuca sativa HOM05D006668 ORTHO05D008252 1.3e-32 144.8 381 35.2
Solyc07g053560.3 Solanum lycopersicum HOM05D006668 ORTHO05D008252 2.8e-32 143.7 414 31.2
SGA_v2.0_scaffold70G23480 Striga asiatica HOM05D006668 ORTHO05D008252 3.6e-32 143.3 416 31.7
MSTRG.5024 Avicennia marina HOM05D006668 ORTHO05D008252 1.1e-31 141.7 449 29.0
ECA232G0319 Erigeron canadensis HOM05D006668 ORTHO05D008252 1.1e-31 141.7 384 33.3
MBI06_g42697_MAGBIO Magnolia biondii HOM05D006668 ORTHO05D008252 1.4e-31 141.4 459 33.3
Migut.M00152 Erythranthe guttata HOM05D006668 ORTHO05D008252 5.3e-31 139.4 301 35.5
PGSC0003DMG400009383 Solanum tuberosum HOM05D006668 ORTHO05D008252 9.0e-31 138.7 435 31.0
Haze_13261 Corylus avellana HOM05D006668 ORTHO05D008252 1.2e-30 138.3 168 49.4
ClCG03G006150 Citrullus lanatus HOM05D006668 ORTHO05D008252 1.5e-30 137.9 430 28.8
TPR.G14253 Trifolium pratense HOM05D006668 ORTHO05D008252 1.5e-30 137.9 454 30.4
BcaB07g30967 Brassica carinata HOM05D006668 ORTHO05D008252 2.0e-30 137.5 308 38.6
SGA_v2.0_scaffold58G20553 Striga asiatica HOM05D006668 ORTHO05D008252 1.7e-29 134.4 409 31.5
CAN.G1808.7 Capsicum annuum HOM05D006668 ORTHO05D008252 6.4e-29 132.5 369 31.7
Potri.017G017200 Populus trichocarpa HOM05D006668 ORTHO05D008252 8.4e-29 132.1 288 35.1
CDE10G0622 Ceratophyllum demersum HOM05D006668 ORTHO05D008252 5.4e-28 129.4 403 29.8
HPP92_023281 Vanilla planifolia HOM05D006668 ORTHO05D008252 5.1e-26 122.9 437 33.0
Nitab4.5_0000621g0040 Nicotiana tabacum HOM05D006668 ORTHO05D008252 9.6e-25 118.6 413 29.8
Duzib248G1400 Durio zibethinus HOM05D006668 ORTHO05D008252 2.1e-24 117.5 289 34.3
AUR62036068 Chenopodium quinoa HOM05D006668 ORTHO05D008252 1.8e-23 114.4 279 33.7
Hund01006 Selenicereus undatus HOM05D006668 ORTHO05D008252 3.1e-23 113.6 456 28.3
Sabra17G0013400 Salix brachista HOM05D006668 ORTHO05D008252 5.3e-23 112.8 272 34.2
Eucgr.K01063 Eucalyptus grandis HOM05D006668 ORTHO05D008252 2.0e-22 110.9 447 28.6
Zm00001eb295870 Zea mays HOM05D006668 ORTHO05D008252 9.9e-22 108.6 320 29.1
EL10Ac9g20828 Beta vulgaris HOM05D006668 ORTHO05D008252 6.4e-21 105.9 303 31.4
Nitab4.5_0006091g0020 Nicotiana tabacum HOM05D006668 ORTHO05D008252 1.1e-20 105.1 412 26.7
Os05g0564000 Oryza sativa ssp. japonica HOM05D006668 ORTHO05D008252 1.1e-20 105.1 194 37.1
Oeu016899.1 Olea europaea HOM05D006668 ORTHO05D008252 1.2e-19 101.7 268 30.2
CSS0030364 Camellia sinensis var. sinensis HOM05D006668 ORTHO05D008252 1.1e-17 95.1 134 45.5
SEGI_30235 Sequoiadendron giganteum HOM05D006668 ORTHO05D008252 1.5e-17 94.7 200 33.5
Sed0015399 Sechium edule HOM05D006668 ORTHO05D008252 2.1e-16 90.9 389 27.5
CSS0015867 Camellia sinensis var. sinensis HOM05D006668 ORTHO05D008252 4.8e-16 89.7 131 44.3
Dinv06849 Davidia involucrata HOM05D006668 ORTHO05D008252 5.7e-09 66.2 268 29.9
Mapoly0050s0110 Marchantia polymorpha HOM05D006668 ORTHO05D008252 3.7e-08 63.5 223 25.6
ATR0602G285 Amborella trichopoda HOM05D006668 ORTHO05D008252 1.4e-07 61.6 106 40.6
Ah.01g015540 Amaranthus hybridus HOM05D006668 ORTHO05D008252 1.8e-07 61.2 157 32.5
Sabra07G0109400 Salix brachista HOM05D006668 ORTHO05D008252 1.5e-06 58.2 86 34.9
ATR0602G055 Amborella trichopoda HOM05D006668 ORTHO05D008252 2.6e-06 57.4 62 45.2


User provided reference genes

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