Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT5G43680 Arabidopsis thaliana HOM05D005370 ORTHO05D006659 3.6e-121 438.3 233 100.0
AL8G16570 Arabidopsis lyrata HOM05D005370 ORTHO05D006659 4.0e-112 408.3 233 94.0
Carub.0008s0497 Capsella rubella HOM05D005370 ORTHO05D006659 5.0e-107 391.3 233 90.1
BcaC06g31683 Brassica carinata HOM05D005370 ORTHO05D006659 4.9e-102 374.8 233 85.4
BcaC06g34636 Brassica carinata HOM05D005370 ORTHO05D006659 7.8e-100 367.5 233 84.1
BolC7t43153H Brassica oleracea HOM05D005370 ORTHO05D006659 7.8e-100 367.5 233 84.1
BraA06t27643Z Brassica rapa HOM05D005370 ORTHO05D006659 3.9e-99 365.2 233 82.8
CARHR179930 Cardamine hirsuta HOM05D005370 ORTHO05D006659 1.1e-98 363.6 237 85.2
C07p26250 Brassica napus HOM05D005370 ORTHO05D006659 3.6e-97 358.6 226 84.5
Sp2g08480 Schrenkiella parvula HOM05D005370 ORTHO05D006659 4.0e-96 355.1 236 82.2
A06p47750 Brassica napus HOM05D005370 ORTHO05D006659 6.8e-96 354.4 233 81.1
Thhalv10017901m.g Eutrema salsugineum HOM05D005370 ORTHO05D006659 2.5e-90 335.9 226 83.2
Aa31LG5G3560 Aethionema arabicum HOM05D005370 ORTHO05D006659 1.1e-66 257.3 224 67.0
Thhalv10003352m.g Eutrema salsugineum HOM05D005370 ORTHO05D006659 8.2e-49 198.0 157 73.2
MBI15_g19756_MAGBIO Magnolia biondii HOM05D005370 ORTHO05D006659 5.3e-48 195.3 230 51.7
GSVIVG01018102001 Vitis vinifera HOM05D005370 ORTHO05D006659 6.5e-46 188.3 229 49.8
QL06p015215 Quercus lobata HOM05D005370 ORTHO05D006659 1.9e-45 186.8 230 48.7
Gorai.005G046600 Gossypium raimondii HOM05D005370 ORTHO05D006659 5.5e-45 185.3 229 50.7
CiPaw.02G117200 Carya illinoinensis HOM05D005370 ORTHO05D006659 9.3e-45 184.5 229 48.5
Gohir.A02G035301 Gossypium hirsutum HOM05D005370 ORTHO05D006659 1.2e-44 184.1 229 50.2
Gohir.D02G042266 Gossypium hirsutum HOM05D005370 ORTHO05D006659 1.6e-44 183.7 229 50.2
Ciclev10006717m.g Citrus clementina HOM05D005370 ORTHO05D006659 4.6e-44 182.2 229 48.9
Manes.01G202000 Manihot esculenta HOM05D005370 ORTHO05D006659 1.5e-42 177.2 238 45.8
Aqoxy3G04193 Aquilegia oxysepala HOM05D005370 ORTHO05D006659 1.9e-42 176.8 232 47.0
Sabra02G0036500 Salix brachista HOM05D005370 ORTHO05D006659 1.9e-42 176.8 240 46.7
Nn3g19501 Nelumbo nucifera HOM05D005370 ORTHO05D006659 2.5e-42 176.4 236 47.5
Cfa018256 Carpinus fangiana HOM05D005370 ORTHO05D006659 3.3e-42 176.0 248 46.0
COL.COLO4_15774 Corchorus olitorius HOM05D005370 ORTHO05D006659 4.3e-42 175.6 229 46.7
RcHm_v2.0_Chr4g0389631 Rosa chinensis HOM05D005370 ORTHO05D006659 4.3e-42 175.6 229 45.4
CANSAT11G0223 Cannabis sativa HOM05D005370 ORTHO05D006659 5.7e-42 175.3 233 48.1
Potri.002G045500 Populus trichocarpa HOM05D005370 ORTHO05D006659 5.7e-42 175.3 241 46.9
TWI18G0973 Tripterygium wilfordii HOM05D005370 ORTHO05D006659 9.7e-42 174.5 230 45.7
MELO3C005475.2 Cucumis melo HOM05D005370 ORTHO05D006659 1.3e-41 174.1 238 48.7
Lsat_1_v5_gn_8_94841 Lactuca sativa HOM05D005370 ORTHO05D006659 1.3e-41 174.1 227 46.3
Prupe.1G175900 Prunus persica HOM05D005370 ORTHO05D006659 1.6e-41 173.7 230 46.5
Thecc.04G244800 Theobroma cacao HOM05D005370 ORTHO05D006659 2.2e-41 173.3 229 48.5
CANSAT11G2293 Cannabis sativa HOM05D005370 ORTHO05D006659 2.8e-41 172.9 232 47.4
Cc01_g08030 Coffea canephora HOM05D005370 ORTHO05D006659 3.7e-41 172.6 226 46.9
TWI12G0023 Tripterygium wilfordii HOM05D005370 ORTHO05D006659 3.7e-41 172.6 230 46.1
CsaV3_5G004690 Cucumis sativus L. HOM05D005370 ORTHO05D006659 4.8e-41 172.2 238 47.9
Migut.D00369 Erythranthe guttata HOM05D005370 ORTHO05D006659 4.8e-41 172.2 238 45.4
FvH4_4g02310 Fragaria vesca HOM05D005370 ORTHO05D006659 6.3e-41 171.8 227 45.8
SalBow4G0733 Salvia bowleyana HOM05D005370 ORTHO05D006659 6.3e-41 171.8 238 46.6
FAN17G2982 Fragaria x ananassa HOM05D005370 ORTHO05D006659 1.1e-40 171.0 230 44.8
Sed0023556 Sechium edule HOM05D005370 ORTHO05D006659 2.4e-40 169.9 233 45.5
CSS0021022 Camellia sinensis var. sinensis HOM05D005370 ORTHO05D006659 3.1e-40 169.5 231 46.8
Ca_14753_v3 Cicer arietinum L. HOM05D005370 ORTHO05D006659 5.3e-40 168.7 235 44.3
Ca_24537_v3 Cicer arietinum L. HOM05D005370 ORTHO05D006659 5.3e-40 168.7 235 44.3
AUR62032263 Chenopodium quinoa HOM05D005370 ORTHO05D006659 6.9e-40 168.3 247 43.7
EL10Ac5g10469 Beta vulgaris HOM05D005370 ORTHO05D006659 9.0e-40 167.9 247 44.5
FAN22G1699 Fragaria x ananassa HOM05D005370 ORTHO05D006659 3.4e-39 166.0 229 42.8
HPP92_015262 Vanilla planifolia HOM05D005370 ORTHO05D006659 3.4e-39 166.0 234 43.2
Phvul.007G177000 Phaseolus vulgaris HOM05D005370 ORTHO05D006659 7.6e-39 164.9 230 46.1
AUR62011949 Chenopodium quinoa HOM05D005370 ORTHO05D006659 1.0e-38 164.5 247 42.1
HanXRQChr02g0032381 Helianthus annuus HOM05D005370 ORTHO05D006659 1.0e-38 164.5 239 45.6
ECA236G0510 Erigeron canadensis HOM05D005370 ORTHO05D006659 1.3e-38 164.1 228 46.1
Lalb_Chr02g0142451 Lupinus albus HOM05D005370 ORTHO05D006659 1.3e-38 164.1 227 44.9
VMungo0720G0865 Vigna mungo HOM05D005370 ORTHO05D006659 1.3e-38 164.1 229 45.4
Peaxi162Scf00434g00622 Petunia axillaris HOM05D005370 ORTHO05D006659 1.7e-38 163.7 241 43.2
PSO210G0029 Papaver somniferum HOM05D005370 ORTHO05D006659 2.2e-38 163.3 237 43.5
ATR0665G285 Amborella trichopoda HOM05D005370 ORTHO05D006659 2.9e-38 162.9 231 43.3
Sopen04g034560 Solanum pennellii HOM05D005370 ORTHO05D006659 2.9e-38 162.9 253 43.5
Ah.11g050020 Amaranthus hybridus HOM05D005370 ORTHO05D006659 3.8e-38 162.5 247 44.1
Lj5g0014373 Lotus japonicus HOM05D005370 ORTHO05D006659 5.0e-38 162.2 226 44.7
PSO238G0055 Papaver somniferum HOM05D005370 ORTHO05D006659 6.5e-38 161.8 241 42.7
Solyc04g080950.3 Solanum lycopersicum HOM05D005370 ORTHO05D006659 8.5e-38 161.4 253 43.1
Cpa.g.sc58.39 Carica papaya HOM05D005370 ORTHO05D006659 1.4e-37 160.6 196 48.5
SGA_v2.0_scaffold580G53040 Striga asiatica HOM05D005370 ORTHO05D006659 1.2e-36 157.5 242 41.7
Hund02875 Selenicereus undatus HOM05D005370 ORTHO05D006659 6.1e-36 155.2 233 44.2
FAN12G2588 Fragaria x ananassa HOM05D005370 ORTHO05D006659 1.0e-35 154.5 212 44.8
SGA_v2.0_scaffold3169G54286 Striga asiatica HOM05D005370 ORTHO05D006659 1.0e-35 154.5 253 40.7
CDE07G1268 Ceratophyllum demersum HOM05D005370 ORTHO05D006659 1.3e-35 154.1 229 40.2
DCAR_023471 Daucus carota HOM05D005370 ORTHO05D006659 1.3e-35 154.1 231 44.2
arahy.Tifrunner.gnm1.ann1.XNPI4G Arachis hypogaea HOM05D005370 ORTHO05D006659 1.8e-35 153.7 238 44.1
CAN.G851.23 Capsicum annuum HOM05D005370 ORTHO05D006659 3.9e-35 152.5 265 40.8
PGSC0003DMG400003760 Solanum tuberosum HOM05D005370 ORTHO05D006659 5.1e-35 152.1 248 41.9
Duzib052G0322 Durio zibethinus HOM05D005370 ORTHO05D006659 8.7e-35 151.4 295 38.3
Haze_11274 Corylus avellana HOM05D005370 ORTHO05D006659 1.5e-34 150.6 207 46.9
DCAR_028371 Daucus carota HOM05D005370 ORTHO05D006659 4.3e-34 149.1 238 43.7
TAR362G0430 Trochodendron aralioides HOM05D005370 ORTHO05D006659 2.2e-33 146.7 215 43.3
Medtr1g070900 Medicago truncatula HOM05D005370 ORTHO05D006659 8.2e-33 144.8 229 40.2
Actinidia27521 Actinidia chinensis HOM05D005370 ORTHO05D006659 1.4e-32 144.1 234 40.6
arahy.Tifrunner.gnm1.ann1.7J2YFM Arachis hypogaea HOM05D005370 ORTHO05D006659 9.1e-32 141.4 246 41.5
MD04G1026200 Malus domestica HOM05D005370 ORTHO05D006659 1.5e-31 140.6 199 43.2
arahy.Tifrunner.gnm1.ann1.T9F7M4 Arachis hypogaea HOM05D005370 ORTHO05D006659 2.0e-31 140.2 210 43.8
Nn1g02548 Nelumbo nucifera HOM05D005370 ORTHO05D000069 2.6e-31 139.8 203 42.9
Sc24g0004270 Simmondsia chinensis HOM05D005370 ORTHO05D006659 1.0e-30 137.9 217 42.4
ClCG01G004480 Citrullus lanatus HOM05D005370 ORTHO05D006659 1.7e-30 137.1 206 47.1
Prupe.2G050700 Prunus persica HOM05D005370 ORTHO05D006659 2.5e-29 133.3 230 40.4
Oeu025788.2 Olea europaea HOM05D005370 ORTHO05D006659 5.5e-29 132.1 199 46.2
Glyma.10G031500 Glycine max HOM05D005370 ORTHO05D006659 7.9e-28 128.3 228 39.5
Dinv22486 Davidia involucrata HOM05D005370 ORTHO05D006659 1.1e-26 124.4 203 38.9
MSTRG.18281 Avicennia marina HOM05D005370 ORTHO05D006659 4.4e-26 122.5 144 49.3
Mapoly0029s0143 Marchantia polymorpha HOM05D005370 ORTHO05D006659 1.1e-24 117.9 253 34.4
CDE03G0266 Ceratophyllum demersum HOM05D005370 ORTHO05D006659 2.4e-24 116.7 197 37.6
Haze_21184 Corylus avellana HOM05D005370 ORTHO05D006659 4.1e-24 115.9 288 34.0
TPR.G39035 Trifolium pratense HOM05D005370 ORTHO05D000069 4.1e-24 115.9 115 54.8
Psat3g119240 Pisum sativum HOM05D005370 ORTHO05D006659 5.3e-24 115.5 226 38.1
SGA_v2.0_scaffold138G35287 Striga asiatica HOM05D005370 ORTHO05D006659 2.6e-23 113.2 209 38.3
Pp3c17_23420 Physcomitrium patens HOM05D005370 ORTHO05D006659 7.7e-23 111.7 246 33.7
Psat5g092160 Pisum sativum HOM05D009633 ORTHO05D011907 1.0e-22 111.3 110 53.6
Glyma.02G142900 Glycine max HOM05D005370 ORTHO05D006659 2.9e-22 109.8 98 60.2
Nitab4.5_0001840g0120 Nicotiana tabacum HOM05D005370 ORTHO05D006659 6.5e-22 108.6 111 53.2
Nitab4.5_0002156g0030 Nicotiana tabacum HOM05D005370 ORTHO05D006659 6.5e-22 108.6 111 53.2
PGSC0003DMG400017885 Solanum tuberosum HOM05D005370 ORTHO05D006659 1.9e-21 107.1 111 53.2
Zm00001eb201750 Zea mays HOM05D005370 ORTHO05D006659 7.2e-21 105.1 261 33.0
Nitab4.5_0001903g0040 Nicotiana tabacum HOM05D005370 ORTHO05D006659 9.4e-21 104.8 109 49.5
Prupe.1G027700 Prunus persica HOM05D005370 ORTHO05D006659 3.7e-17 92.8 173 39.9
CBR_g32014 Chara braunii HOM05D005370 ORTHO05D006659 1.8e-16 90.5 258 29.8
SGA_v2.0_scaffold1G00551 Striga asiatica HOM05D006471 ORTHO05D008157 2.0e-15 87.0 101 48.5
Nitab4.5_0001423g0070 Nicotiana tabacum HOM05D005370 ORTHO05D006659 2.6e-15 86.7 280 30.4
Cc01_g05510 Coffea canephora HOM05D005370 ORTHO05D006659 5.0e-14 82.4 62 66.1
Psat1g083920 Pisum sativum HOM05D005370 ORTHO05D006659 5.0e-14 82.4 164 37.8
Psat0s8363g0040 Pisum sativum HOM05D005370 ORTHO05D006659 1.1e-13 81.3 164 37.2
Nitab4.5_0004235g0010 Nicotiana tabacum HOM05D005370 ORTHO05D006659 1.9e-13 80.5 62 59.7
Sopen01g042090 Solanum pennellii HOM05D005370 ORTHO05D006659 4.2e-13 79.3 165 38.2
Os11g0550900 Oryza sativa ssp. japonica HOM05D005370 ORTHO05D006659 5.5e-13 79.0 245 27.3
Eucgr.G02606 Eucalyptus grandis HOM05D005370 ORTHO05D006659 7.2e-13 78.6 171 35.1
SEGI_11901 Sequoiadendron giganteum HOM05D005370 ORTHO05D006659 1.2e-12 77.8 62 58.1
Psat3g119360 Pisum sativum HOM05D005370 ORTHO05D006659 3.6e-12 76.3 50 70.0
Nn8g40523 Nelumbo nucifera HOM05D005370 ORTHO05D006659 5.2e-11 72.4 99 44.4
AagrBONN_evm.TU.Sc2ySwM_228.5248 Anthoceros agrestis HOM05D005370 ORTHO05D006659 6.7e-11 72.0 219 29.7
Actinidia19979 Actinidia chinensis HOM05D005370 ORTHO05D006659 8.8e-11 71.6 99 44.4
Duzib212G0616 Durio zibethinus HOM05D005370 ORTHO05D006659 5.7e-10 68.9 165 33.9
SMO116G0410 Selaginella moellendorffii HOM05D005370 ORTHO05D006659 7.5e-10 68.6 221 27.1
Cc01_g05520 Coffea canephora HOM05D005370 ORTHO05D006659 2.2e-09 67.0 94 42.6
MBI11_g15920_MAGBIO Magnolia biondii HOM05D005370 ORTHO05D006659 1.4e-08 64.3 130 39.2
Psat3g119160 Pisum sativum HOM05D005370 ORTHO05D006659 2.7e-07 60.1 159 30.8
Solyc01g098540.3 Solanum lycopersicum HOM05D005370 ORTHO05D006659 7.7e-07 58.5 62 50.0
SEGI_21191 Sequoiadendron giganteum HOM05D005370 ORTHO05D006659 3.8e-06 56.2 118 37.3


User provided reference genes

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