Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT5G43068 Arabidopsis thaliana HOM05D010467 ORTHO05D012550 4.6e-36 154.1 80 100.0
Sp2g07840 Schrenkiella parvula HOM05D010467 ORTHO05D012550 1.0e-22 109.8 82 73.2
Thhalv10003345m.g Eutrema salsugineum HOM05D010467 ORTHO05D012550 1.7e-22 109.0 81 71.6
Carub.0008s0567 Capsella rubella HOM05D010467 ORTHO05D012550 3.8e-22 107.8 81 74.1
BcaC06g31729 Brassica carinata HOM05D010467 ORTHO05D012550 6.1e-20 100.5 81 67.9
BcaC02g10818 Brassica carinata HOM05D010467 ORTHO05D012550 1.4e-19 99.4 81 66.7
C04p24900 Brassica napus HOM05D010467 ORTHO05D012550 1.4e-19 99.4 81 66.7
BolC4t23990H Brassica oleracea HOM05D010467 ORTHO05D012550 1.4e-19 99.4 81 66.7
AL8G17670 Arabidopsis lyrata HOM05D010467 ORTHO05D012550 3.0e-19 98.2 82 67.1
C09p25570 Brassica napus HOM05D010467 ORTHO05D012550 5.1e-19 97.4 82 67.1
BolC9t55457H Brassica oleracea HOM05D010467 ORTHO05D012550 5.1e-19 97.4 82 67.1
BcaC04g21947 Brassica carinata HOM05D010467 ORTHO05D012550 1.1e-18 96.3 82 65.9
A09p20180 Brassica napus HOM05D010467 ORTHO05D012550 1.1e-18 96.3 82 65.9
BraA09t37629Z Brassica rapa HOM05D010467 ORTHO05D012550 1.1e-18 96.3 82 65.9
AT5G43066 Arabidopsis thaliana HOM05D010467 ORTHO05D012550 1.7e-17 92.4 80 65.0
AT5G43064 Arabidopsis thaliana HOM05D010467 ORTHO05D012550 6.3e-17 90.5 80 65.0
AL8G17660 Arabidopsis lyrata HOM05D010467 ORTHO05D012550 1.1e-16 89.7 67 74.6
AL8G17680 Arabidopsis lyrata HOM05D010467 ORTHO05D012550 1.1e-16 89.7 80 65.0
CARHR180930 Cardamine hirsuta HOM05D010467 ORTHO05D012550 1.0e-14 83.2 86 61.6
Carub.0008s0566 Capsella rubella HOM05D010467 ORTHO05D012550 1.7e-14 82.4 81 65.4
Aa31LG9G13180 Aethionema arabicum HOM05D010467 ORTHO05D012550 2.4e-08 62.0 81 46.9
BcaB04g17547 Brassica carinata HOM05D011746 ORTHO05D013740 3.5e-07 58.2 90 45.6
Sp1g34310 Schrenkiella parvula HOM05D011746 ORTHO05D013740 1.0e-06 56.6 88 43.2
A08p05950 Brassica napus HOM05D011746 ORTHO05D013740 3.8e-06 54.7 88 44.3
BraA08t32596Z Brassica rapa HOM05D011746 ORTHO05D013740 3.8e-06 54.7 88 44.3
CARHR036690 Cardamine hirsuta HOM05D011746 ORTHO05D013740 3.8e-06 54.7 88 45.5
BcaC07g37239 Brassica carinata HOM05D011746 ORTHO05D013740 5.0e-06 54.3 88 43.2
C08p06610 Brassica napus HOM05D011746 ORTHO05D013740 5.0e-06 54.3 88 43.2
BolC8t47504H Brassica oleracea HOM05D011746 ORTHO05D013740 5.0e-06 54.3 88 43.2
THA.LOC109116703 Tarenaya hassleriana HOM05D011746 ORTHO05D013740 6.5e-06 53.9 92 41.3


User provided reference genes

Program Settings